RNA–Protein interactions for RNA: ENST00000473797.1

GPCPD1-204, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-204ENST00000473797 TREML4Q6UXN2 200 aa9.65□□□□□ -0.86
GPCPD1-204ENST00000473797 CABLES1Q8TDN4 633 aa9.65□□□□□ -0.86
GPCPD1-204ENST00000473797 TRIM47Q96LD4 638 aa9.64□□□□□ -0.87
GPCPD1-204ENST00000473797 SENP2Q9HC62 589 aa9.64□□□□□ -0.87
GPCPD1-204ENST00000473797 LINC01559Q495D7 138 aa9.63□□□□□ -0.87
GPCPD1-204ENST00000473797 CTHP32929 405 aa9.62□□□□□ -0.87
GPCPD1-204ENST00000473797 QPCTQ16769 361 aa9.62□□□□□ -0.87
GPCPD1-204ENST00000473797 RSPH6AQ9H0K4 717 aa9.62□□□□□ -0.87
GPCPD1-204ENST00000473797 WASF2Q9Y6W5 498 aa9.62□□□□□ -0.87
GPCPD1-204ENST00000473797 PLEKHG3A1L390 1219 aa9.61□□□□□ -0.87
GPCPD1-204ENST00000473797 KIFC2Q96AC6 838 aa9.61□□□□□ -0.87
GPCPD1-204ENST00000473797 PER1O15534 1290 aaPredicted RBP9.6□□□□□ -0.87
GPCPD1-204ENST00000473797 MAP10Q9P2G4 905 aa9.6□□□□□ -0.87
GPCPD1-204ENST00000473797 SNRPBP14678 240 aaKnown RBP9.59□□□□□ -0.87
GPCPD1-204ENST00000473797 CSPP1Q1MSJ5 1256 aa9.59□□□□□ -0.87
GPCPD1-204ENST00000473797 CDK15Q96Q40 435 aa9.59□□□□□ -0.87
GPCPD1-204ENST00000473797 NUTM2BA6NNL0 878 aaPredicted RBP9.58□□□□□ -0.88
GPCPD1-204ENST00000473797 NUTM2EB1AL46 878 aaPredicted RBP9.58□□□□□ -0.88
GPCPD1-204ENST00000473797 CLK2P49760 499 aaKnown RBP9.58□□□□□ -0.88
GPCPD1-204ENST00000473797 NFX1Q12986 1120 aaKnown RBP9.58□□□□□ -0.88
GPCPD1-204ENST00000473797 NUTM2DQ5VT03 806 aaPredicted RBP9.58□□□□□ -0.88
GPCPD1-204ENST00000473797 NUTM2AQ8IVF1 878 aaPredicted RBP9.58□□□□□ -0.88
GPCPD1-204ENST00000473797 CAPN5O15484 640 aaPredicted RBP9.57□□□□□ -0.88
GPCPD1-204ENST00000473797 RTL5Q5HYW3 569 aaPredicted RBP9.57□□□□□ -0.88
GPCPD1-204ENST00000473797 FAM174AQ8TBP5 190 aa9.57□□□□□ -0.88
GPCPD1-204ENST00000473797 TLL2Q9Y6L7 1015 aa9.57□□□□□ -0.88
GPCPD1-204ENST00000473797 TRIM46Q7Z4K8 759 aa9.56□□□□□ -0.88
GPCPD1-204ENST00000473797 ARMC2Q8NEN0 867 aa9.56□□□□□ -0.88
GPCPD1-204ENST00000473797 FOXJ1Q92949 421 aa9.56□□□□□ -0.88
GPCPD1-204ENST00000473797 KLF16Q9BXK1 252 aaPredicted RBP9.56□□□□□ -0.88
GPCPD1-204ENST00000473797 WFS1O76024 890 aa9.55□□□□□ -0.88
GPCPD1-204ENST00000473797 HELBQ8NG08 1087 aaPredicted RBP9.55□□□□□ -0.88
GPCPD1-204ENST00000473797 BCANQ96GW7 911 aa9.55□□□□□ -0.88
GPCPD1-204ENST00000473797 ADH1CP00326 375 aa9.54□□□□□ -0.88
GPCPD1-204ENST00000473797 NNTQ13423 1086 aa9.54□□□□□ -0.88
GPCPD1-204ENST00000473797 C4orf48Q5BLP8 95 aa9.54□□□□□ -0.88
GPCPD1-204ENST00000473797 BPHLQ86WA6 291 aaPredicted RBP9.54□□□□□ -0.88
GPCPD1-204ENST00000473797 SKIV2LQ15477 1246 aaKnown RBP9.53□□□□□ -0.88
GPCPD1-204ENST00000473797 SH3RF1Q7Z6J0 888 aa9.53□□□□□ -0.88
GPCPD1-204ENST00000473797 POLR3EQ9NVU0 708 aa9.53□□□□□ -0.88
GPCPD1-204ENST00000473797 TERTO14746 1132 aaKnown RBP9.52□□□□□ -0.89
GPCPD1-204ENST00000473797 C1QTNF2Q9BXJ5 285 aa9.52□□□□□ -0.89
GPCPD1-204ENST00000473797 WIPF1O43516 503 aa9.51□□□□□ -0.89
GPCPD1-204ENST00000473797 TIMP2P16035 220 aa9.51□□□□□ -0.89
GPCPD1-204ENST00000473797 GRM5P41594 1212 aa9.51□□□□□ -0.89
GPCPD1-204ENST00000473797 NR5A1Q13285 461 aa9.51□□□□□ -0.89
GPCPD1-204ENST00000473797 SH3D19Q5HYK7 790 aa9.51□□□□□ -0.89
GPCPD1-204ENST00000473797 TSC1Q92574 1164 aa9.51□□□□□ -0.89
GPCPD1-204ENST00000473797 KDM4CQ9H3R0 1056 aa9.51□□□□□ -0.89
GPCPD1-204ENST00000473797 BMP1P13497 986 aa9.5□□□□□ -0.89
GPCPD1-204ENST00000473797 PPP2R2DQ66LE6 453 aa9.5□□□□□ -0.89
GPCPD1-204ENST00000473797 SH3BP5LQ7L8J4 393 aa9.5□□□□□ -0.89
GPCPD1-204ENST00000473797 GPKOWQ92917 476 aaPredicted RBP eCLIP9.5□□□□□ -0.89
GPCPD1-204ENST00000473797 DDRGK1Q96HY6 314 aa9.5□□□□□ -0.89
GPCPD1-204ENST00000473797 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.5□□□□□ -0.89
GPCPD1-204ENST00000473797 NBPF14Q5TI25 921 aa9.49□□□□□ -0.89
GPCPD1-204ENST00000473797 TRMT44Q8IYL2 757 aaKnown RBP9.49□□□□□ -0.89
GPCPD1-204ENST00000473797 CTDSPL2Q05D32 466 aa9.48□□□□□ -0.89
GPCPD1-204ENST00000473797 LCE2CQ5TA81 110 aa9.48□□□□□ -0.89
GPCPD1-204ENST00000473797 FAM117AQ9C073 453 aa9.48□□□□□ -0.89
GPCPD1-204ENST00000473797 GPBP1L1Q9HC44 474 aaPredicted RBP9.48□□□□□ -0.89
GPCPD1-204ENST00000473797 MAP4K5Q9Y4K4 846 aa9.48□□□□□ -0.89
GPCPD1-204ENST00000473797 WDR4P57081 412 aaKnown RBP9.47□□□□□ -0.89
GPCPD1-204ENST00000473797 AGERQ15109 404 aa9.47□□□□□ -0.89
GPCPD1-204ENST00000473797 NPAS3Q8IXF0 933 aa9.47□□□□□ -0.89
GPCPD1-204ENST00000473797 ZFP42Q96MM3 310 aa9.47□□□□□ -0.89
GPCPD1-204ENST00000473797 FBXO31Q5XUX0 539 aaPredicted RBP9.46□□□□□ -0.9
GPCPD1-204ENST00000473797 MRPL14Q6P1L8 145 aaKnown RBP9.46□□□□□ -0.9
GPCPD1-204ENST00000473797 NXF1Q9UBU9 619 aaKnown RBP9.46□□□□□ -0.9
GPCPD1-204ENST00000473797 NR3C2P08235 984 aa9.45□□□□□ -0.9
GPCPD1-204ENST00000473797 ARID5BQ14865 1188 aa9.45□□□□□ -0.9
GPCPD1-204ENST00000473797 PROCA1Q8NCQ7 364 aaPredicted RBP9.45□□□□□ -0.9
GPCPD1-204ENST00000473797 PDXDC2PQ6P474 469 aa9.44□□□□□ -0.9
GPCPD1-204ENST00000473797 SCARF1Q14162 830 aa9.43□□□□□ -0.9
GPCPD1-204ENST00000473797 ITPKCQ96DU7 683 aa9.43□□□□□ -0.9
GPCPD1-204ENST00000473797 ZC3H4Q9UPT8 1303 aaKnown RBP9.42□□□□□ -0.9
GPCPD1-204ENST00000473797 SLC24A1O60721 1099 aa9.42□□□□□ -0.9
GPCPD1-204ENST00000473797 ZIC2O95409 532 aaPredicted RBP9.42□□□□□ -0.9
GPCPD1-204ENST00000473797 LRRN4Q8WUT4 740 aa9.42□□□□□ -0.9
GPCPD1-204ENST00000473797 SLC16A10Q8TF71 515 aa9.41□□□□□ -0.9
GPCPD1-204ENST00000473797 ZFAND3Q9H8U3 227 aa9.41□□□□□ -0.9
GPCPD1-204ENST00000473797 FKBPLQ9UIM3 349 aa9.41□□□□□ -0.9
GPCPD1-204ENST00000473797 ERFEQ4G0M1 354 aa9.4□□□□□ -0.9
GPCPD1-204ENST00000473797 GOPCQ9HD26 462 aa9.4□□□□□ -0.9
GPCPD1-204ENST00000473797 INSM1Q01101 510 aaPredicted RBP9.39□□□□□ -0.91
GPCPD1-204ENST00000473797 VASH1Q7L8A9 365 aaPredicted RBP9.39□□□□□ -0.91
GPCPD1-204ENST00000473797 PURBQ96QR8 312 aaKnown RBP9.39□□□□□ -0.91
GPCPD1-204ENST00000473797 MAGEB6P1A0A0J9YX57 407 aa9.38□□□□□ -0.91
GPCPD1-204ENST00000473797 H3BM21 787 aa9.38□□□□□ -0.91
GPCPD1-204ENST00000473797 MEIOBQ8N635 442 aa9.38□□□□□ -0.91
GPCPD1-204ENST00000473797 GPSM3Q9Y4H4 160 aa9.38□□□□□ -0.91
GPCPD1-204ENST00000473797 FSHRP23945 695 aa9.37□□□□□ -0.91
GPCPD1-204ENST00000473797 NR6A1Q15406 480 aa9.37□□□□□ -0.91
GPCPD1-204ENST00000473797 CDV3Q9UKY7 258 aaKnown RBP9.37□□□□□ -0.91
GPCPD1-204ENST00000473797 EMILIN1Q9Y6C2 1016 aa9.37□□□□□ -0.91
GPCPD1-204ENST00000473797 CCDC116Q8IYX3 515 aa9.36□□□□□ -0.91
GPCPD1-204ENST00000473797 OCSTAMPQ9BR26 566 aa9.36□□□□□ -0.91
GPCPD1-204ENST00000473797 ARHGAP9Q9BRR9 750 aa9.36□□□□□ -0.91
GPCPD1-204ENST00000473797 STK17AQ9UEE5 414 aa9.36□□□□□ -0.91
GPCPD1-204ENST00000473797 IRF7Q92985 503 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms