RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 TNS1Q9HBL0 1735 aaKnown RBP22.95■■□□□ 1.26
CHCHD3-204ENST00000457942 HIRIP3Q9BW71 556 aaPredicted RBP22.93■■□□□ 1.26
CHCHD3-204ENST00000457942 ALS2Q96Q42 1657 aa22.93■■□□□ 1.26
CHCHD3-204ENST00000457942 ADGRB2O60241 1585 aa22.93■■□□□ 1.26
CHCHD3-204ENST00000457942 STAC3Q96MF2 364 aa22.92■■□□□ 1.26
CHCHD3-204ENST00000457942 THSD7AQ9UPZ6 1657 aa22.91■■□□□ 1.26
CHCHD3-204ENST00000457942 ANKARQ7Z5J8 1434 aa22.91■■□□□ 1.26
CHCHD3-204ENST00000457942 MINK1Q8N4C8 1332 aaPredicted RBP22.9■■□□□ 1.26
CHCHD3-204ENST00000457942 CRYBG1Q9Y4K1 1723 aa22.9■■□□□ 1.26
CHCHD3-204ENST00000457942 ARHGEF28Q8N1W1 1705 aaKnown RBP22.88■■□□□ 1.25
CHCHD3-204ENST00000457942 EIF3AQ14152 1382 aaKnown RBP22.88■■□□□ 1.25
CHCHD3-204ENST00000457942 SPATA31A5Q5VU36 1347 aa22.86■■□□□ 1.25
CHCHD3-204ENST00000457942 SPATA31A7Q8IWB4 1347 aa22.86■■□□□ 1.25
CHCHD3-204ENST00000457942 EZH2Q15910 746 aaKnown RBP22.86■■□□□ 1.25
CHCHD3-204ENST00000457942 GPRASP1Q5JY77 1395 aa22.86■■□□□ 1.25
CHCHD3-204ENST00000457942 PRR36Q9H6K5 1346 aa22.85■■□□□ 1.25
CHCHD3-204ENST00000457942 PAK3O75914 559 aaPredicted RBP22.85■■□□□ 1.25
CHCHD3-204ENST00000457942 TULP4Q9NRJ4 1543 aa22.84■■□□□ 1.25
CHCHD3-204ENST00000457942 PRDM11Q9NQV5 511 aa22.84■■□□□ 1.25
CHCHD3-204ENST00000457942 PHRF1Q9P1Y6 1649 aaKnown RBP22.82■■□□□ 1.24
CHCHD3-204ENST00000457942 DISP2A7MBM2 1401 aa22.82■■□□□ 1.24
CHCHD3-204ENST00000457942 WASLO00401 505 aaPredicted RBP22.81■■□□□ 1.24
CHCHD3-204ENST00000457942 TRIM37O94972 964 aa22.81■■□□□ 1.24
CHCHD3-204ENST00000457942 CHRNA2Q15822 529 aa22.81■■□□□ 1.24
CHCHD3-204ENST00000457942 STRN4Q9NRL3 753 aa22.81■■□□□ 1.24
CHCHD3-204ENST00000457942 KIAA1210Q9ULL0 1709 aa22.81■■□□□ 1.24
CHCHD3-204ENST00000457942 ITSN1Q15811 1721 aa22.8■■□□□ 1.24
CHCHD3-204ENST00000457942 KIAA0232Q92628 1395 aa22.79■■□□□ 1.24
CHCHD3-204ENST00000457942 NGDNQ8NEJ9 315 aaKnown RBP22.79■■□□□ 1.24
CHCHD3-204ENST00000457942 USP35Q9P2H5 1018 aa22.78■■□□□ 1.24
CHCHD3-204ENST00000457942 NUTM2GQ5VZR2 741 aa22.76■■□□□ 1.23
CHCHD3-204ENST00000457942 RREB1Q92766 1687 aa22.76■■□□□ 1.23
CHCHD3-204ENST00000457942 NUP188Q5SRE5 1749 aa22.76■■□□□ 1.23
CHCHD3-204ENST00000457942 SPATA31A1Q5TZJ5 1347 aa22.76■■□□□ 1.23
CHCHD3-204ENST00000457942 APBA3O96018 575 aa22.75■■□□□ 1.23
CHCHD3-204ENST00000457942 CAMKK2Q96RR4 588 aa22.74■■□□□ 1.23
CHCHD3-204ENST00000457942 ZC3H6P61129 1189 aaKnown RBP22.73■■□□□ 1.23
CHCHD3-204ENST00000457942 ATP7BP35670 1465 aa22.73■■□□□ 1.23
CHCHD3-204ENST00000457942 FAM196AQ6ZSG2 479 aa22.71■■□□□ 1.23
CHCHD3-204ENST00000457942 NUDT16Q96DE0 195 aaKnown RBP22.71■■□□□ 1.23
CHCHD3-204ENST00000457942 NBPF1Q3BBV0 1214 aa22.7■■□□□ 1.22
CHCHD3-204ENST00000457942 NRKQ7Z2Y5 1582 aa22.7■■□□□ 1.22
CHCHD3-204ENST00000457942 YY1P25490 414 aa22.69■■□□□ 1.22
CHCHD3-204ENST00000457942 CDK19Q9BWU1 502 aa22.69■■□□□ 1.22
CHCHD3-204ENST00000457942 SSH2Q76I76 1423 aa22.68■■□□□ 1.22
CHCHD3-204ENST00000457942 TOPAZ1Q8N9V7 1692 aa22.67■■□□□ 1.22
CHCHD3-204ENST00000457942 PARD3Q8TEW0 1356 aa22.66■■□□□ 1.22
CHCHD3-204ENST00000457942 PDE3BQ13370 1112 aa22.66■■□□□ 1.22
CHCHD3-204ENST00000457942 QRICH2Q9H0J4 1663 aa22.65■■□□□ 1.22
CHCHD3-204ENST00000457942 EVA1CP58658 441 aa22.65■■□□□ 1.22
CHCHD3-204ENST00000457942 NEUROD1Q13562 356 aa22.65■■□□□ 1.22
CHCHD3-204ENST00000457942 PPP1R1BQ9UD71 204 aaPredicted RBP22.65■■□□□ 1.22
CHCHD3-204ENST00000457942 CENPJQ9HC77 1338 aaPredicted RBP22.64■■□□□ 1.22
CHCHD3-204ENST00000457942 LARP1Q6PKG0 1096 aaKnown RBP22.64■■□□□ 1.21
CHCHD3-204ENST00000457942 L3MBTL2Q969R5 705 aa22.64■■□□□ 1.21
CHCHD3-204ENST00000457942 SIN3AQ96ST3 1273 aa22.64■■□□□ 1.21
CHCHD3-204ENST00000457942 CAMTA1Q9Y6Y1 1673 aa22.63■■□□□ 1.21
CHCHD3-204ENST00000457942 SRPK2P78362 688 aaKnown RBP22.63■■□□□ 1.21
CHCHD3-204ENST00000457942 LMO7Q8WWI1 1683 aa22.62■■□□□ 1.21
CHCHD3-204ENST00000457942 NBPF8Q3BBV2 869 aa22.61■■□□□ 1.21
CHCHD3-204ENST00000457942 NBPF14Q5TI25 921 aa22.61■■□□□ 1.21
CHCHD3-204ENST00000457942 CCDC61Q9Y6R9 512 aa22.61■■□□□ 1.21
CHCHD3-204ENST00000457942 TRPM1Q7Z4N2 1603 aa22.6■■□□□ 1.21
CHCHD3-204ENST00000457942 ACEP12821 1306 aa22.6■■□□□ 1.21
CHCHD3-204ENST00000457942 ZBTB7CA1YPR0 619 aa22.6■■□□□ 1.21
CHCHD3-204ENST00000457942 BARGINQ6ZT62 677 aa22.58■■□□□ 1.21
CHCHD3-204ENST00000457942 TCP11L2Q8N4U5 519 aa22.58■■□□□ 1.21
CHCHD3-204ENST00000457942 POLR3AO14802 1390 aaPredicted RBP22.58■■□□□ 1.21
CHCHD3-204ENST00000457942 PPIP5K1Q6PFW1 1433 aa22.57■■□□□ 1.2
CHCHD3-204ENST00000457942 PARP4Q9UKK3 1724 aaKnown RBP22.57■■□□□ 1.2
CHCHD3-204ENST00000457942 ROCK2O75116 1388 aaKnown RBP22.56■■□□□ 1.2
CHCHD3-204ENST00000457942 SPON1Q9HCB6 807 aa22.56■■□□□ 1.2
CHCHD3-204ENST00000457942 CABP2Q9NPB3 220 aa22.56■■□□□ 1.2
CHCHD3-204ENST00000457942 ABTB2Q8N961 1025 aa22.55■■□□□ 1.2
CHCHD3-204ENST00000457942 LRRC37A3O60309 1634 aa22.55■■□□□ 1.2
CHCHD3-204ENST00000457942 PLEKHG3A1L390 1219 aa22.54■■□□□ 1.2
CHCHD3-204ENST00000457942 COL5A2P05997 1499 aaPredicted RBP22.54■■□□□ 1.2
CHCHD3-204ENST00000457942 KCNQ2O43526 872 aa22.53■■□□□ 1.2
CHCHD3-204ENST00000457942 USP19O94966 1318 aa22.52■■□□□ 1.2
CHCHD3-204ENST00000457942 CPDO75976 1380 aa22.51■■□□□ 1.19
CHCHD3-204ENST00000457942 NINLQ9Y2I6 1382 aa22.51■■□□□ 1.19
CHCHD3-204ENST00000457942 PEAK1Q9H792 1746 aa22.51■■□□□ 1.19
CHCHD3-204ENST00000457942 OVOS2A0A0G2JMS6 1433 aa22.51■■□□□ 1.19
CHCHD3-204ENST00000457942 OVOS2A0A0J9YW53 1432 aa22.51■■□□□ 1.19
CHCHD3-204ENST00000457942 OVOS2Q6IE36 1432 aa22.51■■□□□ 1.19
CHCHD3-204ENST00000457942 ANO8Q9HCE9 1232 aaPredicted RBP22.51■■□□□ 1.19
CHCHD3-204ENST00000457942 DCAF8L1A6NGE4 600 aa22.5■■□□□ 1.19
CHCHD3-204ENST00000457942 CASZ1Q86V15 1759 aa22.49■■□□□ 1.19
CHCHD3-204ENST00000457942 EVC2Q86UK5 1308 aa22.49■■□□□ 1.19
CHCHD3-204ENST00000457942 MYOM1P52179 1685 aa22.49■■□□□ 1.19
CHCHD3-204ENST00000457942 RGPD3A6NKT7 1758 aaPredicted RBP22.48■■□□□ 1.19
CHCHD3-204ENST00000457942 RGPD4Q7Z3J3 1758 aa22.48■■□□□ 1.19
CHCHD3-204ENST00000457942 CRB1P82279 1406 aa22.48■■□□□ 1.19
CHCHD3-204ENST00000457942 PTF1AQ7RTS3 328 aa22.47■■□□□ 1.19
CHCHD3-204ENST00000457942 PDGFDQ9GZP0 370 aaPredicted RBP22.47■■□□□ 1.19
CHCHD3-204ENST00000457942 CABP1Q9NZU7 370 aa22.47■■□□□ 1.19
CHCHD3-204ENST00000457942 SBF2Q86WG5 1849 aa22.46■■□□□ 1.19
CHCHD3-204ENST00000457942 WNK3Q9BYP7 1800 aa22.46■■□□□ 1.19
CHCHD3-204ENST00000457942 GCP02774 474 aa22.46■■□□□ 1.19
CHCHD3-204ENST00000457942 THRAP3Q9Y2W1 955 aaKnown RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms