RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 FDXACB1Q9BRP7 624 aaPredicted RBP10.66□□□□□ -0.7
LIG1-220ENST00000601091 TTPALQ9BTX7 342 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 FAM8A1Q9UBU6 413 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 NOX1Q9Y5S8 564 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 LACTBL1A8MY62 500 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 MYL3P08590 195 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 ACADSP16219 412 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 ARL2P36404 184 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 CD97P48960 835 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 ITKQ08881 620 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 PDK1Q15118 436 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 SLC1A5Q15758 541 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 TBCCQ15814 346 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 RABGAP1LQ5R372 815 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 FAM180BQ6P0A1 224 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 ACAD11Q709F0 780 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 UNC45BQ8IWX7 931 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 JPH3Q8WXH2 748 aaPredicted RBP10.66□□□□□ -0.7
LIG1-220ENST00000601091 MALT1Q9UDY8 824 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 FZD1Q9UP38 647 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 MRPS23Q9Y3D9 190 aaKnown RBP10.66□□□□□ -0.7
LIG1-220ENST00000601091 NHSL1Q5SYE7 1610 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 SDR42E2A6NKP2 422 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 TRDMT1O14717 391 aaKnown RBP10.66□□□□□ -0.7
LIG1-220ENST00000601091 ZCCHC18P0CG32 403 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 MCF2P10911 925 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 CYP2C9P11712 490 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 FDFT1P37268 417 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 SULT1E1P49888 294 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 CDK16Q00536 496 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 PTPN20Q4JDL3 420 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 PABPC1LQ4VXU2 614 aaKnown RBP10.66□□□□□ -0.7
LIG1-220ENST00000601091 EFHC1Q5JVL4 640 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 RNASEH2BQ5TBB1 312 aaKnown RBP10.66□□□□□ -0.7
LIG1-220ENST00000601091 DPY19L2P1Q6NXN4 242 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 KLC3Q6P597 504 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 CCNJLQ8IV13 435 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 APLFQ8IW19 511 aaPredicted RBP10.66□□□□□ -0.7
LIG1-220ENST00000601091 JOSD2Q8TAC2 188 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 CMTM5Q96DZ9 223 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 LRGUKQ96M69 825 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 NAT9Q9BTE0 207 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 CLK4Q9HAZ1 481 aaKnown RBP10.66□□□□□ -0.7
LIG1-220ENST00000601091 NTN4Q9HB63 628 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 TEKT2Q9UIF3 430 aa10.66□□□□□ -0.7
LIG1-220ENST00000601091 GIPC1O14908 333 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 VNN1O95497 513 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 POU2F1P14859 743 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 RBL1P28749 1068 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 SPRP35270 261 aaPredicted RBP10.65□□□□□ -0.7
LIG1-220ENST00000601091 ZNF143P52747 638 aaPredicted RBP10.65□□□□□ -0.7
LIG1-220ENST00000601091 MRPS15P82914 257 aaKnown RBP10.65□□□□□ -0.7
LIG1-220ENST00000601091 RPS6KA2Q15349 733 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 DCAF6Q58WW2 860 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 ITPRIPL1Q6GPH6 555 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 B3GNT9Q6UX72 402 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 CYP4V2Q6ZWL3 525 aaPredicted RBP10.65□□□□□ -0.7
LIG1-220ENST00000601091 DNAJB7Q7Z6W7 309 aaPredicted RBP10.65□□□□□ -0.7
LIG1-220ENST00000601091 TMPRSS6Q8IU80 811 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 FBXO16Q8IX29 292 aaPredicted RBP10.65□□□□□ -0.7
LIG1-220ENST00000601091 OXNAD1Q96HP4 312 aaPredicted RBP10.65□□□□□ -0.7
LIG1-220ENST00000601091 CENPKQ9BS16 269 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 CCDC28BQ9BUN5 200 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 LHX5Q9H2C1 402 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 CYLDQ9NQC7 956 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 DPP7Q9UHL4 492 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 DOLKQ9UPQ8 538 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 COL22A1Q8NFW1 1626 aaPredicted RBP10.65□□□□□ -0.7
LIG1-220ENST00000601091 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 E5RJQ4 531 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 HAT1O14929 419 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 CHADO15335 359 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 ASMTLO95671 621 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 BPNT1O95861 308 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 TRUB2O95900 331 aaKnown RBP10.65□□□□□ -0.7
LIG1-220ENST00000601091 UBTFL6P0CB48 400 aaPredicted RBP10.65□□□□□ -0.7
LIG1-220ENST00000601091 CNTFP26441 200 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 FOXN2P32314 431 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 GNL1P36915 607 aaPredicted RBP10.65□□□□□ -0.7
LIG1-220ENST00000601091 WDR4P57081 412 aaKnown RBP10.65□□□□□ -0.7
LIG1-220ENST00000601091 NIPAL4Q0D2K0 466 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 JADE1Q6IE81 842 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 NATD1Q8N6N6 113 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 CALML6Q8TD86 181 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 LRRC39Q96DD0 335 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 GIMAP5Q96F15 307 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 CPB2Q96IY4 423 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 COG8Q96MW5 612 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 TUBA1CQ9BQE3 449 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 NIFKQ9BYG3 293 aaKnown RBP10.65□□□□□ -0.7
LIG1-220ENST00000601091 NOSIPQ9Y314 301 aaKnown RBP10.65□□□□□ -0.7
LIG1-220ENST00000601091 C10orf71Q711Q0 1435 aa10.65□□□□□ -0.7
LIG1-220ENST00000601091 NBNO60934 754 aa10.65□□□□□ -0.71
LIG1-220ENST00000601091 GLRA3O75311 464 aa10.65□□□□□ -0.71
LIG1-220ENST00000601091 LRCH4O75427 683 aa10.65□□□□□ -0.71
LIG1-220ENST00000601091 S100A6P06703 90 aa10.65□□□□□ -0.71
LIG1-220ENST00000601091 CDC42EP1Q00587 391 aa10.65□□□□□ -0.71
LIG1-220ENST00000601091 SNX30Q5VWJ9 437 aa10.65□□□□□ -0.71
LIG1-220ENST00000601091 RWDD4Q6NW29 188 aaKnown RBP10.65□□□□□ -0.71
LIG1-220ENST00000601091 LRRC8BQ6P9F7 803 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms