RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 CNTN6Q9UQ52 1028 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 ERVW-1Q9UQF0 538 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 TLR6Q9Y2C9 796 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 COL5A1P20908 1838 aaPredicted RBP11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 BECN2A8MW95 431 aa11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 E5RJQ4 531 aa11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 FBXO21O94952 628 aa11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 LETM1O95202 739 aaPredicted RBP11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 LUC7L3O95232 432 aaKnown RBP11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 KRT5P13647 590 aa11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 MZF1P28698 734 aaPredicted RBP11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 RDXP35241 583 aaKnown RBP11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 CTSKP43235 329 aa11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 GRIA4P48058 902 aa11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 GCNT1Q02742 428 aa11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 SHBQ15464 509 aa11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 CCDC157Q569K6 752 aa11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 KIAA0895LQ68EN5 471 aa11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 IL27RAQ6UWB1 636 aa11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 GATAD2AQ86YP4 633 aa11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 STK40Q8N2I9 435 aa11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 WDTC1Q8N5D0 677 aa11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 AADATQ8N5Z0 425 aa11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 OR52K2Q8NGK3 314 aa11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 ZNF606Q8WXB4 792 aa11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 PTPRN2Q92932 1015 aa11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 CCDC34Q96HJ3 373 aa11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 CRACR2AQ9BSW2 395 aa11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 SRRTQ9BXP5 876 aaKnown RBP11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 CAAP1Q9H8G2 361 aa11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 UBE2TQ9NPD8 197 aaPredicted RBP11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 AJAP1Q9UKB5 411 aaPredicted RBP11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 APOBEC2Q9Y235 224 aaKnown RBP11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 GPSM3Q9Y4H4 160 aa11.96□□□□□ -0.49
PRPF40B-212ENST00000551111 TRPM6Q9BX84 2022 aa11.96□□□□□ -0.5
PRPF40B-212ENST00000551111 SMG1Q96Q15 3661 aaKnown RBP11.95□□□□□ -0.5
PRPF40B-212ENST00000551111 FLRT2O43155 660 aa11.95□□□□□ -0.5
PRPF40B-212ENST00000551111 IRAK2O43187 625 aa11.95□□□□□ -0.5
PRPF40B-212ENST00000551111 TRUB2O95900 331 aaKnown RBP11.95□□□□□ -0.5
PRPF40B-212ENST00000551111 IGLV3-25P01717 112 aa11.95□□□□□ -0.5
PRPF40B-212ENST00000551111 TACR2P21452 398 aa11.95□□□□□ -0.5
PRPF40B-212ENST00000551111 SLC8A1P32418 973 aa11.95□□□□□ -0.5
PRPF40B-212ENST00000551111 GGCXP38435 758 aa11.95□□□□□ -0.5
PRPF40B-212ENST00000551111 ZBTB16Q05516 673 aa11.95□□□□□ -0.5
PRPF40B-212ENST00000551111 EIF4EBP2Q13542 120 aaPredicted RBP11.95□□□□□ -0.5
PRPF40B-212ENST00000551111 CDH18Q13634 790 aa11.95□□□□□ -0.5
PRPF40B-212ENST00000551111 E2F5Q15329 346 aa11.95□□□□□ -0.5
PRPF40B-212ENST00000551111 STILQ15468 1287 aa11.95□□□□□ -0.5
PRPF40B-212ENST00000551111 CST6Q15828 149 aa11.95□□□□□ -0.5
PRPF40B-212ENST00000551111 TMPRSS7Q7RTY8 843 aa11.95□□□□□ -0.5
PRPF40B-212ENST00000551111 GANCQ8TET4 914 aa11.95□□□□□ -0.5
PRPF40B-212ENST00000551111 PRMT1Q99873 361 aaKnown RBP11.95□□□□□ -0.5
PRPF40B-212ENST00000551111 SGK2Q9HBY8 427 aa11.95□□□□□ -0.5
PRPF40B-212ENST00000551111 OSGEPQ9NPF4 335 aa11.95□□□□□ -0.5
PRPF40B-212ENST00000551111 KIAA1522Q9P206 1035 aaPredicted RBP11.95□□□□□ -0.5
PRPF40B-212ENST00000551111 PCDHGB2Q9Y5G2 931 aa11.95□□□□□ -0.5
PRPF40B-212ENST00000551111 SYNJ2BP-COX16A0A087WUM0 186 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 A0A1W2PPC4 97 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 FAM170AA1A519 330 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 P4HA2O15460 535 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 GRAP2O75791 330 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 RNASEH2AO75792 299 aaKnown RBP11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 AFPP02771 609 aaKnown RBP11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 PDGFRAP16234 1089 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 SLC9A1P19634 815 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 PSMD8P48556 350 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 PPP2CBP62714 309 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 PPP2CAP67775 309 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 ECT2LQ008S8 904 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 CENPCQ03188 943 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 NNTQ13423 1086 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 CAMK2BQ13554 666 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 STIM1Q13586 685 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 TEAD4Q15561 434 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 COL28A1Q2UY09 1125 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 TTC31Q49AM3 519 aaPredicted RBP11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 USP30Q70CQ3 517 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 TMEM110Q86TL2 294 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 CHSY1Q86X52 802 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 GOLGA1Q92805 767 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 IGSF8Q969P0 613 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 ALG14Q96F25 216 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 CRELD1Q96HD1 420 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 SERPINB11Q96P15 392 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 GTPBP4Q9BZE4 634 aaKnown RBP11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 CCDC86Q9H6F5 360 aaKnown RBP11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 FBRSQ9HAH7 460 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 COX16Q9P0S2 106 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 SARDHQ9UL12 918 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 RAXQ9Y2V3 346 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 GTF3C3Q9Y5Q9 886 aa11.94□□□□□ -0.5
PRPF40B-212ENST00000551111 ITIH6Q6UXX5 1313 aa11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 A0A1W2PR77 199 aa11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 TRABD2BA6NFA1 517 aa11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 KCNU1A8MYU2 1149 aa11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 RNF103O00237 685 aa11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 VILLO15195 856 aa11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 THAP12O43422 761 aa11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 PCDHGA12O60330 932 aa11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 ASLP04424 464 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms