RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 ARID5AQ03989 594 aa12.3□□□□□ -0.44
GABPB1-206ENST00000543881 CAMK2GQ13555 558 aaPredicted RBP12.3□□□□□ -0.44
GABPB1-206ENST00000543881 INAVAQ3KP66 663 aa12.3□□□□□ -0.44
GABPB1-206ENST00000543881 KCNT1Q5JUK3 1230 aa12.3□□□□□ -0.44
GABPB1-206ENST00000543881 MPP7Q5T2T1 576 aa12.3□□□□□ -0.44
GABPB1-206ENST00000543881 NUGGCQ68CJ6 796 aa12.3□□□□□ -0.44
GABPB1-206ENST00000543881 TRIM65Q6PJ69 517 aa12.3□□□□□ -0.44
GABPB1-206ENST00000543881 LRRC69Q6ZNQ3 347 aa12.3□□□□□ -0.44
GABPB1-206ENST00000543881 UNC45BQ8IWX7 931 aa12.3□□□□□ -0.44
GABPB1-206ENST00000543881 WFIKKN2Q8TEU8 576 aa12.3□□□□□ -0.44
GABPB1-206ENST00000543881 ZNF606Q8WXB4 792 aa12.3□□□□□ -0.44
GABPB1-206ENST00000543881 AZIN2Q96A70 460 aa12.3□□□□□ -0.44
GABPB1-206ENST00000543881 BIRC7Q96CA5 298 aa12.3□□□□□ -0.44
GABPB1-206ENST00000543881 SLC39A13Q96H72 371 aa12.3□□□□□ -0.44
GABPB1-206ENST00000543881 LHX5Q9H2C1 402 aa12.3□□□□□ -0.44
GABPB1-206ENST00000543881 ST7Q9NRC1 585 aa12.3□□□□□ -0.44
GABPB1-206ENST00000543881 TJP2Q9UDY2 1190 aa12.3□□□□□ -0.44
GABPB1-206ENST00000543881 XPO7Q9UIA9 1087 aaKnown RBP12.3□□□□□ -0.44
GABPB1-206ENST00000543881 E5RJQ4 531 aa12.29□□□□□ -0.44
GABPB1-206ENST00000543881 TLX3O43711 291 aaPredicted RBP12.29□□□□□ -0.44
GABPB1-206ENST00000543881 KALRNO60229 2985 aa12.29□□□□□ -0.44
GABPB1-206ENST00000543881 FSBPO95073 299 aa12.29□□□□□ -0.44
GABPB1-206ENST00000543881 FGFR1OPO95684 399 aaKnown RBP12.29□□□□□ -0.44
GABPB1-206ENST00000543881 C7P10643 843 aa12.29□□□□□ -0.44
GABPB1-206ENST00000543881 JUPP14923 745 aa12.29□□□□□ -0.44
GABPB1-206ENST00000543881 HNF1BP35680 557 aa12.29□□□□□ -0.44
GABPB1-206ENST00000543881 CTSKP43235 329 aa12.29□□□□□ -0.44
GABPB1-206ENST00000543881 RPS24P62847 133 aaKnown RBP12.29□□□□□ -0.44
GABPB1-206ENST00000543881 PITX1P78337 314 aaPredicted RBP12.29□□□□□ -0.44
GABPB1-206ENST00000543881 SEMG2Q02383 582 aa12.29□□□□□ -0.44
GABPB1-206ENST00000543881 FNDC3BQ53EP0 1204 aaKnown RBP12.29□□□□□ -0.44
GABPB1-206ENST00000543881 C6orf118Q5T5N4 469 aa12.29□□□□□ -0.44
GABPB1-206ENST00000543881 MBLAC2Q68D91 279 aa12.29□□□□□ -0.44
GABPB1-206ENST00000543881 ADAT2Q7Z6V5 191 aaKnown RBP12.29□□□□□ -0.44
GABPB1-206ENST00000543881 ZNF605Q86T29 641 aa12.29□□□□□ -0.44
GABPB1-206ENST00000543881 TMEM110Q86TL2 294 aa12.29□□□□□ -0.44
GABPB1-206ENST00000543881 TAC4Q86UU9 113 aa12.29□□□□□ -0.44
GABPB1-206ENST00000543881 AHI1Q8N157 1196 aa12.29□□□□□ -0.44
GABPB1-206ENST00000543881 WDTC1Q8N5D0 677 aa12.29□□□□□ -0.44
GABPB1-206ENST00000543881 LSM14AQ8ND56 463 aaKnown RBP12.29□□□□□ -0.44
GABPB1-206ENST00000543881 STK32AQ8WU08 396 aa12.29□□□□□ -0.44
GABPB1-206ENST00000543881 GOLGA1Q92805 767 aa12.29□□□□□ -0.44
GABPB1-206ENST00000543881 FAM149B1Q96BN6 582 aa12.29□□□□□ -0.44
GABPB1-206ENST00000543881 NUCKS1Q9H1E3 243 aaKnown RBP12.29□□□□□ -0.44
GABPB1-206ENST00000543881 STIM2Q9P246 746 aa12.29□□□□□ -0.44
GABPB1-206ENST00000543881 AJAP1Q9UKB5 411 aaPredicted RBP12.29□□□□□ -0.44
GABPB1-206ENST00000543881 INTS6Q9UL03 887 aaKnown RBP12.29□□□□□ -0.44
GABPB1-206ENST00000543881 TLR6Q9Y2C9 796 aa12.29□□□□□ -0.44
GABPB1-206ENST00000543881 RAI2Q9Y5P3 530 aa12.29□□□□□ -0.44
GABPB1-206ENST00000543881 TP53BP1Q12888 1972 aaPredicted RBP12.29□□□□□ -0.44
GABPB1-206ENST00000543881 COL5A1P20908 1838 aaPredicted RBP12.28□□□□□ -0.44
GABPB1-206ENST00000543881 RRP8O43159 456 aaKnown RBP12.28□□□□□ -0.44
GABPB1-206ENST00000543881 IRAK2O43187 625 aa12.28□□□□□ -0.44
GABPB1-206ENST00000543881 THAP12O43422 761 aa12.28□□□□□ -0.44
GABPB1-206ENST00000543881 DFNA5O60443 496 aa12.28□□□□□ -0.44
GABPB1-206ENST00000543881 SEMA4FO95754 770 aa12.28□□□□□ -0.44
GABPB1-206ENST00000543881 DLDP09622 509 aaKnown RBP12.28□□□□□ -0.44
GABPB1-206ENST00000543881 CD27P26842 260 aa12.28□□□□□ -0.44
GABPB1-206ENST00000543881 GNA15P30679 374 aa12.28□□□□□ -0.44
GABPB1-206ENST00000543881 ACADSBP45954 432 aa12.28□□□□□ -0.44
GABPB1-206ENST00000543881 CLDN6P56747 220 aa12.28□□□□□ -0.44
GABPB1-206ENST00000543881 NNTQ13423 1086 aa12.28□□□□□ -0.44
GABPB1-206ENST00000543881 TAF5Q15542 800 aa12.28□□□□□ -0.44
GABPB1-206ENST00000543881 MEA1Q16626 185 aa12.28□□□□□ -0.44
GABPB1-206ENST00000543881 ARHGAP44Q17R89 818 aa12.28□□□□□ -0.44
GABPB1-206ENST00000543881 FSCBQ5H9T9 825 aa12.28□□□□□ -0.44
GABPB1-206ENST00000543881 BEND5Q7L4P6 421 aa12.28□□□□□ -0.44
GABPB1-206ENST00000543881 ENOSF1Q7L5Y1 443 aa12.28□□□□□ -0.44
GABPB1-206ENST00000543881 CREBRFQ8IUR6 639 aa12.28□□□□□ -0.44
GABPB1-206ENST00000543881 CFAP52Q8N1V2 620 aa12.28□□□□□ -0.44
GABPB1-206ENST00000543881 MYO19Q96H55 970 aa12.28□□□□□ -0.44
GABPB1-206ENST00000543881 SERPINB11Q96P15 392 aa12.28□□□□□ -0.44
GABPB1-206ENST00000543881 FCRL3Q96P31 734 aaPredicted RBP12.28□□□□□ -0.44
GABPB1-206ENST00000543881 IRX2Q9BZI1 471 aaPredicted RBP12.28□□□□□ -0.44
GABPB1-206ENST00000543881 BTBD1Q9H0C5 482 aa12.28□□□□□ -0.44
GABPB1-206ENST00000543881 MTG2Q9H4K7 406 aa12.28□□□□□ -0.44
GABPB1-206ENST00000543881 PRSS16Q9NQE7 514 aa12.28□□□□□ -0.44
GABPB1-206ENST00000543881 PLA2G4CQ9UP65 541 aa12.28□□□□□ -0.44
GABPB1-206ENST00000543881 PCDHGA1Q9Y5H4 931 aa12.28□□□□□ -0.44
GABPB1-206ENST00000543881 AK5Q9Y6K8 562 aa12.28□□□□□ -0.44
GABPB1-206ENST00000543881 A0A1B0GTQ1 180 aa12.27□□□□□ -0.44
GABPB1-206ENST00000543881 ENC1O14682 589 aa12.27□□□□□ -0.44
GABPB1-206ENST00000543881 SART1O43290 800 aaKnown RBP12.27□□□□□ -0.44
GABPB1-206ENST00000543881 MED7O43513 233 aa12.27□□□□□ -0.44
GABPB1-206ENST00000543881 MOCS2O96007 188 aaPredicted RBP12.27□□□□□ -0.44
GABPB1-206ENST00000543881 IGLV3-25P01717 112 aa12.27□□□□□ -0.44
GABPB1-206ENST00000543881 PON1P27169 355 aa12.27□□□□□ -0.44
GABPB1-206ENST00000543881 PDCLQ13371 301 aa12.27□□□□□ -0.44
GABPB1-206ENST00000543881 EIF4EBP2Q13542 120 aaPredicted RBP12.27□□□□□ -0.44
GABPB1-206ENST00000543881 MS4A13Q5J8X5 152 aa12.27□□□□□ -0.44
GABPB1-206ENST00000543881 GBP6Q6ZN66 633 aa12.27□□□□□ -0.44
GABPB1-206ENST00000543881 MMS22LQ6ZRQ5 1243 aa12.27□□□□□ -0.44
GABPB1-206ENST00000543881 GATAD2AQ86YP4 633 aa12.27□□□□□ -0.44
GABPB1-206ENST00000543881 MFN1Q8IWA4 741 aa12.27□□□□□ -0.44
GABPB1-206ENST00000543881 ZNF843Q8N446 348 aa12.27□□□□□ -0.44
GABPB1-206ENST00000543881 HJURPQ8NCD3 748 aaPredicted RBP12.27□□□□□ -0.44
GABPB1-206ENST00000543881 FIBINQ8TAL6 211 aa12.27□□□□□ -0.44
GABPB1-206ENST00000543881 TTC17Q96AE7 1141 aa12.27□□□□□ -0.44
GABPB1-206ENST00000543881 SIX2Q9NPC8 291 aa12.27□□□□□ -0.44
GABPB1-206ENST00000543881 APEX2Q9UBZ4 518 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms