RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 BTBD6Q96KE9 485 aa20.02■□□□□ 0.8
DDX55-207ENST00000540763 PEBP4Q96S96 227 aa20.02■□□□□ 0.8
DDX55-207ENST00000540763 PPP1R9BQ96SB3 815 aa20.02■□□□□ 0.8
DDX55-207ENST00000540763 SNRNP25Q9BV90 132 aaKnown RBP20.02■□□□□ 0.8
DDX55-207ENST00000540763 IRF2BPLQ9H1B7 796 aa20.02■□□□□ 0.8
DDX55-207ENST00000540763 ABCB8Q9NUT2 735 aa20.02■□□□□ 0.8
DDX55-207ENST00000540763 KIAA1522Q9P206 1035 aaPredicted RBP20.02■□□□□ 0.8
DDX55-207ENST00000540763 GGA2Q9UJY4 613 aa20.02■□□□□ 0.8
DDX55-207ENST00000540763 AP4E1Q9UPM8 1137 aa20.02■□□□□ 0.8
DDX55-207ENST00000540763 NEU3Q9UQ49 428 aa20.02■□□□□ 0.8
DDX55-207ENST00000540763 TBC1D30Q9Y2I9 924 aa20.02■□□□□ 0.8
DDX55-207ENST00000540763 PRRT4C9JH25 899 aa20.01■□□□□ 0.79
DDX55-207ENST00000540763 NRDCO43847 1150 aa20.01■□□□□ 0.79
DDX55-207ENST00000540763 LRIG2O94898 1065 aa20.01■□□□□ 0.79
DDX55-207ENST00000540763 PAPSS2O95340 614 aaPredicted RBP20.01■□□□□ 0.79
DDX55-207ENST00000540763 HNRNPLP14866 589 aaKnown RBP eCLIP20.01■□□□□ 0.79
DDX55-207ENST00000540763 VAV2P52735 878 aa20.01■□□□□ 0.79
DDX55-207ENST00000540763 SLC25A11Q02978 314 aaKnown RBP20.01■□□□□ 0.79
DDX55-207ENST00000540763 HADHQ16836 314 aaKnown RBP20.01■□□□□ 0.79
DDX55-207ENST00000540763 GEN1Q17RS7 908 aa20.01■□□□□ 0.79
DDX55-207ENST00000540763 SETD3Q86TU7 594 aaPredicted RBP20.01■□□□□ 0.79
DDX55-207ENST00000540763 LRRC8AQ8IWT6 810 aa20.01■□□□□ 0.79
DDX55-207ENST00000540763 UCMAQ8WVF2 138 aa20.01■□□□□ 0.79
DDX55-207ENST00000540763 EPAS1Q99814 870 aa20.01■□□□□ 0.79
DDX55-207ENST00000540763 REXO2Q9Y3B8 237 aaKnown RBP20.01■□□□□ 0.79
DDX55-207ENST00000540763 CKAP5Q14008 2032 aa20■□□□□ 0.79
DDX55-207ENST00000540763 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20■□□□□ 0.79
DDX55-207ENST00000540763 PJA2O43164 708 aa20■□□□□ 0.79
DDX55-207ENST00000540763 RHOQP17081 205 aa20■□□□□ 0.79
DDX55-207ENST00000540763 CCR3P51677 355 aa20■□□□□ 0.79
DDX55-207ENST00000540763 PLK1P53350 603 aa20■□□□□ 0.79
DDX55-207ENST00000540763 LMAN2Q12907 356 aa20■□□□□ 0.79
DDX55-207ENST00000540763 ZNF177Q13360 481 aaPredicted RBP20■□□□□ 0.79
DDX55-207ENST00000540763 GAS6Q14393 721 aa20■□□□□ 0.79
DDX55-207ENST00000540763 ALFQ53S48 1182 aa20■□□□□ 0.79
DDX55-207ENST00000540763 CXorf57Q6NSI4 855 aaKnown RBP20■□□□□ 0.79
DDX55-207ENST00000540763 ZNF783Q6ZMS7 281 aa20■□□□□ 0.79
DDX55-207ENST00000540763 Q6ZS52 159 aa20■□□□□ 0.79
DDX55-207ENST00000540763 PDLIM2Q96JY6 352 aa20■□□□□ 0.79
DDX55-207ENST00000540763 ZNF212Q9UDV6 495 aa20■□□□□ 0.79
DDX55-207ENST00000540763 PCSK1NQ9UHG2 260 aa20■□□□□ 0.79
DDX55-207ENST00000540763 SNX10Q9Y5X0 201 aa20■□□□□ 0.79
DDX55-207ENST00000540763 NYNRINQ9P2P1 1898 aaKnown RBP20■□□□□ 0.79
DDX55-207ENST00000540763 FAM72CH0Y354 149 aa19.99■□□□□ 0.79
DDX55-207ENST00000540763 FGF10O15520 208 aaPredicted RBP19.99■□□□□ 0.79
DDX55-207ENST00000540763 SRGAP2O75044 1071 aa19.99■□□□□ 0.79
DDX55-207ENST00000540763 CNTN5O94779 1100 aa19.99■□□□□ 0.79
DDX55-207ENST00000540763 MOCS3O95396 460 aa19.99■□□□□ 0.79
DDX55-207ENST00000540763 ASLP04424 464 aa19.99■□□□□ 0.79
DDX55-207ENST00000540763 CD70P32970 193 aa19.99■□□□□ 0.79
DDX55-207ENST00000540763 SLC1A1P43005 524 aa19.99■□□□□ 0.79
DDX55-207ENST00000540763 MAPKAPK2P49137 400 aa19.99■□□□□ 0.79
DDX55-207ENST00000540763 IRAK1P51617 712 aa19.99■□□□□ 0.79
DDX55-207ENST00000540763 MTAPQ13126 283 aa19.99■□□□□ 0.79
DDX55-207ENST00000540763 DPYSL2Q16555 572 aa19.99■□□□□ 0.79
DDX55-207ENST00000540763 FSCBQ5H9T9 825 aa19.99■□□□□ 0.79
DDX55-207ENST00000540763 C6orf118Q5T5N4 469 aa19.99■□□□□ 0.79
DDX55-207ENST00000540763 FAM72AQ5TYM5 149 aa19.99■□□□□ 0.79
DDX55-207ENST00000540763 FAM72DQ6L9T8 149 aa19.99■□□□□ 0.79
DDX55-207ENST00000540763 ADIPOR2Q86V24 386 aa19.99■□□□□ 0.79
DDX55-207ENST00000540763 FAM72BQ86X60 149 aa19.99■□□□□ 0.79
DDX55-207ENST00000540763 CIR1Q86X95 450 aaPredicted RBP19.99■□□□□ 0.79
DDX55-207ENST00000540763 SFTPA1Q8IWL2 248 aa19.99■□□□□ 0.79
DDX55-207ENST00000540763 ZNF513Q8N8E2 541 aaPredicted RBP19.99■□□□□ 0.79
DDX55-207ENST00000540763 ACRBPQ8NEB7 543 aa19.99■□□□□ 0.79
DDX55-207ENST00000540763 RPLP0P6Q8NHW5 317 aa19.99■□□□□ 0.79
DDX55-207ENST00000540763 PRMT8Q9NR22 394 aaPredicted RBP19.99■□□□□ 0.79
DDX55-207ENST00000540763 FAM86C1Q9NVL1 165 aa19.99■□□□□ 0.79
DDX55-207ENST00000540763 TMEM248Q9NWD8 314 aa19.99■□□□□ 0.79
DDX55-207ENST00000540763 ELOVL2Q9NXB9 296 aa19.99■□□□□ 0.79
DDX55-207ENST00000540763 DONSONQ9NYP3 566 aa19.99■□□□□ 0.79
DDX55-207ENST00000540763 WASH4PA8MWX3 477 aa19.98■□□□□ 0.79
DDX55-207ENST00000540763 GALR2O43603 387 aaPredicted RBP19.98■□□□□ 0.79
DDX55-207ENST00000540763 ATP5BP06576 529 aaKnown RBP19.98■□□□□ 0.79
DDX55-207ENST00000540763 IL1R2P27930 398 aa19.98■□□□□ 0.79
DDX55-207ENST00000540763 PLEKHG6Q3KR16 790 aa19.98■□□□□ 0.79
DDX55-207ENST00000540763 FUT11Q495W5 492 aa19.98■□□□□ 0.79
DDX55-207ENST00000540763 TMEM215Q68D42 235 aa19.98■□□□□ 0.79
DDX55-207ENST00000540763 SYT13Q7L8C5 426 aa19.98■□□□□ 0.79
DDX55-207ENST00000540763 POLNQ7Z5Q5 900 aa19.98■□□□□ 0.79
DDX55-207ENST00000540763 KIAA1328Q86T90 577 aa19.98■□□□□ 0.79
DDX55-207ENST00000540763 NLRP14Q86W24 1093 aa19.98■□□□□ 0.79
DDX55-207ENST00000540763 C1orf210Q8IVY1 113 aa19.98■□□□□ 0.79
DDX55-207ENST00000540763 PYROXD2Q8N2H3 581 aa19.98■□□□□ 0.79
DDX55-207ENST00000540763 IL17RCQ8NAC3 791 aa19.98■□□□□ 0.79
DDX55-207ENST00000540763 ATOH1Q92858 354 aaPredicted RBP19.98■□□□□ 0.79
DDX55-207ENST00000540763 TTC17Q96AE7 1141 aa19.98■□□□□ 0.79
DDX55-207ENST00000540763 DHX35Q9H5Z1 703 aaKnown RBP19.98■□□□□ 0.79
DDX55-207ENST00000540763 CATSPERBQ9H7T0 1116 aa19.98■□□□□ 0.79
DDX55-207ENST00000540763 SPATA6Q9NWH7 488 aaPredicted RBP19.98■□□□□ 0.79
DDX55-207ENST00000540763 MPP6Q9NZW5 540 aa19.98■□□□□ 0.79
DDX55-207ENST00000540763 MMP17Q9ULZ9 603 aa19.98■□□□□ 0.79
DDX55-207ENST00000540763 ILVBLA1L0T0 632 aa19.97■□□□□ 0.79
DDX55-207ENST00000540763 RHOCP08134 193 aa19.97■□□□□ 0.79
DDX55-207ENST00000540763 KRT7P08729 469 aa19.97■□□□□ 0.79
DDX55-207ENST00000540763 POLR2EP19388 210 aaKnown RBP19.97■□□□□ 0.79
DDX55-207ENST00000540763 EPHB2P29323 1055 aa19.97■□□□□ 0.79
DDX55-207ENST00000540763 OR1E1P30953 314 aa19.97■□□□□ 0.79
DDX55-207ENST00000540763 TIE1P35590 1138 aa19.97■□□□□ 0.79
DDX55-207ENST00000540763 ETFBP38117 255 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms