RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 AKNAQ7Z591 1439 aa20.08■□□□□ 0.8
TSPAN3-201ENST00000267970 RBM25P49756 843 aaKnown RBP20.08■□□□□ 0.8
TSPAN3-201ENST00000267970 DCTN1Q14203 1278 aa20.08■□□□□ 0.8
TSPAN3-201ENST00000267970 BRMS1Q9HCU9 246 aa20.08■□□□□ 0.8
TSPAN3-201ENST00000267970 AEBP1Q8IUX7 1158 aa20.07■□□□□ 0.8
TSPAN3-201ENST00000267970 SPINK5Q9NQ38 1064 aaPredicted RBP20.07■□□□□ 0.8
TSPAN3-201ENST00000267970 TAX1BP1Q86VP1 789 aa20.07■□□□□ 0.8
TSPAN3-201ENST00000267970 ROCK1Q13464 1354 aa20.06■□□□□ 0.8
TSPAN3-201ENST00000267970 EXOSC9Q06265 439 aaKnown RBP20.06■□□□□ 0.8
TSPAN3-201ENST00000267970 MAGEC2Q9UBF1 373 aaPredicted RBP20.05■□□□□ 0.8
TSPAN3-201ENST00000267970 GNAI1P63096 354 aa20.05■□□□□ 0.8
TSPAN3-201ENST00000267970 STK38Q15208 465 aa20.05■□□□□ 0.8
TSPAN3-201ENST00000267970 TMX1Q9H3N1 280 aa20.05■□□□□ 0.8
TSPAN3-201ENST00000267970 NINLQ9Y2I6 1382 aa20.05■□□□□ 0.8
TSPAN3-201ENST00000267970 CDK5RAP3Q96JB5 506 aa20.05■□□□□ 0.8
TSPAN3-201ENST00000267970 NLRP2Q9NX02 1062 aa20.04■□□□□ 0.8
TSPAN3-201ENST00000267970 PSMA5P28066 241 aa20.04■□□□□ 0.8
TSPAN3-201ENST00000267970 ENOX2Q16206 610 aaKnown RBP20.04■□□□□ 0.8
TSPAN3-201ENST00000267970 KRT18P05783 430 aaKnown RBP20.04■□□□□ 0.8
TSPAN3-201ENST00000267970 CCDC18Q5T9S5 1454 aa20.04■□□□□ 0.8
TSPAN3-201ENST00000267970 RAPGEF2Q9Y4G8 1499 aa20.04■□□□□ 0.8
TSPAN3-201ENST00000267970 PAF1Q8N7H5 531 aa20.03■□□□□ 0.8
TSPAN3-201ENST00000267970 MTHFSP49914 203 aa20.03■□□□□ 0.8
TSPAN3-201ENST00000267970 TANGO6Q9C0B7 1094 aa20.03■□□□□ 0.8
TSPAN3-201ENST00000267970 TRERF1Q96PN7 1200 aa20.03■□□□□ 0.8
TSPAN3-201ENST00000267970 GRPEL1Q9HAV7 217 aa20.03■□□□□ 0.8
TSPAN3-201ENST00000267970 TNMDQ9H2S6 317 aa20.02■□□□□ 0.8
TSPAN3-201ENST00000267970 ERCC4Q92889 916 aaPredicted RBP20.02■□□□□ 0.8
TSPAN3-201ENST00000267970 VGFO15240 615 aaPredicted RBP20.02■□□□□ 0.8
TSPAN3-201ENST00000267970 CAMK4Q16566 473 aa20.02■□□□□ 0.8
TSPAN3-201ENST00000267970 ME1P48163 572 aa20.02■□□□□ 0.79
TSPAN3-201ENST00000267970 FILIP1LQ4L180 1135 aa20.01■□□□□ 0.79
TSPAN3-201ENST00000267970 TAF3Q5VWG9 929 aa20.01■□□□□ 0.79
TSPAN3-201ENST00000267970 SMARCE1Q969G3 411 aa20.01■□□□□ 0.79
TSPAN3-201ENST00000267970 SEPT11Q9NVA2 429 aaKnown RBP20.01■□□□□ 0.79
TSPAN3-201ENST00000267970 XBP1P17861 261 aa20■□□□□ 0.79
TSPAN3-201ENST00000267970 TCP11L2Q8N4U5 519 aa20■□□□□ 0.79
TSPAN3-201ENST00000267970 CCDC7Q96M83 1385 aa20■□□□□ 0.79
TSPAN3-201ENST00000267970 NUP133Q8WUM0 1156 aa20■□□□□ 0.79
TSPAN3-201ENST00000267970 DEF6Q9H4E7 631 aa19.99■□□□□ 0.79
TSPAN3-201ENST00000267970 HSP90AB4PQ58FF6 505 aa19.99■□□□□ 0.79
TSPAN3-201ENST00000267970 CBX1P83916 185 aa19.99■□□□□ 0.79
TSPAN3-201ENST00000267970 FILIP1Q7Z7B0 1213 aa19.99■□□□□ 0.79
TSPAN3-201ENST00000267970 CLASRPQ8N2M8 674 aaKnown RBP19.99■□□□□ 0.79
TSPAN3-201ENST00000267970 RBM42Q9BTD8 480 aaKnown RBP19.99■□□□□ 0.79
TSPAN3-201ENST00000267970 ZNF644Q9H582 1327 aaPredicted RBP19.98■□□□□ 0.79
TSPAN3-201ENST00000267970 CCDC181Q5TID7 509 aa19.98■□□□□ 0.79
TSPAN3-201ENST00000267970 TTC39AQ5SRH9 613 aa19.98■□□□□ 0.79
TSPAN3-201ENST00000267970 RAPGEF4Q8WZA2 1011 aa19.98■□□□□ 0.79
TSPAN3-201ENST00000267970 CCDC112Q8NEF3 446 aa19.98■□□□□ 0.79
TSPAN3-201ENST00000267970 LRRFIP2Q9Y608 721 aaKnown RBP19.97■□□□□ 0.79
TSPAN3-201ENST00000267970 LETM1O95202 739 aaPredicted RBP19.97■□□□□ 0.79
TSPAN3-201ENST00000267970 SYCP1Q15431 976 aa19.97■□□□□ 0.79
TSPAN3-201ENST00000267970 DDX54Q8TDD1 881 aaKnown RBP19.97■□□□□ 0.79
TSPAN3-201ENST00000267970 RUSC2Q8N2Y8 1516 aa19.96■□□□□ 0.79
TSPAN3-201ENST00000267970 CCDC102AQ96A19 550 aa19.96■□□□□ 0.79
TSPAN3-201ENST00000267970 WASHC2AQ641Q2 1341 aa19.96■□□□□ 0.79
TSPAN3-201ENST00000267970 KIAA0754O94854 1291 aa19.96■□□□□ 0.79
TSPAN3-201ENST00000267970 PRKAR2BP31323 418 aa19.96■□□□□ 0.79
TSPAN3-201ENST00000267970 MYL6BP14649 208 aa19.95■□□□□ 0.78
TSPAN3-201ENST00000267970 PPFIBP1Q86W92 1011 aa19.95■□□□□ 0.78
TSPAN3-201ENST00000267970 CCAR1Q8IX12 1150 aaKnown RBP19.95■□□□□ 0.78
TSPAN3-201ENST00000267970 BAZ1AQ9NRL2 1556 aaPredicted RBP19.95■□□□□ 0.78
TSPAN3-201ENST00000267970 ZFP91Q96JP5 570 aaPredicted RBP19.95■□□□□ 0.78
TSPAN3-201ENST00000267970 SEPT7Q16181 437 aaKnown RBP19.95■□□□□ 0.78
TSPAN3-201ENST00000267970 MTERF4Q7Z6M4 381 aaKnown RBP19.95■□□□□ 0.78
TSPAN3-201ENST00000267970 MBD3O95983 291 aa19.94■□□□□ 0.78
TSPAN3-201ENST00000267970 CCDC85AQ96PX6 553 aaPredicted RBP19.94■□□□□ 0.78
TSPAN3-201ENST00000267970 SLC4A2P04920 1241 aa19.94■□□□□ 0.78
TSPAN3-201ENST00000267970 CCDC192P0DO97 292 aa19.94■□□□□ 0.78
TSPAN3-201ENST00000267970 DDX11Q96FC9 970 aa19.94■□□□□ 0.78
TSPAN3-201ENST00000267970 PDCL3Q9H2J4 239 aa19.94■□□□□ 0.78
TSPAN3-201ENST00000267970 CNNM1Q9NRU3 951 aa19.93■□□□□ 0.78
TSPAN3-201ENST00000267970 SYCE3A1L190 88 aa19.93■□□□□ 0.78
TSPAN3-201ENST00000267970 SART3Q15020 963 aaKnown RBP19.93■□□□□ 0.78
TSPAN3-201ENST00000267970 CWC27Q6UX04 472 aaKnown RBP19.93■□□□□ 0.78
TSPAN3-201ENST00000267970 ZNF396Q96N95 335 aaPredicted RBP19.93■□□□□ 0.78
TSPAN3-201ENST00000267970 TBC1D2BQ9UPU7 963 aa19.93■□□□□ 0.78
TSPAN3-201ENST00000267970 GOLGA6L10A6NI86 522 aa19.93■□□□□ 0.78
TSPAN3-201ENST00000267970 SSBP05455 408 aaKnown RBP eCLIP19.93■□□□□ 0.78
TSPAN3-201ENST00000267970 TWISTNBQ3B726 338 aaPredicted RBP19.93■□□□□ 0.78
TSPAN3-201ENST00000267970 PPP1R1BQ9UD71 204 aaPredicted RBP19.93■□□□□ 0.78
TSPAN3-201ENST00000267970 K7ELQ4 463 aaPredicted RBP19.92■□□□□ 0.78
TSPAN3-201ENST00000267970 ZBTB9Q96C00 473 aa19.92■□□□□ 0.78
TSPAN3-201ENST00000267970 LARP1BQ659C4 914 aaKnown RBP19.92■□□□□ 0.78
TSPAN3-201ENST00000267970 NLRP6P59044 892 aa19.92■□□□□ 0.78
TSPAN3-201ENST00000267970 MYO6Q9UM54 1294 aa19.92■□□□□ 0.78
TSPAN3-201ENST00000267970 FKBP4Q02790 459 aaKnown RBP eCLIP19.91■□□□□ 0.78
TSPAN3-201ENST00000267970 LARP6Q9BRS8 491 aaKnown RBP19.91■□□□□ 0.78
TSPAN3-201ENST00000267970 CNTLNQ9NXG0 1405 aa19.91■□□□□ 0.78
TSPAN3-201ENST00000267970 IL1RAPL2Q9NP60 686 aa19.91■□□□□ 0.78
TSPAN3-201ENST00000267970 CYP46A1Q9Y6A2 500 aa19.91■□□□□ 0.78
TSPAN3-201ENST00000267970 DNA2P51530 1060 aa19.91■□□□□ 0.78
TSPAN3-201ENST00000267970 RABEP1Q15276 862 aa19.91■□□□□ 0.78
TSPAN3-201ENST00000267970 ZNHIT6Q9NWK9 470 aaKnown RBP19.91■□□□□ 0.78
TSPAN3-201ENST00000267970 TXLNAP40222 546 aa19.9■□□□□ 0.78
TSPAN3-201ENST00000267970 TICAM2Q86XR7 235 aa19.9■□□□□ 0.78
TSPAN3-201ENST00000267970 MROH2BQ7Z745 1585 aa19.9■□□□□ 0.78
TSPAN3-201ENST00000267970 UACAQ9BZF9 1416 aa19.9■□□□□ 0.78
TSPAN3-201ENST00000267970 STRN4Q9NRL3 753 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms