RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 SENP2Q9HC62 589 aa7.69□□□□□ -1.18
GARNL3-213ENST00000464616 GMPR2Q9P2T1 348 aaKnown RBP7.69□□□□□ -1.18
GARNL3-213ENST00000464616 DACH1Q9UI36 760 aa7.69□□□□□ -1.18
GARNL3-213ENST00000464616 LYPD8Q6UX82 237 aa7.68□□□□□ -1.18
GARNL3-213ENST00000464616 ZNF511Q8NB15 262 aa7.68□□□□□ -1.18
GARNL3-213ENST00000464616 CABLES1Q8TDN4 633 aa7.68□□□□□ -1.18
GARNL3-213ENST00000464616 CFAP99D6REC4 459 aa7.67□□□□□ -1.18
GARNL3-213ENST00000464616 VARSP26640 1264 aaKnown RBP7.67□□□□□ -1.18
GARNL3-213ENST00000464616 MYSM1Q5VVJ2 828 aa7.67□□□□□ -1.18
GARNL3-213ENST00000464616 ATP13A2Q9NQ11 1180 aa7.67□□□□□ -1.18
GARNL3-213ENST00000464616 ARID5BQ14865 1188 aa7.66□□□□□ -1.18
GARNL3-213ENST00000464616 POLR3EQ9NVU0 708 aa7.66□□□□□ -1.18
GARNL3-213ENST00000464616 CAPN5O15484 640 aaPredicted RBP7.65□□□□□ -1.18
GARNL3-213ENST00000464616 CLK2P49760 499 aaKnown RBP7.65□□□□□ -1.18
GARNL3-213ENST00000464616 ARMC2Q8NEN0 867 aa7.65□□□□□ -1.18
GARNL3-213ENST00000464616 FAM174AQ8TBP5 190 aa7.65□□□□□ -1.18
GARNL3-213ENST00000464616 KIFC2Q96AC6 838 aa7.65□□□□□ -1.18
GARNL3-213ENST00000464616 SLC24A1O60721 1099 aa7.64□□□□□ -1.19
GARNL3-213ENST00000464616 MAP10Q9P2G4 905 aa7.64□□□□□ -1.19
GARNL3-213ENST00000464616 LIMD1Q9UGP4 676 aa7.64□□□□□ -1.19
GARNL3-213ENST00000464616 SIAH2O43255 324 aa7.63□□□□□ -1.19
GARNL3-213ENST00000464616 QPCTQ16769 361 aa7.62□□□□□ -1.19
GARNL3-213ENST00000464616 TUSC1Q2TAM9 212 aa7.62□□□□□ -1.19
GARNL3-213ENST00000464616 BPHLQ86WA6 291 aaPredicted RBP7.62□□□□□ -1.19
GARNL3-213ENST00000464616 TLL2Q9Y6L7 1015 aa7.62□□□□□ -1.19
GARNL3-213ENST00000464616 LILRB3O75022 631 aa7.61□□□□□ -1.19
GARNL3-213ENST00000464616 NBPF14Q5TI25 921 aa7.61□□□□□ -1.19
GARNL3-213ENST00000464616 DDRGK1Q96HY6 314 aa7.61□□□□□ -1.19
GARNL3-213ENST00000464616 NNTQ13423 1086 aa7.6□□□□□ -1.19
GARNL3-213ENST00000464616 TRIM47Q96LD4 638 aa7.6□□□□□ -1.19
GARNL3-213ENST00000464616 PER1O15534 1290 aaPredicted RBP7.59□□□□□ -1.19
GARNL3-213ENST00000464616 WFS1O76024 890 aa7.59□□□□□ -1.19
GARNL3-213ENST00000464616 SCARF1Q14162 830 aa7.59□□□□□ -1.19
GARNL3-213ENST00000464616 TREML4Q6UXN2 200 aa7.59□□□□□ -1.19
GARNL3-213ENST00000464616 FOXJ1Q92949 421 aa7.59□□□□□ -1.19
GARNL3-213ENST00000464616 MAGEB6P1A0A0J9YX57 407 aa7.58□□□□□ -1.2
GARNL3-213ENST00000464616 F12P00748 615 aaPredicted RBP7.58□□□□□ -1.2
GARNL3-213ENST00000464616 SNRPBP14678 240 aaKnown RBP7.58□□□□□ -1.2
GARNL3-213ENST00000464616 WDR4P57081 412 aaKnown RBP7.58□□□□□ -1.2
GARNL3-213ENST00000464616 RTL5Q5HYW3 569 aaPredicted RBP7.58□□□□□ -1.2
GARNL3-213ENST00000464616 KDM4CQ9H3R0 1056 aa7.58□□□□□ -1.2
GARNL3-213ENST00000464616 ADH1CP00326 375 aa7.57□□□□□ -1.2
GARNL3-213ENST00000464616 BMP1P13497 986 aa7.57□□□□□ -1.2
GARNL3-213ENST00000464616 SKIV2LQ15477 1246 aaKnown RBP7.57□□□□□ -1.2
GARNL3-213ENST00000464616 MPNDQ8N594 471 aa7.57□□□□□ -1.2
GARNL3-213ENST00000464616 GPBP1L1Q9HC44 474 aaPredicted RBP7.57□□□□□ -1.2
GARNL3-213ENST00000464616 UPP2O95045 317 aa7.56□□□□□ -1.2
GARNL3-213ENST00000464616 SLC16A10Q8TF71 515 aa7.56□□□□□ -1.2
GARNL3-213ENST00000464616 NR5A1Q13285 461 aa7.55□□□□□ -1.2
GARNL3-213ENST00000464616 PNMA1Q8ND90 353 aa7.55□□□□□ -1.2
GARNL3-213ENST00000464616 CARD14Q9BXL6 1004 aa7.55□□□□□ -1.2
GARNL3-213ENST00000464616 CTDSPL2Q05D32 466 aa7.54□□□□□ -1.2
GARNL3-213ENST00000464616 VASH1Q7L8A9 365 aaPredicted RBP7.54□□□□□ -1.2
GARNL3-213ENST00000464616 AP1G2O75843 785 aa7.53□□□□□ -1.2
GARNL3-213ENST00000464616 ZIC2O95409 532 aaPredicted RBP7.53□□□□□ -1.2
GARNL3-213ENST00000464616 SH3D19Q5HYK7 790 aa7.53□□□□□ -1.2
GARNL3-213ENST00000464616 MRPL14Q6P1L8 145 aaKnown RBP7.53□□□□□ -1.2
GARNL3-213ENST00000464616 GPKOWQ92917 476 aaPredicted RBP eCLIP7.53□□□□□ -1.2
GARNL3-213ENST00000464616 CDK15Q96Q40 435 aa7.53□□□□□ -1.2
GARNL3-213ENST00000464616 FAM117AQ9C073 453 aa7.53□□□□□ -1.2
GARNL3-213ENST00000464616 TERTO14746 1132 aaKnown RBP7.52□□□□□ -1.21
GARNL3-213ENST00000464616 TRIM46Q7Z4K8 759 aa7.52□□□□□ -1.21
GARNL3-213ENST00000464616 ZBTB33Q86T24 672 aa7.52□□□□□ -1.21
GARNL3-213ENST00000464616 ZFP42Q96MM3 310 aa7.52□□□□□ -1.21
GARNL3-213ENST00000464616 TIMP2P16035 220 aa7.51□□□□□ -1.21
GARNL3-213ENST00000464616 FSHRP23945 695 aa7.51□□□□□ -1.21
GARNL3-213ENST00000464616 PURBQ96QR8 312 aaKnown RBP7.51□□□□□ -1.21
GARNL3-213ENST00000464616 ARHGAP9Q9BRR9 750 aa7.51□□□□□ -1.21
GARNL3-213ENST00000464616 INSM1Q01101 510 aaPredicted RBP7.5□□□□□ -1.21
GARNL3-213ENST00000464616 C6orf118Q5T5N4 469 aa7.5□□□□□ -1.21
GARNL3-213ENST00000464616 PROCA1Q8NCQ7 364 aaPredicted RBP7.5□□□□□ -1.21
GARNL3-213ENST00000464616 NXF1Q9UBU9 619 aaKnown RBP7.5□□□□□ -1.21
GARNL3-213ENST00000464616 BMP2P12643 396 aa7.49□□□□□ -1.21
GARNL3-213ENST00000464616 NEUROD2Q15784 382 aa7.49□□□□□ -1.21
GARNL3-213ENST00000464616 C4orf48Q5BLP8 95 aa7.49□□□□□ -1.21
GARNL3-213ENST00000464616 LRRN4Q8WUT4 740 aa7.49□□□□□ -1.21
GARNL3-213ENST00000464616 SLC10A4Q96EP9 437 aa7.49□□□□□ -1.21
GARNL3-213ENST00000464616 PCMTD1Q96MG8 357 aaPredicted RBP7.49□□□□□ -1.21
GARNL3-213ENST00000464616 FKBPLQ9UIM3 349 aa7.49□□□□□ -1.21
GARNL3-213ENST00000464616 MAN1A2O60476 641 aa7.48□□□□□ -1.21
GARNL3-213ENST00000464616 PTK2Q05397 1052 aa7.48□□□□□ -1.21
GARNL3-213ENST00000464616 NFX1Q12986 1120 aaKnown RBP7.48□□□□□ -1.21
GARNL3-213ENST00000464616 PDXDC2PQ6P474 469 aa7.48□□□□□ -1.21
GARNL3-213ENST00000464616 SH3BP5LQ7L8J4 393 aa7.48□□□□□ -1.21
GARNL3-213ENST00000464616 ITPKCQ96DU7 683 aa7.48□□□□□ -1.21
GARNL3-213ENST00000464616 ZFAND3Q9H8U3 227 aa7.48□□□□□ -1.21
GARNL3-213ENST00000464616 MAP4K5Q9Y4K4 846 aa7.48□□□□□ -1.21
GARNL3-213ENST00000464616 EMILIN1Q9Y6C2 1016 aa7.48□□□□□ -1.21
GARNL3-213ENST00000464616 GRM5P41594 1212 aa7.47□□□□□ -1.21
GARNL3-213ENST00000464616 NR6A1Q15406 480 aa7.47□□□□□ -1.21
GARNL3-213ENST00000464616 SH3RF1Q7Z6J0 888 aa7.47□□□□□ -1.21
GARNL3-213ENST00000464616 CCDC116Q8IYX3 515 aa7.47□□□□□ -1.21
GARNL3-213ENST00000464616 PGPEP1Q9NXJ5 209 aa7.47□□□□□ -1.21
GARNL3-213ENST00000464616 CDV3Q9UKY7 258 aaKnown RBP7.47□□□□□ -1.21
GARNL3-213ENST00000464616 NR3C2P08235 984 aa7.46□□□□□ -1.22
GARNL3-213ENST00000464616 TRMT44Q8IYL2 757 aaKnown RBP7.46□□□□□ -1.22
GARNL3-213ENST00000464616 IRF7Q92985 503 aa7.46□□□□□ -1.22
GARNL3-213ENST00000464616 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.46□□□□□ -1.22
GARNL3-213ENST00000464616 ZC3H4Q9UPT8 1303 aaKnown RBP7.46□□□□□ -1.22
GARNL3-213ENST00000464616 DHX9Q08211 1270 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms