RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 ZNF177Q13360 481 aaPredicted RBP19.1■□□□□ 0.65
SSBP4-212ENST00000601919 SKIV2LQ15477 1246 aaKnown RBP19.1■□□□□ 0.65
SSBP4-212ENST00000601919 MPPE1Q53F39 396 aa19.1■□□□□ 0.65
SSBP4-212ENST00000601919 HABP4Q5JVS0 413 aaKnown RBP19.1■□□□□ 0.65
SSBP4-212ENST00000601919 MPP7Q5T2T1 576 aa19.1■□□□□ 0.65
SSBP4-212ENST00000601919 C8orf74Q6P047 294 aa19.1■□□□□ 0.65
SSBP4-212ENST00000601919 NPNTQ6UXI9 565 aa19.1■□□□□ 0.65
SSBP4-212ENST00000601919 LRRC49Q8IUZ0 686 aa19.1■□□□□ 0.65
SSBP4-212ENST00000601919 CDKL3Q8IVW4 592 aaPredicted RBP19.1■□□□□ 0.65
SSBP4-212ENST00000601919 DEFB123Q8N688 67 aa19.1■□□□□ 0.65
SSBP4-212ENST00000601919 SLC35B2Q8TB61 432 aa19.1■□□□□ 0.65
SSBP4-212ENST00000601919 BPIFB1Q8TDL5 484 aa19.1■□□□□ 0.65
SSBP4-212ENST00000601919 ATG4AQ8WYN0 398 aa19.1■□□□□ 0.65
SSBP4-212ENST00000601919 UBXN4Q92575 508 aa19.1■□□□□ 0.65
SSBP4-212ENST00000601919 CCDC114Q96M63 670 aa19.1■□□□□ 0.65
SSBP4-212ENST00000601919 THG1LQ9NWX6 298 aaKnown RBP19.1■□□□□ 0.65
SSBP4-212ENST00000601919 DTLQ9NZJ0 730 aa19.1■□□□□ 0.65
SSBP4-212ENST00000601919 SAE1Q9UBE0 346 aaPredicted RBP19.1■□□□□ 0.65
SSBP4-212ENST00000601919 CDH22Q9UJ99 828 aa19.1■□□□□ 0.65
SSBP4-212ENST00000601919 ZNF148Q9UQR1 794 aa19.1■□□□□ 0.65
SSBP4-212ENST00000601919 CFAP69A5D8W1 941 aa19.09■□□□□ 0.65
SSBP4-212ENST00000601919 TSPAN3O60637 253 aa19.09■□□□□ 0.65
SSBP4-212ENST00000601919 RBP3P10745 1247 aa19.09■□□□□ 0.65
SSBP4-212ENST00000601919 OR1E1P30953 314 aa19.09■□□□□ 0.65
SSBP4-212ENST00000601919 YBEYP58557 167 aaPredicted RBP19.09■□□□□ 0.65
SSBP4-212ENST00000601919 DR1Q01658 176 aa19.09■□□□□ 0.65
SSBP4-212ENST00000601919 ALFQ53S48 1182 aa19.09■□□□□ 0.65
SSBP4-212ENST00000601919 TEX35Q5T0J7 233 aa19.09■□□□□ 0.65
SSBP4-212ENST00000601919 ARTNQ5T4W7 220 aa19.09■□□□□ 0.65
SSBP4-212ENST00000601919 C6orf118Q5T5N4 469 aa19.09■□□□□ 0.65
SSBP4-212ENST00000601919 DARS2Q6PI48 645 aaKnown RBP19.09■□□□□ 0.65
SSBP4-212ENST00000601919 SYDE1Q6ZW31 735 aaPredicted RBP19.09■□□□□ 0.65
SSBP4-212ENST00000601919 Q7L0L9 218 aa19.09■□□□□ 0.65
SSBP4-212ENST00000601919 OTOP3Q7RTS5 596 aa19.09■□□□□ 0.65
SSBP4-212ENST00000601919 TFAP2DQ7Z6R9 452 aa19.09■□□□□ 0.65
SSBP4-212ENST00000601919 ZC3H18Q86VM9 953 aaKnown RBP19.09■□□□□ 0.65
SSBP4-212ENST00000601919 UMODL1-AS1Q8N2C9 162 aa19.09■□□□□ 0.65
SSBP4-212ENST00000601919 NOA1Q8NC60 698 aaKnown RBP19.09■□□□□ 0.65
SSBP4-212ENST00000601919 SUSD6Q92537 303 aa19.09■□□□□ 0.65
SSBP4-212ENST00000601919 PRICKLE1Q96MT3 831 aaPredicted RBP19.09■□□□□ 0.65
SSBP4-212ENST00000601919 OLFM3Q96PB7 478 aa19.09■□□□□ 0.65
SSBP4-212ENST00000601919 POMKQ9H5K3 350 aa19.09■□□□□ 0.65
SSBP4-212ENST00000601919 DNPEPQ9ULA0 475 aa19.09■□□□□ 0.65
SSBP4-212ENST00000601919 USP15Q9Y4E8 981 aaPredicted RBP19.09■□□□□ 0.65
SSBP4-212ENST00000601919 DOCK8Q8NF50 2099 aa19.09■□□□□ 0.65
SSBP4-212ENST00000601919 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.08■□□□□ 0.64
SSBP4-212ENST00000601919 FAM187AA6NFU0 413 aa19.08■□□□□ 0.64
SSBP4-212ENST00000601919 GFRA2O00451 464 aa19.08■□□□□ 0.64
SSBP4-212ENST00000601919 TRDMT1O14717 391 aaKnown RBP19.08■□□□□ 0.64
SSBP4-212ENST00000601919 SCAMP3O14828 347 aaKnown RBP19.08■□□□□ 0.64
SSBP4-212ENST00000601919 TBL1XO60907 577 aa19.08■□□□□ 0.64
SSBP4-212ENST00000601919 CNTN5O94779 1100 aa19.08■□□□□ 0.64
SSBP4-212ENST00000601919 ECEL1O95672 775 aa19.08■□□□□ 0.64
SSBP4-212ENST00000601919 STIP1P31948 543 aaKnown RBP19.08■□□□□ 0.64
SSBP4-212ENST00000601919 ETFBP38117 255 aa19.08■□□□□ 0.64
SSBP4-212ENST00000601919 RPS24P62847 133 aaKnown RBP19.08■□□□□ 0.64
SSBP4-212ENST00000601919 GALNT2Q10471 571 aa19.08■□□□□ 0.64
SSBP4-212ENST00000601919 SMAD4Q13485 552 aaKnown RBP19.08■□□□□ 0.64
SSBP4-212ENST00000601919 OASLQ15646 514 aaKnown RBP19.08■□□□□ 0.64
SSBP4-212ENST00000601919 CCDC85BQ15834 202 aaPredicted RBP19.08■□□□□ 0.64
SSBP4-212ENST00000601919 PARP15Q460N3 678 aa19.08■□□□□ 0.64
SSBP4-212ENST00000601919 MTSS1LQ765P7 747 aa19.08■□□□□ 0.64
SSBP4-212ENST00000601919 GSTA5Q7RTV2 222 aa19.08■□□□□ 0.64
SSBP4-212ENST00000601919 SETD3Q86TU7 594 aaPredicted RBP19.08■□□□□ 0.64
SSBP4-212ENST00000601919 CFAP52Q8N1V2 620 aa19.08■□□□□ 0.64
SSBP4-212ENST00000601919 NPWQ8N729 165 aa19.08■□□□□ 0.64
SSBP4-212ENST00000601919 ZNF557Q8N988 423 aaPredicted RBP19.08■□□□□ 0.64
SSBP4-212ENST00000601919 DDI1Q8WTU0 396 aa19.08■□□□□ 0.64
SSBP4-212ENST00000601919 TFB1MQ8WVM0 346 aaKnown RBP19.08■□□□□ 0.64
SSBP4-212ENST00000601919 RSAD2Q8WXG1 361 aa19.08■□□□□ 0.64
SSBP4-212ENST00000601919 SLCO2A1Q92959 643 aa19.08■□□□□ 0.64
SSBP4-212ENST00000601919 MYADMQ96S97 322 aa19.08■□□□□ 0.64
SSBP4-212ENST00000601919 FAM118BQ9BPY3 351 aa19.08■□□□□ 0.64
SSBP4-212ENST00000601919 UBE2ZQ9H832 354 aaPredicted RBP19.08■□□□□ 0.64
SSBP4-212ENST00000601919 AMACRQ9UHK6 382 aa19.08■□□□□ 0.64
SSBP4-212ENST00000601919 MFHAS1Q9Y4C4 1052 aa19.08■□□□□ 0.64
SSBP4-212ENST00000601919 NUP205Q92621 2012 aa19.08■□□□□ 0.64
SSBP4-212ENST00000601919 BCLAF3A2AJT9 711 aaKnown RBP19.07■□□□□ 0.64
SSBP4-212ENST00000601919 ARHGAP42A6NI28 874 aa19.07■□□□□ 0.64
SSBP4-212ENST00000601919 HEPACAM2A8MVW5 462 aa19.07■□□□□ 0.64
SSBP4-212ENST00000601919 MTSS1O43312 755 aa19.07■□□□□ 0.64
SSBP4-212ENST00000601919 RAMP2O60895 175 aa19.07■□□□□ 0.64
SSBP4-212ENST00000601919 LAMP2P13473 410 aa19.07■□□□□ 0.64
SSBP4-212ENST00000601919 KCNA5P22460 613 aa19.07■□□□□ 0.64
SSBP4-212ENST00000601919 IFNAR2P48551 515 aa19.07■□□□□ 0.64
SSBP4-212ENST00000601919 IRAK1P51617 712 aa19.07■□□□□ 0.64
SSBP4-212ENST00000601919 OXCT1P55809 520 aa19.07■□□□□ 0.64
SSBP4-212ENST00000601919 ZNF33AQ06730 810 aa19.07■□□□□ 0.64
SSBP4-212ENST00000601919 SLC10A2Q12908 348 aaPredicted RBP19.07■□□□□ 0.64
SSBP4-212ENST00000601919 SLC45A4Q5BKX6 768 aa19.07■□□□□ 0.64
SSBP4-212ENST00000601919 AFMIDQ63HM1 303 aa19.07■□□□□ 0.64
SSBP4-212ENST00000601919 TTC27Q6P3X3 843 aa19.07■□□□□ 0.64
SSBP4-212ENST00000601919 POTEHQ6S545 545 aa19.07■□□□□ 0.64
SSBP4-212ENST00000601919 ZNF783Q6ZMS7 281 aa19.07■□□□□ 0.64
SSBP4-212ENST00000601919 LRRN4CLQ8ND94 238 aa19.07■□□□□ 0.64
SSBP4-212ENST00000601919 MYRIPQ8NFW9 859 aa19.07■□□□□ 0.64
SSBP4-212ENST00000601919 CCHCR1Q8TD31 782 aa19.07■□□□□ 0.64
SSBP4-212ENST00000601919 OSCP1Q8WVF1 389 aa19.07■□□□□ 0.64
SSBP4-212ENST00000601919 QKIQ96PU8 341 aaKnown RBP eCLIP19.07■□□□□ 0.64
SSBP4-212ENST00000601919 DUS2Q9NX74 493 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms