RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 ALDH1A1P00352 501 aa9.87□□□□□ -0.83
PTPRK-209ENST00000415046 CTHP32929 405 aa9.87□□□□□ -0.83
PTPRK-209ENST00000415046 HPS1Q92902 700 aa9.87□□□□□ -0.83
PTPRK-209ENST00000415046 MAP10Q9P2G4 905 aa9.87□□□□□ -0.83
PTPRK-209ENST00000415046 NUTM2BA6NNL0 878 aaPredicted RBP9.86□□□□□ -0.83
PTPRK-209ENST00000415046 NUTM2EB1AL46 878 aaPredicted RBP9.86□□□□□ -0.83
PTPRK-209ENST00000415046 PER1O15534 1290 aaPredicted RBP9.86□□□□□ -0.83
PTPRK-209ENST00000415046 NUTM2DQ5VT03 806 aaPredicted RBP9.86□□□□□ -0.83
PTPRK-209ENST00000415046 NUTM2AQ8IVF1 878 aaPredicted RBP9.86□□□□□ -0.83
PTPRK-209ENST00000415046 ZNF775Q96BV0 537 aaPredicted RBP9.85□□□□□ -0.83
PTPRK-209ENST00000415046 KDM4CQ9H3R0 1056 aa9.85□□□□□ -0.83
PTPRK-209ENST00000415046 GPBP1L1Q9HC44 474 aaPredicted RBP9.85□□□□□ -0.83
PTPRK-209ENST00000415046 GMPR2Q9P2T1 348 aaKnown RBP9.84□□□□□ -0.83
PTPRK-209ENST00000415046 VARSP26640 1264 aaKnown RBP9.83□□□□□ -0.84
PTPRK-209ENST00000415046 RTL5Q5HYW3 569 aaPredicted RBP9.83□□□□□ -0.84
PTPRK-209ENST00000415046 HELBQ8NG08 1087 aaPredicted RBP9.83□□□□□ -0.84
PTPRK-209ENST00000415046 TSC1Q92574 1164 aa9.83□□□□□ -0.84
PTPRK-209ENST00000415046 POLR3EQ9NVU0 708 aa9.83□□□□□ -0.84
PTPRK-209ENST00000415046 MPNDQ8N594 471 aa9.82□□□□□ -0.84
PTPRK-209ENST00000415046 DDRGK1Q96HY6 314 aa9.82□□□□□ -0.84
PTPRK-209ENST00000415046 ATP13A2Q9NQ11 1180 aa9.82□□□□□ -0.84
PTPRK-209ENST00000415046 TLL2Q9Y6L7 1015 aa9.82□□□□□ -0.84
PTPRK-209ENST00000415046 SH3D19Q5HYK7 790 aa9.81□□□□□ -0.84
PTPRK-209ENST00000415046 WASF2Q9Y6W5 498 aa9.81□□□□□ -0.84
PTPRK-209ENST00000415046 SKIV2LQ15477 1246 aaKnown RBP9.8□□□□□ -0.84
PTPRK-209ENST00000415046 FAM117AQ9C073 453 aa9.8□□□□□ -0.84
PTPRK-209ENST00000415046 C11orf95C9JLR9 678 aaPredicted RBP9.79□□□□□ -0.84
PTPRK-209ENST00000415046 FOXJ1Q92949 421 aa9.79□□□□□ -0.84
PTPRK-209ENST00000415046 PLEKHG3A1L390 1219 aa9.78□□□□□ -0.84
PTPRK-209ENST00000415046 FAM174AQ8TBP5 190 aa9.78□□□□□ -0.84
PTPRK-209ENST00000415046 ARMC2Q8NEN0 867 aa9.77□□□□□ -0.85
PTPRK-209ENST00000415046 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.77□□□□□ -0.85
PTPRK-209ENST00000415046 C4orf48Q5BLP8 95 aa9.76□□□□□ -0.85
PTPRK-209ENST00000415046 TRIM47Q96LD4 638 aa9.76□□□□□ -0.85
PTPRK-209ENST00000415046 SENP2Q9HC62 589 aa9.76□□□□□ -0.85
PTPRK-209ENST00000415046 NBPF14Q5TI25 921 aa9.75□□□□□ -0.85
PTPRK-209ENST00000415046 FBXO31Q5XUX0 539 aaPredicted RBP9.75□□□□□ -0.85
PTPRK-209ENST00000415046 BPHLQ86WA6 291 aaPredicted RBP9.75□□□□□ -0.85
PTPRK-209ENST00000415046 CDK15Q96Q40 435 aa9.75□□□□□ -0.85
PTPRK-209ENST00000415046 CAPN5O15484 640 aaPredicted RBP9.74□□□□□ -0.85
PTPRK-209ENST00000415046 NNTQ13423 1086 aa9.74□□□□□ -0.85
PTPRK-209ENST00000415046 PPP2R2DQ66LE6 453 aa9.74□□□□□ -0.85
PTPRK-209ENST00000415046 PROCA1Q8NCQ7 364 aaPredicted RBP9.74□□□□□ -0.85
PTPRK-209ENST00000415046 ADH1CP00326 375 aa9.73□□□□□ -0.85
PTPRK-209ENST00000415046 CTDSPL2Q05D32 466 aa9.73□□□□□ -0.85
PTPRK-209ENST00000415046 SH3RF1Q7Z6J0 888 aa9.73□□□□□ -0.85
PTPRK-209ENST00000415046 C1QTNF2Q9BXJ5 285 aa9.73□□□□□ -0.85
PTPRK-209ENST00000415046 SNRPBP14678 240 aaKnown RBP9.72□□□□□ -0.85
PTPRK-209ENST00000415046 AGERQ15109 404 aa9.72□□□□□ -0.85
PTPRK-209ENST00000415046 SH3BP5LQ7L8J4 393 aa9.72□□□□□ -0.85
PTPRK-209ENST00000415046 KIFC2Q96AC6 838 aa9.72□□□□□ -0.85
PTPRK-209ENST00000415046 BMP1P13497 986 aa9.71□□□□□ -0.86
PTPRK-209ENST00000415046 TRIM46Q7Z4K8 759 aa9.71□□□□□ -0.86
PTPRK-209ENST00000415046 GPKOWQ92917 476 aaPredicted RBP eCLIP9.71□□□□□ -0.86
PTPRK-209ENST00000415046 LCE2AQ5TA79 106 aaPredicted RBP9.7□□□□□ -0.86
PTPRK-209ENST00000415046 TIMP2P16035 220 aa9.69□□□□□ -0.86
PTPRK-209ENST00000415046 TREML4Q6UXN2 200 aa9.69□□□□□ -0.86
PTPRK-209ENST00000415046 LRRN4Q8WUT4 740 aa9.69□□□□□ -0.86
PTPRK-209ENST00000415046 KLF16Q9BXK1 252 aaPredicted RBP9.69□□□□□ -0.86
PTPRK-209ENST00000415046 NR5A1Q13285 461 aa9.68□□□□□ -0.86
PTPRK-209ENST00000415046 ARID5BQ14865 1188 aa9.68□□□□□ -0.86
PTPRK-209ENST00000415046 TRMT44Q8IYL2 757 aaKnown RBP9.68□□□□□ -0.86
PTPRK-209ENST00000415046 GRM5P41594 1212 aa9.67□□□□□ -0.86
PTPRK-209ENST00000415046 WDR4P57081 412 aaKnown RBP9.67□□□□□ -0.86
PTPRK-209ENST00000415046 GOPCQ9HD26 462 aa9.67□□□□□ -0.86
PTPRK-209ENST00000415046 MAP4K5Q9Y4K4 846 aa9.67□□□□□ -0.86
PTPRK-209ENST00000415046 NR3C2P08235 984 aa9.66□□□□□ -0.86
PTPRK-209ENST00000415046 FKBPLQ9UIM3 349 aa9.66□□□□□ -0.86
PTPRK-209ENST00000415046 ATP1B4Q9UN42 357 aaPredicted RBP9.66□□□□□ -0.86
PTPRK-209ENST00000415046 ZC3H4Q9UPT8 1303 aaKnown RBP9.65□□□□□ -0.86
PTPRK-209ENST00000415046 MAGEB6P1A0A0J9YX57 407 aa9.65□□□□□ -0.86
PTPRK-209ENST00000415046 NEUROD2Q15784 382 aa9.65□□□□□ -0.86
PTPRK-209ENST00000415046 PDXDC2PQ6P474 469 aa9.65□□□□□ -0.86
PTPRK-209ENST00000415046 AP1G2O75843 785 aa9.64□□□□□ -0.87
PTPRK-209ENST00000415046 NFX1Q12986 1120 aaKnown RBP9.64□□□□□ -0.87
PTPRK-209ENST00000415046 WFS1O76024 890 aa9.63□□□□□ -0.87
PTPRK-209ENST00000415046 FSHRP23945 695 aa9.63□□□□□ -0.87
PTPRK-209ENST00000415046 NR6A1Q15406 480 aa9.63□□□□□ -0.87
PTPRK-209ENST00000415046 ERFEQ4G0M1 354 aa9.63□□□□□ -0.87
PTPRK-209ENST00000415046 MRPL14Q6P1L8 145 aaKnown RBP9.63□□□□□ -0.87
PTPRK-209ENST00000415046 CARD14Q9BXL6 1004 aa9.63□□□□□ -0.87
PTPRK-209ENST00000415046 ZIC2O95409 532 aaPredicted RBP9.62□□□□□ -0.87
PTPRK-209ENST00000415046 USP17L8P0C7I0 530 aa9.62□□□□□ -0.87
PTPRK-209ENST00000415046 RFC5P40937 340 aa9.62□□□□□ -0.87
PTPRK-209ENST00000415046 ITPKCQ96DU7 683 aa9.62□□□□□ -0.87
PTPRK-209ENST00000415046 ZFP42Q96MM3 310 aa9.62□□□□□ -0.87
PTPRK-209ENST00000415046 ZFAND3Q9H8U3 227 aa9.62□□□□□ -0.87
PTPRK-209ENST00000415046 VASH1Q7L8A9 365 aaPredicted RBP9.61□□□□□ -0.87
PTPRK-209ENST00000415046 PCMTD1Q96MG8 357 aaPredicted RBP9.61□□□□□ -0.87
PTPRK-209ENST00000415046 ARHGAP9Q9BRR9 750 aa9.61□□□□□ -0.87
PTPRK-209ENST00000415046 TERTO14746 1132 aaKnown RBP9.6□□□□□ -0.87
PTPRK-209ENST00000415046 BRPF1P55201 1214 aaPredicted RBP9.6□□□□□ -0.87
PTPRK-209ENST00000415046 HMX1Q9NP08 348 aaPredicted RBP9.6□□□□□ -0.87
PTPRK-209ENST00000415046 SCARF1Q14162 830 aa9.59□□□□□ -0.87
PTPRK-209ENST00000415046 GPSM3Q9Y4H4 160 aa9.59□□□□□ -0.87
PTPRK-209ENST00000415046 MEIOBQ8N635 442 aa9.58□□□□□ -0.88
PTPRK-209ENST00000415046 EPS8L1Q8TE68 723 aa9.58□□□□□ -0.88
PTPRK-209ENST00000415046 SLC10A4Q96EP9 437 aa9.58□□□□□ -0.88
PTPRK-209ENST00000415046 PURBQ96QR8 312 aaKnown RBP9.58□□□□□ -0.88
PTPRK-209ENST00000415046 OCSTAMPQ9BR26 566 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms