RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 NUTM2BA6NNL0 878 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P18-201ENST00000438801 NUTM2EB1AL46 878 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P18-201ENST00000438801 F12P00748 615 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P18-201ENST00000438801 VARSP26640 1264 aaKnown RBP7.43□□□□□ -1.22
HMGB1P18-201ENST00000438801 QPCTQ16769 361 aa7.43□□□□□ -1.22
HMGB1P18-201ENST00000438801 NUTM2DQ5VT03 806 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P18-201ENST00000438801 NUTM2AQ8IVF1 878 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P18-201ENST00000438801 MAP10Q9P2G4 905 aa7.43□□□□□ -1.22
HMGB1P18-201ENST00000438801 LILRB3O75022 631 aa7.42□□□□□ -1.22
HMGB1P18-201ENST00000438801 TSC1Q92574 1164 aa7.42□□□□□ -1.22
HMGB1P18-201ENST00000438801 SENP2Q9HC62 589 aa7.42□□□□□ -1.22
HMGB1P18-201ENST00000438801 TLL2Q9Y6L7 1015 aa7.42□□□□□ -1.22
HMGB1P18-201ENST00000438801 PER1O15534 1290 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P18-201ENST00000438801 CLK2P49760 499 aaKnown RBP7.41□□□□□ -1.22
HMGB1P18-201ENST00000438801 TRIM47Q96LD4 638 aa7.41□□□□□ -1.22
HMGB1P18-201ENST00000438801 RSPH6AQ9H0K4 717 aa7.41□□□□□ -1.22
HMGB1P18-201ENST00000438801 PLEKHG3A1L390 1219 aa7.4□□□□□ -1.22
HMGB1P18-201ENST00000438801 SNRPBP14678 240 aaKnown RBP7.4□□□□□ -1.22
HMGB1P18-201ENST00000438801 TREML4Q6UXN2 200 aa7.4□□□□□ -1.22
HMGB1P18-201ENST00000438801 MPNDQ8N594 471 aa7.4□□□□□ -1.22
HMGB1P18-201ENST00000438801 KIFC2Q96AC6 838 aa7.4□□□□□ -1.22
HMGB1P18-201ENST00000438801 CAPN5O15484 640 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P18-201ENST00000438801 RTL5Q5HYW3 569 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P18-201ENST00000438801 LCE2AQ5TA79 106 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P18-201ENST00000438801 BCANQ96GW7 911 aa7.39□□□□□ -1.23
HMGB1P18-201ENST00000438801 POLR3EQ9NVU0 708 aa7.39□□□□□ -1.23
HMGB1P18-201ENST00000438801 NNTQ13423 1086 aa7.38□□□□□ -1.23
HMGB1P18-201ENST00000438801 HELBQ8NG08 1087 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P18-201ENST00000438801 FAM174AQ8TBP5 190 aa7.38□□□□□ -1.23
HMGB1P18-201ENST00000438801 FOXJ1Q92949 421 aa7.38□□□□□ -1.23
HMGB1P18-201ENST00000438801 AGERQ15109 404 aa7.37□□□□□ -1.23
HMGB1P18-201ENST00000438801 WFS1O76024 890 aa7.36□□□□□ -1.23
HMGB1P18-201ENST00000438801 BMP1P13497 986 aa7.36□□□□□ -1.23
HMGB1P18-201ENST00000438801 TRIM46Q7Z4K8 759 aa7.36□□□□□ -1.23
HMGB1P18-201ENST00000438801 BPHLQ86WA6 291 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P18-201ENST00000438801 GPBP1L1Q9HC44 474 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P18-201ENST00000438801 ADH1CP00326 375 aa7.35□□□□□ -1.23
HMGB1P18-201ENST00000438801 NFX1Q12986 1120 aaKnown RBP7.35□□□□□ -1.23
HMGB1P18-201ENST00000438801 C4orf48Q5BLP8 95 aa7.35□□□□□ -1.23
HMGB1P18-201ENST00000438801 ARMC2Q8NEN0 867 aa7.35□□□□□ -1.23
HMGB1P18-201ENST00000438801 KDM4CQ9H3R0 1056 aa7.35□□□□□ -1.23
HMGB1P18-201ENST00000438801 ARID5BQ14865 1188 aa7.34□□□□□ -1.23
HMGB1P18-201ENST00000438801 CDK15Q96Q40 435 aa7.34□□□□□ -1.23
HMGB1P18-201ENST00000438801 WDR4P57081 412 aaKnown RBP7.33□□□□□ -1.24
HMGB1P18-201ENST00000438801 SKIV2LQ15477 1246 aaKnown RBP7.33□□□□□ -1.24
HMGB1P18-201ENST00000438801 NBPF14Q5TI25 921 aa7.33□□□□□ -1.24
HMGB1P18-201ENST00000438801 TERTO14746 1132 aaKnown RBP7.32□□□□□ -1.24
HMGB1P18-201ENST00000438801 TIMP2P16035 220 aa7.32□□□□□ -1.24
HMGB1P18-201ENST00000438801 CTDSPL2Q05D32 466 aa7.32□□□□□ -1.24
HMGB1P18-201ENST00000438801 SH3D19Q5HYK7 790 aa7.32□□□□□ -1.24
HMGB1P18-201ENST00000438801 SH3RF1Q7Z6J0 888 aa7.32□□□□□ -1.24
HMGB1P18-201ENST00000438801 DDRGK1Q96HY6 314 aa7.32□□□□□ -1.24
HMGB1P18-201ENST00000438801 KLF16Q9BXK1 252 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P18-201ENST00000438801 FAM117AQ9C073 453 aa7.32□□□□□ -1.24
HMGB1P18-201ENST00000438801 SLC24A1O60721 1099 aa7.31□□□□□ -1.24
HMGB1P18-201ENST00000438801 ZFP42Q96MM3 310 aa7.31□□□□□ -1.24
HMGB1P18-201ENST00000438801 NR3C2P08235 984 aa7.3□□□□□ -1.24
HMGB1P18-201ENST00000438801 GRM5P41594 1212 aa7.3□□□□□ -1.24
HMGB1P18-201ENST00000438801 NR5A1Q13285 461 aa7.3□□□□□ -1.24
HMGB1P18-201ENST00000438801 MRPL14Q6P1L8 145 aaKnown RBP7.3□□□□□ -1.24
HMGB1P18-201ENST00000438801 SH3BP5LQ7L8J4 393 aa7.3□□□□□ -1.24
HMGB1P18-201ENST00000438801 PROCA1Q8NCQ7 364 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P18-201ENST00000438801 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.3□□□□□ -1.24
HMGB1P18-201ENST00000438801 ATP1B4Q9UN42 357 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P18-201ENST00000438801 FBXO31Q5XUX0 539 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P18-201ENST00000438801 GPKOWQ92917 476 aaPredicted RBP eCLIP7.29□□□□□ -1.24
HMGB1P18-201ENST00000438801 C1QTNF2Q9BXJ5 285 aa7.29□□□□□ -1.24
HMGB1P18-201ENST00000438801 MAGEB6P1A0A0J9YX57 407 aa7.28□□□□□ -1.24
HMGB1P18-201ENST00000438801 ZIC2O95409 532 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P18-201ENST00000438801 SCARF1Q14162 830 aa7.28□□□□□ -1.24
HMGB1P18-201ENST00000438801 PPP2R2DQ66LE6 453 aa7.28□□□□□ -1.24
HMGB1P18-201ENST00000438801 LRRN4Q8WUT4 740 aa7.28□□□□□ -1.24
HMGB1P18-201ENST00000438801 ITPKCQ96DU7 683 aa7.28□□□□□ -1.24
HMGB1P18-201ENST00000438801 WIPF1O43516 503 aa7.27□□□□□ -1.25
HMGB1P18-201ENST00000438801 LCE2CQ5TA81 110 aa7.27□□□□□ -1.25
HMGB1P18-201ENST00000438801 VASH1Q7L8A9 365 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P18-201ENST00000438801 TRMT44Q8IYL2 757 aaKnown RBP7.27□□□□□ -1.25
HMGB1P18-201ENST00000438801 PURBQ96QR8 312 aaKnown RBP7.27□□□□□ -1.25
HMGB1P18-201ENST00000438801 ZFAND3Q9H8U3 227 aa7.27□□□□□ -1.25
HMGB1P18-201ENST00000438801 NXF1Q9UBU9 619 aaKnown RBP7.27□□□□□ -1.25
HMGB1P18-201ENST00000438801 MAP4K5Q9Y4K4 846 aa7.27□□□□□ -1.25
HMGB1P18-201ENST00000438801 FSHRP23945 695 aa7.26□□□□□ -1.25
HMGB1P18-201ENST00000438801 SLC16A10Q8TF71 515 aa7.26□□□□□ -1.25
HMGB1P18-201ENST00000438801 CARD14Q9BXL6 1004 aa7.26□□□□□ -1.25
HMGB1P18-201ENST00000438801 NR6A1Q15406 480 aa7.25□□□□□ -1.25
HMGB1P18-201ENST00000438801 PDXDC2PQ6P474 469 aa7.25□□□□□ -1.25
HMGB1P18-201ENST00000438801 FKBPLQ9UIM3 349 aa7.25□□□□□ -1.25
HMGB1P18-201ENST00000438801 AP1G2O75843 785 aa7.24□□□□□ -1.25
HMGB1P18-201ENST00000438801 ERFEQ4G0M1 354 aa7.24□□□□□ -1.25
HMGB1P18-201ENST00000438801 NPAS3Q8IXF0 933 aa7.24□□□□□ -1.25
HMGB1P18-201ENST00000438801 ARHGAP9Q9BRR9 750 aa7.24□□□□□ -1.25
HMGB1P18-201ENST00000438801 INSM1Q01101 510 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P18-201ENST00000438801 CCDC116Q8IYX3 515 aa7.23□□□□□ -1.25
HMGB1P18-201ENST00000438801 VEGFBP49765 207 aa7.22□□□□□ -1.25
HMGB1P18-201ENST00000438801 C6orf118Q5T5N4 469 aa7.22□□□□□ -1.25
HMGB1P18-201ENST00000438801 LINC00528Q8N1L1 170 aa7.22□□□□□ -1.25
HMGB1P18-201ENST00000438801 MEIOBQ8N635 442 aa7.22□□□□□ -1.25
HMGB1P18-201ENST00000438801 EMILIN1Q9Y6C2 1016 aa7.22□□□□□ -1.25
HMGB1P18-201ENST00000438801 ZC3H4Q9UPT8 1303 aaKnown RBP7.22□□□□□ -1.25
HMGB1P18-201ENST00000438801 SOBPA7XYQ1 873 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms