RNA–Protein interactions for RNA: ENST00000505712.5

LINC01339-201, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 2 BASIC

Gene LINC01339, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-201ENST00000505712 LINC01559Q495D7 138 aa9.72□□□□□ -0.85
LINC01339-201ENST00000505712 ZNF511Q8NB15 262 aa9.72□□□□□ -0.85
LINC01339-201ENST00000505712 BAP1Q92560 729 aa9.72□□□□□ -0.85
LINC01339-201ENST00000505712 WASF2Q9Y6W5 498 aa9.72□□□□□ -0.85
LINC01339-201ENST00000505712 MYSM1Q5VVJ2 828 aa9.71□□□□□ -0.86
LINC01339-201ENST00000505712 SENP2Q9HC62 589 aa9.71□□□□□ -0.86
LINC01339-201ENST00000505712 DCAF1Q9Y4B6 1507 aa9.71□□□□□ -0.86
LINC01339-201ENST00000505712 CSPP1Q1MSJ5 1256 aa9.7□□□□□ -0.86
LINC01339-201ENST00000505712 TUSC1Q2TAM9 212 aa9.7□□□□□ -0.86
LINC01339-201ENST00000505712 CABLES1Q8TDN4 633 aa9.7□□□□□ -0.86
LINC01339-201ENST00000505712 VARSP26640 1264 aaKnown RBP9.69□□□□□ -0.86
LINC01339-201ENST00000505712 NUTM2BA6NNL0 878 aaPredicted RBP9.68□□□□□ -0.86
LINC01339-201ENST00000505712 NUTM2EB1AL46 878 aaPredicted RBP9.68□□□□□ -0.86
LINC01339-201ENST00000505712 NUTM2DQ5VT03 806 aaPredicted RBP9.68□□□□□ -0.86
LINC01339-201ENST00000505712 TREML4Q6UXN2 200 aa9.68□□□□□ -0.86
LINC01339-201ENST00000505712 NUTM2AQ8IVF1 878 aaPredicted RBP9.68□□□□□ -0.86
LINC01339-201ENST00000505712 TRIM47Q96LD4 638 aa9.68□□□□□ -0.86
LINC01339-201ENST00000505712 LIMD1Q9UGP4 676 aa9.68□□□□□ -0.86
LINC01339-201ENST00000505712 PLEKHG3A1L390 1219 aa9.67□□□□□ -0.86
LINC01339-201ENST00000505712 F12P00748 615 aaPredicted RBP9.67□□□□□ -0.86
LINC01339-201ENST00000505712 KIFC2Q96AC6 838 aa9.67□□□□□ -0.86
LINC01339-201ENST00000505712 RSPH6AQ9H0K4 717 aa9.67□□□□□ -0.86
LINC01339-201ENST00000505712 MPNDQ8N594 471 aa9.66□□□□□ -0.86
LINC01339-201ENST00000505712 TSC1Q92574 1164 aa9.66□□□□□ -0.86
LINC01339-201ENST00000505712 MAP10Q9P2G4 905 aa9.66□□□□□ -0.86
LINC01339-201ENST00000505712 TLL2Q9Y6L7 1015 aa9.66□□□□□ -0.86
LINC01339-201ENST00000505712 LILRB3O75022 631 aa9.65□□□□□ -0.86
LINC01339-201ENST00000505712 CLK2P49760 499 aaKnown RBP9.65□□□□□ -0.86
LINC01339-201ENST00000505712 QPCTQ16769 361 aa9.65□□□□□ -0.86
LINC01339-201ENST00000505712 CAPN5O15484 640 aaPredicted RBP9.64□□□□□ -0.87
LINC01339-201ENST00000505712 SNRPBP14678 240 aaKnown RBP9.64□□□□□ -0.87
LINC01339-201ENST00000505712 HELBQ8NG08 1087 aaPredicted RBP9.64□□□□□ -0.87
LINC01339-201ENST00000505712 FAM174AQ8TBP5 190 aa9.64□□□□□ -0.87
LINC01339-201ENST00000505712 PER1O15534 1290 aaPredicted RBP9.62□□□□□ -0.87
LINC01339-201ENST00000505712 SCRIBQ14160 1630 aa9.61□□□□□ -0.87
LINC01339-201ENST00000505712 WFS1O76024 890 aa9.61□□□□□ -0.87
LINC01339-201ENST00000505712 NNTQ13423 1086 aa9.61□□□□□ -0.87
LINC01339-201ENST00000505712 LCE2AQ5TA79 106 aaPredicted RBP9.61□□□□□ -0.87
LINC01339-201ENST00000505712 ARMC2Q8NEN0 867 aa9.61□□□□□ -0.87
LINC01339-201ENST00000505712 BCANQ96GW7 911 aa9.61□□□□□ -0.87
LINC01339-201ENST00000505712 AGERQ15109 404 aa9.6□□□□□ -0.87
LINC01339-201ENST00000505712 BPHLQ86WA6 291 aaPredicted RBP9.6□□□□□ -0.87
LINC01339-201ENST00000505712 FOXJ1Q92949 421 aa9.6□□□□□ -0.87
LINC01339-201ENST00000505712 ADH1CP00326 375 aa9.59□□□□□ -0.87
LINC01339-201ENST00000505712 BMP1P13497 986 aa9.59□□□□□ -0.87
LINC01339-201ENST00000505712 RTL5Q5HYW3 569 aaPredicted RBP9.59□□□□□ -0.87
LINC01339-201ENST00000505712 POLR3EQ9NVU0 708 aa9.59□□□□□ -0.87
LINC01339-201ENST00000505712 SHROOM4Q9ULL8 1493 aa9.59□□□□□ -0.87
LINC01339-201ENST00000505712 NBPF14Q5TI25 921 aa9.58□□□□□ -0.88
LINC01339-201ENST00000505712 TRIM46Q7Z4K8 759 aa9.58□□□□□ -0.88
LINC01339-201ENST00000505712 CDK15Q96Q40 435 aa9.58□□□□□ -0.88
LINC01339-201ENST00000505712 NFX1Q12986 1120 aaKnown RBP9.57□□□□□ -0.88
LINC01339-201ENST00000505712 ARID5BQ14865 1188 aa9.56□□□□□ -0.88
LINC01339-201ENST00000505712 TERTO14746 1132 aaKnown RBP9.55□□□□□ -0.88
LINC01339-201ENST00000505712 DDRGK1Q96HY6 314 aa9.55□□□□□ -0.88
LINC01339-201ENST00000505712 KDM4CQ9H3R0 1056 aa9.55□□□□□ -0.88
LINC01339-201ENST00000505712 TIMP2P16035 220 aa9.54□□□□□ -0.88
LINC01339-201ENST00000505712 WDR4P57081 412 aaKnown RBP9.54□□□□□ -0.88
LINC01339-201ENST00000505712 NR5A1Q13285 461 aa9.54□□□□□ -0.88
LINC01339-201ENST00000505712 C4orf48Q5BLP8 95 aa9.54□□□□□ -0.88
LINC01339-201ENST00000505712 SKIV2LQ15477 1246 aaKnown RBP9.53□□□□□ -0.88
LINC01339-201ENST00000505712 SH3D19Q5HYK7 790 aa9.53□□□□□ -0.88
LINC01339-201ENST00000505712 GPKOWQ92917 476 aaPredicted RBP eCLIP9.53□□□□□ -0.88
LINC01339-201ENST00000505712 SCARF1Q14162 830 aa9.52□□□□□ -0.89
LINC01339-201ENST00000505712 SH3RF1Q7Z6J0 888 aa9.52□□□□□ -0.89
LINC01339-201ENST00000505712 C1QTNF2Q9BXJ5 285 aa9.52□□□□□ -0.89
LINC01339-201ENST00000505712 GPBP1L1Q9HC44 474 aaPredicted RBP9.52□□□□□ -0.89
LINC01339-201ENST00000505712 MRPL14Q6P1L8 145 aaKnown RBP9.51□□□□□ -0.89
LINC01339-201ENST00000505712 ZFP42Q96MM3 310 aa9.51□□□□□ -0.89
LINC01339-201ENST00000505712 KLF16Q9BXK1 252 aaPredicted RBP9.51□□□□□ -0.89
LINC01339-201ENST00000505712 SLC24A1O60721 1099 aa9.5□□□□□ -0.89
LINC01339-201ENST00000505712 CTDSPL2Q05D32 466 aa9.5□□□□□ -0.89
LINC01339-201ENST00000505712 SH3BP5LQ7L8J4 393 aa9.5□□□□□ -0.89
LINC01339-201ENST00000505712 TRMT44Q8IYL2 757 aaKnown RBP9.5□□□□□ -0.89
LINC01339-201ENST00000505712 FAM117AQ9C073 453 aa9.5□□□□□ -0.89
LINC01339-201ENST00000505712 ATP1B4Q9UN42 357 aaPredicted RBP9.5□□□□□ -0.89
LINC01339-201ENST00000505712 MAP4K5Q9Y4K4 846 aa9.5□□□□□ -0.89
LINC01339-201ENST00000505712 MAGEB6P1A0A0J9YX57 407 aa9.49□□□□□ -0.89
LINC01339-201ENST00000505712 WIPF1O43516 503 aa9.49□□□□□ -0.89
LINC01339-201ENST00000505712 ZIC2O95409 532 aaPredicted RBP9.49□□□□□ -0.89
LINC01339-201ENST00000505712 NR3C2P08235 984 aa9.49□□□□□ -0.89
LINC01339-201ENST00000505712 GRM5P41594 1212 aa9.49□□□□□ -0.89
LINC01339-201ENST00000505712 SLC16A10Q8TF71 515 aa9.49□□□□□ -0.89
LINC01339-201ENST00000505712 NXF1Q9UBU9 619 aaKnown RBP9.49□□□□□ -0.89
LINC01339-201ENST00000505712 NPAS3Q8IXF0 933 aa9.48□□□□□ -0.89
LINC01339-201ENST00000505712 CC2D2AQ9P2K1 1620 aa9.48□□□□□ -0.89
LINC01339-201ENST00000505712 EIF4G1Q04637 1599 aaKnown RBP9.47□□□□□ -0.89
LINC01339-201ENST00000505712 FSHRP23945 695 aa9.47□□□□□ -0.89
LINC01339-201ENST00000505712 PPP2R2DQ66LE6 453 aa9.47□□□□□ -0.89
LINC01339-201ENST00000505712 VASH1Q7L8A9 365 aaPredicted RBP9.47□□□□□ -0.89
LINC01339-201ENST00000505712 ITPKCQ96DU7 683 aa9.47□□□□□ -0.89
LINC01339-201ENST00000505712 PURBQ96QR8 312 aaKnown RBP9.47□□□□□ -0.89
LINC01339-201ENST00000505712 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.47□□□□□ -0.89
LINC01339-201ENST00000505712 CARD14Q9BXL6 1004 aa9.47□□□□□ -0.89
LINC01339-201ENST00000505712 ZFAND3Q9H8U3 227 aa9.47□□□□□ -0.89
LINC01339-201ENST00000505712 INSM1Q01101 510 aaPredicted RBP9.46□□□□□ -0.9
LINC01339-201ENST00000505712 PROCA1Q8NCQ7 364 aaPredicted RBP9.46□□□□□ -0.9
LINC01339-201ENST00000505712 FKBPLQ9UIM3 349 aa9.46□□□□□ -0.9
LINC01339-201ENST00000505712 PDXDC2PQ6P474 469 aa9.45□□□□□ -0.9
LINC01339-201ENST00000505712 LRRN4Q8WUT4 740 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms