RNA–Protein interactions for RNA: ENST00000398541.2

RPS4XP3-201, Transcript of ribosomal protein S4X pseudogene 3, humanhuman

BASIC

Gene RPS4XP3, Length 413 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP3-201ENST00000398541 NUTM2DQ5VT03 806 aaPredicted RBP5.46□□□□□ -1.54
RPS4XP3-201ENST00000398541 LYPD8Q6UX82 237 aa5.46□□□□□ -1.54
RPS4XP3-201ENST00000398541 NUTM2AQ8IVF1 878 aaPredicted RBP5.46□□□□□ -1.54
RPS4XP3-201ENST00000398541 SNIP1Q8TAD8 396 aaKnown RBP5.46□□□□□ -1.54
RPS4XP3-201ENST00000398541 POLR3EQ9NVU0 708 aa5.46□□□□□ -1.54
RPS4XP3-201ENST00000398541 LILRB3O75022 631 aa5.45□□□□□ -1.54
RPS4XP3-201ENST00000398541 PDIA4P13667 645 aaKnown RBP5.45□□□□□ -1.54
RPS4XP3-201ENST00000398541 CLK2P49760 499 aaKnown RBP5.45□□□□□ -1.54
RPS4XP3-201ENST00000398541 KCNH2Q12809 1159 aa5.45□□□□□ -1.54
RPS4XP3-201ENST00000398541 TSC1Q92574 1164 aa5.45□□□□□ -1.54
RPS4XP3-201ENST00000398541 FAM117AQ9C073 453 aa5.45□□□□□ -1.54
RPS4XP3-201ENST00000398541 UNC93B1Q9H1C4 597 aa5.45□□□□□ -1.54
RPS4XP3-201ENST00000398541 ST8SIA5O15466 376 aa5.44□□□□□ -1.54
RPS4XP3-201ENST00000398541 CTHP32929 405 aa5.44□□□□□ -1.54
RPS4XP3-201ENST00000398541 DDRGK1Q96HY6 314 aa5.44□□□□□ -1.54
RPS4XP3-201ENST00000398541 J3QL48 77 aa5.43□□□□□ -1.54
RPS4XP3-201ENST00000398541 PER1O15534 1290 aaPredicted RBP5.43□□□□□ -1.54
RPS4XP3-201ENST00000398541 SMPD1P17405 629 aa5.43□□□□□ -1.54
RPS4XP3-201ENST00000398541 SH3BP2P78314 561 aa5.43□□□□□ -1.54
RPS4XP3-201ENST00000398541 LINC01559Q495D7 138 aa5.43□□□□□ -1.54
RPS4XP3-201ENST00000398541 RTL5Q5HYW3 569 aaPredicted RBP5.43□□□□□ -1.54
RPS4XP3-201ENST00000398541 ZNF787Q6DD87 383 aa5.43□□□□□ -1.54
RPS4XP3-201ENST00000398541 EHBP1Q8NDI1 1231 aa5.43□□□□□ -1.54
RPS4XP3-201ENST00000398541 BAP1Q92560 729 aa5.43□□□□□ -1.54
RPS4XP3-201ENST00000398541 AAASQ9NRG9 546 aa5.43□□□□□ -1.54
RPS4XP3-201ENST00000398541 AVPP01185 164 aa5.42□□□□□ -1.54
RPS4XP3-201ENST00000398541 SKIV2LQ15477 1246 aaKnown RBP5.42□□□□□ -1.54
RPS4XP3-201ENST00000398541 CRIPAKQ8N1N5 446 aa5.42□□□□□ -1.54
RPS4XP3-201ENST00000398541 HELBQ8NG08 1087 aaPredicted RBP5.42□□□□□ -1.54
RPS4XP3-201ENST00000398541 MAP10Q9P2G4 905 aa5.42□□□□□ -1.54
RPS4XP3-201ENST00000398541 PLEKHG3A1L390 1219 aa5.41□□□□□ -1.54
RPS4XP3-201ENST00000398541 AXIN1O15169 862 aa5.41□□□□□ -1.54
RPS4XP3-201ENST00000398541 SIAH2O43255 324 aa5.41□□□□□ -1.54
RPS4XP3-201ENST00000398541 ALDH1A1P00352 501 aa5.41□□□□□ -1.54
RPS4XP3-201ENST00000398541 F12P00748 615 aaPredicted RBP5.41□□□□□ -1.54
RPS4XP3-201ENST00000398541 CTC1Q2NKJ3 1217 aa5.41□□□□□ -1.54
RPS4XP3-201ENST00000398541 SH3D19Q5HYK7 790 aa5.41□□□□□ -1.54
RPS4XP3-201ENST00000398541 ZNF511Q8NB15 262 aa5.41□□□□□ -1.54
RPS4XP3-201ENST00000398541 ARID3CA6NKF2 412 aa5.4□□□□□ -1.54
RPS4XP3-201ENST00000398541 APBB1O00213 710 aa5.4□□□□□ -1.54
RPS4XP3-201ENST00000398541 SMCPP49901 116 aaPredicted RBP5.4□□□□□ -1.54
RPS4XP3-201ENST00000398541 PROCA1Q8NCQ7 364 aaPredicted RBP5.4□□□□□ -1.54
RPS4XP3-201ENST00000398541 IL27Q8NEV9 243 aa5.4□□□□□ -1.54
RPS4XP3-201ENST00000398541 HPS1Q92902 700 aa5.4□□□□□ -1.54
RPS4XP3-201ENST00000398541 DACH1Q9UI36 760 aa5.4□□□□□ -1.54
RPS4XP3-201ENST00000398541 ATP1B4Q9UN42 357 aaPredicted RBP5.4□□□□□ -1.54
RPS4XP3-201ENST00000398541 POTECB2RU33 542 aa5.39□□□□□ -1.55
RPS4XP3-201ENST00000398541 VARSP26640 1264 aaKnown RBP5.38□□□□□ -1.55
RPS4XP3-201ENST00000398541 CTDSPL2Q05D32 466 aa5.38□□□□□ -1.55
RPS4XP3-201ENST00000398541 FBXO31Q5XUX0 539 aaPredicted RBP5.38□□□□□ -1.55
RPS4XP3-201ENST00000398541 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.38□□□□□ -1.55
RPS4XP3-201ENST00000398541 WASF2Q9Y6W5 498 aa5.38□□□□□ -1.55
RPS4XP3-201ENST00000398541 FOXJ1Q92949 421 aa5.37□□□□□ -1.55
RPS4XP3-201ENST00000398541 TLL2Q9Y6L7 1015 aa5.37□□□□□ -1.55
RPS4XP3-201ENST00000398541 AGERQ15109 404 aa5.36□□□□□ -1.55
RPS4XP3-201ENST00000398541 PPP2R2DQ66LE6 453 aa5.36□□□□□ -1.55
RPS4XP3-201ENST00000398541 ARMC2Q8NEN0 867 aa5.36□□□□□ -1.55
RPS4XP3-201ENST00000398541 FAM174AQ8TBP5 190 aa5.36□□□□□ -1.55
RPS4XP3-201ENST00000398541 FLIIQ13045 1269 aa5.35□□□□□ -1.55
RPS4XP3-201ENST00000398541 C4orf48Q5BLP8 95 aa5.35□□□□□ -1.55
RPS4XP3-201ENST00000398541 BPHLQ86WA6 291 aaPredicted RBP5.35□□□□□ -1.55
RPS4XP3-201ENST00000398541 MPNDQ8N594 471 aa5.35□□□□□ -1.55
RPS4XP3-201ENST00000398541 LRRN4Q8WUT4 740 aa5.35□□□□□ -1.55
RPS4XP3-201ENST00000398541 GMPR2Q9P2T1 348 aaKnown RBP5.35□□□□□ -1.55
RPS4XP3-201ENST00000398541 C11orf95C9JLR9 678 aaPredicted RBP5.34□□□□□ -1.55
RPS4XP3-201ENST00000398541 AP1G2O75843 785 aa5.34□□□□□ -1.55
RPS4XP3-201ENST00000398541 ARID5BQ14865 1188 aa5.34□□□□□ -1.55
RPS4XP3-201ENST00000398541 NBPF14Q5TI25 921 aa5.34□□□□□ -1.55
RPS4XP3-201ENST00000398541 CCDC82Q8N4S0 544 aa5.34□□□□□ -1.55
RPS4XP3-201ENST00000398541 KCTD17Q8N5Z5 321 aa5.34□□□□□ -1.55
RPS4XP3-201ENST00000398541 GOPCQ9HD26 462 aa5.34□□□□□ -1.55
RPS4XP3-201ENST00000398541 ATP13A2Q9NQ11 1180 aa5.34□□□□□ -1.55
RPS4XP3-201ENST00000398541 CAPN5O15484 640 aaPredicted RBP5.33□□□□□ -1.56
RPS4XP3-201ENST00000398541 NNTQ13423 1086 aa5.33□□□□□ -1.56
RPS4XP3-201ENST00000398541 SH3BP5LQ7L8J4 393 aa5.33□□□□□ -1.56
RPS4XP3-201ENST00000398541 ZNF775Q96BV0 537 aaPredicted RBP5.33□□□□□ -1.56
RPS4XP3-201ENST00000398541 PCMTD1Q96MG8 357 aaPredicted RBP5.33□□□□□ -1.56
RPS4XP3-201ENST00000398541 CDK15Q96Q40 435 aa5.33□□□□□ -1.56
RPS4XP3-201ENST00000398541 MAGEB6P1A0A0J9YX57 407 aa5.32□□□□□ -1.56
RPS4XP3-201ENST00000398541 LOC105371045A0A1W2PR82 267 aa5.32□□□□□ -1.56
RPS4XP3-201ENST00000398541 ADH1CP00326 375 aa5.32□□□□□ -1.56
RPS4XP3-201ENST00000398541 RFC5P40937 340 aa5.32□□□□□ -1.56
RPS4XP3-201ENST00000398541 NR6A1Q15406 480 aa5.32□□□□□ -1.56
RPS4XP3-201ENST00000398541 SH3RF1Q7Z6J0 888 aa5.32□□□□□ -1.56
RPS4XP3-201ENST00000398541 GPKOWQ92917 476 aaPredicted RBP eCLIP5.32□□□□□ -1.56
RPS4XP3-201ENST00000398541 TRAIPQ9BWF2 469 aa5.32□□□□□ -1.56
RPS4XP3-201ENST00000398541 FKBPLQ9UIM3 349 aa5.32□□□□□ -1.56
RPS4XP3-201ENST00000398541 A6NJR5 290 aa5.31□□□□□ -1.56
RPS4XP3-201ENST00000398541 USP17L8P0C7I0 530 aa5.31□□□□□ -1.56
RPS4XP3-201ENST00000398541 C1QTNF2Q9BXJ5 285 aa5.31□□□□□ -1.56
RPS4XP3-201ENST00000398541 CARD14Q9BXL6 1004 aa5.31□□□□□ -1.56
RPS4XP3-201ENST00000398541 SENP2Q9HC62 589 aa5.31□□□□□ -1.56
RPS4XP3-201ENST00000398541 RAD21O60216 631 aa5.3□□□□□ -1.56
RPS4XP3-201ENST00000398541 BMP1P13497 986 aa5.3□□□□□ -1.56
RPS4XP3-201ENST00000398541 SNRPBP14678 240 aaKnown RBP5.3□□□□□ -1.56
RPS4XP3-201ENST00000398541 GRM5P41594 1212 aa5.3□□□□□ -1.56
RPS4XP3-201ENST00000398541 WDR4P57081 412 aaKnown RBP5.3□□□□□ -1.56
RPS4XP3-201ENST00000398541 NR5A1Q13285 461 aa5.3□□□□□ -1.56
RPS4XP3-201ENST00000398541 PDXDC2PQ6P474 469 aa5.3□□□□□ -1.56
RPS4XP3-201ENST00000398541 TRIM47Q96LD4 638 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms