RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 SH3BP2P78314 561 aa7.72□□□□□ -1.17
HMGB3P12-201ENST00000438745 CTDSPL2Q05D32 466 aa7.72□□□□□ -1.17
HMGB3P12-201ENST00000438745 PKDCCQ504Y2 493 aa7.72□□□□□ -1.17
HMGB3P12-201ENST00000438745 RC3H1Q5TC82 1133 aaKnown RBP7.72□□□□□ -1.17
HMGB3P12-201ENST00000438745 ZNF775Q96BV0 537 aaPredicted RBP7.72□□□□□ -1.17
HMGB3P12-201ENST00000438745 FAM187AA6NFU0 413 aa7.71□□□□□ -1.18
HMGB3P12-201ENST00000438745 SIAH2O43255 324 aa7.71□□□□□ -1.18
HMGB3P12-201ENST00000438745 HELBQ8NG08 1087 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P12-201ENST00000438745 BAP1Q92560 729 aa7.71□□□□□ -1.18
HMGB3P12-201ENST00000438745 MRGPRX2Q96LB1 330 aa7.71□□□□□ -1.18
HMGB3P12-201ENST00000438745 ST8SIA5O15466 376 aa7.7□□□□□ -1.18
HMGB3P12-201ENST00000438745 MAP10Q9P2G4 905 aa7.7□□□□□ -1.18
HMGB3P12-201ENST00000438745 CTHP32929 405 aa7.69□□□□□ -1.18
HMGB3P12-201ENST00000438745 CYP4X1Q8N118 509 aa7.69□□□□□ -1.18
HMGB3P12-201ENST00000438745 ZNF511Q8NB15 262 aa7.69□□□□□ -1.18
HMGB3P12-201ENST00000438745 SNIP1Q8TAD8 396 aaKnown RBP7.69□□□□□ -1.18
HMGB3P12-201ENST00000438745 PCMTD1Q96MG8 357 aaPredicted RBP7.69□□□□□ -1.18
HMGB3P12-201ENST00000438745 AVPP01185 164 aa7.68□□□□□ -1.18
HMGB3P12-201ENST00000438745 RFC5P40937 340 aa7.68□□□□□ -1.18
HMGB3P12-201ENST00000438745 TSC1Q92574 1164 aa7.68□□□□□ -1.18
HMGB3P12-201ENST00000438745 MPNDQ8N594 471 aa7.67□□□□□ -1.18
HMGB3P12-201ENST00000438745 DACH1Q9UI36 760 aa7.67□□□□□ -1.18
HMGB3P12-201ENST00000438745 SMPD1P17405 629 aa7.66□□□□□ -1.18
HMGB3P12-201ENST00000438745 ARMC2Q8NEN0 867 aa7.66□□□□□ -1.18
HMGB3P12-201ENST00000438745 LRRN4Q8WUT4 740 aa7.66□□□□□ -1.18
HMGB3P12-201ENST00000438745 VARSP26640 1264 aaKnown RBP7.65□□□□□ -1.18
HMGB3P12-201ENST00000438745 LINC01559Q495D7 138 aa7.65□□□□□ -1.18
HMGB3P12-201ENST00000438745 TMEM259Q4ZIN3 620 aa7.65□□□□□ -1.18
HMGB3P12-201ENST00000438745 TTC24A2A3L6 582 aaPredicted RBP7.64□□□□□ -1.19
HMGB3P12-201ENST00000438745 J3QL48 77 aa7.64□□□□□ -1.19
HMGB3P12-201ENST00000438745 AP1G2O75843 785 aa7.64□□□□□ -1.19
HMGB3P12-201ENST00000438745 SMCPP49901 116 aaPredicted RBP7.64□□□□□ -1.19
HMGB3P12-201ENST00000438745 SH3RF1Q7Z6J0 888 aa7.64□□□□□ -1.19
HMGB3P12-201ENST00000438745 CRIPAKQ8N1N5 446 aa7.64□□□□□ -1.19
HMGB3P12-201ENST00000438745 EHBP1Q8NDI1 1231 aa7.64□□□□□ -1.19
HMGB3P12-201ENST00000438745 AAASQ9NRG9 546 aa7.64□□□□□ -1.19
HMGB3P12-201ENST00000438745 ATP1B4Q9UN42 357 aaPredicted RBP7.64□□□□□ -1.19
HMGB3P12-201ENST00000438745 C4orf48Q5BLP8 95 aa7.63□□□□□ -1.19
HMGB3P12-201ENST00000438745 GPKOWQ92917 476 aaPredicted RBP eCLIP7.63□□□□□ -1.19
HMGB3P12-201ENST00000438745 FOXJ1Q92949 421 aa7.63□□□□□ -1.19
HMGB3P12-201ENST00000438745 SH3BP5LQ7L8J4 393 aa7.62□□□□□ -1.19
HMGB3P12-201ENST00000438745 USP17L8P0C7I0 530 aa7.61□□□□□ -1.19
HMGB3P12-201ENST00000438745 NR6A1Q15406 480 aa7.61□□□□□ -1.19
HMGB3P12-201ENST00000438745 PDXDC2PQ6P474 469 aa7.61□□□□□ -1.19
HMGB3P12-201ENST00000438745 BPHLQ86WA6 291 aaPredicted RBP7.61□□□□□ -1.19
HMGB3P12-201ENST00000438745 CDK15Q96Q40 435 aa7.61□□□□□ -1.19
HMGB3P12-201ENST00000438745 FKBPLQ9UIM3 349 aa7.61□□□□□ -1.19
HMGB3P12-201ENST00000438745 CTC1Q2NKJ3 1217 aa7.6□□□□□ -1.19
HMGB3P12-201ENST00000438745 NBPF14Q5TI25 921 aa7.6□□□□□ -1.19
HMGB3P12-201ENST00000438745 BANK1Q8NDB2 785 aa7.6□□□□□ -1.19
HMGB3P12-201ENST00000438745 EPS8L1Q8TE68 723 aa7.6□□□□□ -1.19
HMGB3P12-201ENST00000438745 C1QTNF2Q9BXJ5 285 aa7.6□□□□□ -1.19
HMGB3P12-201ENST00000438745 HMX1Q9NP08 348 aaPredicted RBP7.6□□□□□ -1.19
HMGB3P12-201ENST00000438745 ZC3H4Q9UPT8 1303 aaKnown RBP7.59□□□□□ -1.19
HMGB3P12-201ENST00000438745 SOCS7O14512 581 aa7.59□□□□□ -1.19
HMGB3P12-201ENST00000438745 ALDH1A1P00352 501 aa7.59□□□□□ -1.19
HMGB3P12-201ENST00000438745 FAM174AQ8TBP5 190 aa7.59□□□□□ -1.19
HMGB3P12-201ENST00000438745 HPS1Q92902 700 aa7.59□□□□□ -1.19
HMGB3P12-201ENST00000438745 TRIM34Q9BYJ4 488 aa7.59□□□□□ -1.19
HMGB3P12-201ENST00000438745 GRM5P41594 1212 aa7.57□□□□□ -1.2
HMGB3P12-201ENST00000438745 TRMT44Q8IYL2 757 aaKnown RBP7.57□□□□□ -1.2
HMGB3P12-201ENST00000438745 GJD4Q96KN9 370 aaPredicted RBP7.57□□□□□ -1.2
HMGB3P12-201ENST00000438745 OCSTAMPQ9BR26 566 aa7.57□□□□□ -1.2
HMGB3P12-201ENST00000438745 GPSM3Q9Y4H4 160 aa7.57□□□□□ -1.2
HMGB3P12-201ENST00000438745 AXIN1O15169 862 aa7.56□□□□□ -1.2
HMGB3P12-201ENST00000438745 GMPR2Q9P2T1 348 aaKnown RBP7.56□□□□□ -1.2
HMGB3P12-201ENST00000438745 TLL2Q9Y6L7 1015 aa7.56□□□□□ -1.2
HMGB3P12-201ENST00000438745 AGERQ15109 404 aa7.55□□□□□ -1.2
HMGB3P12-201ENST00000438745 KLF16Q9BXK1 252 aaPredicted RBP7.55□□□□□ -1.2
HMGB3P12-201ENST00000438745 MAP4K5Q9Y4K4 846 aa7.55□□□□□ -1.2
HMGB3P12-201ENST00000438745 WASF2Q9Y6W5 498 aa7.54□□□□□ -1.2
HMGB3P12-201ENST00000438745 ADH1CP00326 375 aa7.53□□□□□ -1.2
HMGB3P12-201ENST00000438745 NR5A1Q13285 461 aa7.53□□□□□ -1.2
HMGB3P12-201ENST00000438745 ERFEQ4G0M1 354 aa7.53□□□□□ -1.2
HMGB3P12-201ENST00000438745 PTK2Q05397 1052 aa7.52□□□□□ -1.21
HMGB3P12-201ENST00000438745 LCE2AQ5TA79 106 aaPredicted RBP7.52□□□□□ -1.21
HMGB3P12-201ENST00000438745 MTMR14Q8NCE2 650 aa7.52□□□□□ -1.21
HMGB3P12-201ENST00000438745 ARHGAP9Q9BRR9 750 aa7.52□□□□□ -1.21
HMGB3P12-201ENST00000438745 SNRKQ9NRH2 765 aa7.52□□□□□ -1.21
HMGB3P12-201ENST00000438745 NNTQ13423 1086 aa7.51□□□□□ -1.21
HMGB3P12-201ENST00000438745 PNMA1Q8ND90 353 aa7.51□□□□□ -1.21
HMGB3P12-201ENST00000438745 MAGEB6P1A0A0J9YX57 407 aa7.5□□□□□ -1.21
HMGB3P12-201ENST00000438745 GPR37L1O60883 481 aa7.5□□□□□ -1.21
HMGB3P12-201ENST00000438745 C11orf95C9JLR9 678 aaPredicted RBP7.49□□□□□ -1.21
HMGB3P12-201ENST00000438745 NR3C2P08235 984 aa7.49□□□□□ -1.21
HMGB3P12-201ENST00000438745 ARID5BQ14865 1188 aa7.49□□□□□ -1.21
HMGB3P12-201ENST00000438745 TREML4Q6UXN2 200 aa7.49□□□□□ -1.21
HMGB3P12-201ENST00000438745 ZBTB33Q86T24 672 aa7.49□□□□□ -1.21
HMGB3P12-201ENST00000438745 ADAM32Q8TC27 787 aa7.49□□□□□ -1.21
HMGB3P12-201ENST00000438745 ATP13A2Q9NQ11 1180 aa7.49□□□□□ -1.21
HMGB3P12-201ENST00000438745 CDV3Q9UKY7 258 aaKnown RBP7.49□□□□□ -1.21
HMGB3P12-201ENST00000438745 CAPN5O15484 640 aaPredicted RBP7.48□□□□□ -1.21
HMGB3P12-201ENST00000438745 TIMP2P16035 220 aa7.48□□□□□ -1.21
HMGB3P12-201ENST00000438745 CARD14Q9BXL6 1004 aa7.48□□□□□ -1.21
HMGB3P12-201ENST00000438745 VASH1Q7L8A9 365 aaPredicted RBP7.47□□□□□ -1.21
HMGB3P12-201ENST00000438745 SNRPBP14678 240 aaKnown RBP7.46□□□□□ -1.22
HMGB3P12-201ENST00000438745 WDR4P57081 412 aaKnown RBP7.46□□□□□ -1.22
HMGB3P12-201ENST00000438745 TRIM46Q7Z4K8 759 aa7.46□□□□□ -1.22
HMGB3P12-201ENST00000438745 ZBBXA8MT70 800 aa7.45□□□□□ -1.22
HMGB3P12-201ENST00000438745 LCE2CQ5TA81 110 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms