RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 FOXO6A8MYZ6 492 aa3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 TBC1D3LB9A6J9 549 aa3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 FFAR2O15552 330 aa3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 SMAD6O43541 496 aaKnown RBP3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 NEURL1O76050 574 aa3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 TBC1D3HP0C7X1 549 aa3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 PDIA3P30101 505 aaKnown RBP3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 HOXA11P31270 313 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 CCKARP32238 428 aa3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 POLD2P49005 469 aa3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 RBM6P78332 1123 aaKnown RBP3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 ZBTB16Q05516 673 aa3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 TBC1D3GQ6DHY5 549 aa3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 ISM2Q6H9L7 571 aa3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 TBC1D3CQ6IPX1 549 aa3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 CYB5R4Q7L1T6 521 aa3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 MEPCEQ7L2J0 689 aaKnown RBP3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 MORC1Q86VD1 984 aa3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 TBC1D3Q8IZP1 549 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 ACRBPQ8NEB7 543 aa3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 HMGB4Q8WW32 186 aa3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 INPP5DQ92835 1189 aa3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 ZNF419Q96HQ0 510 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 KRTAP1-5Q9BYS1 174 aa3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 FRMD8Q9BZ67 464 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 MAGEH1Q9H213 219 aa3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 MAP6D1Q9H9H5 199 aa3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 CYP3A7-CYP3A51PA0A087WV96 503 aa3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 GOLGA6L3A6NEY3 463 aa3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 C3orf70A6NLC5 250 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 MSI1O43347 362 aaKnown RBP3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 HEXIM1O94992 359 aaKnown RBP3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 CYP3A7P24462 503 aa3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 ARRB2P32121 409 aa3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 CDKN2AP42771 156 aaKnown RBP3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 PNLIPRP1P54315 467 aa3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 GALNT3Q14435 633 aa3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 PFKFB4Q16877 469 aa3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 ENTPD8Q5MY95 495 aa3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 C10orf76Q5T2E6 689 aa3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 CCDC146Q8IYE0 955 aa3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 ATG16L2Q8NAA4 619 aa3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 ZNF527Q8NB42 609 aa3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 ADPRHL1Q8NDY3 354 aa3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 SCAMP5Q8TAC9 235 aa3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 MARK4Q96L34 752 aa3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 CRB3Q9BUF7 120 aa3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 TMEM120AQ9BXJ8 343 aa3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 WDR12Q9GZL7 423 aaKnown RBP3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 ZNF304Q9HCX3 659 aa3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 FZD3Q9NPG1 666 aa3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 DAPP1Q9UN19 280 aa3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 RCE1Q9Y256 329 aa3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 LRP12Q9Y561 859 aa3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 INSL5Q9Y5Q6 135 aa3.8□□□□□ -1.8
HMGB1P29-201ENST00000505659 FAM90A8PA6NJQ4 464 aa3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 MCIDASD6RGH6 385 aa3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 GTPBP1O00178 669 aaKnown RBP3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 TNFRSF13BO14836 293 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 CYP21A2P08686 494 aa3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 FAM90A13PP0C7W8 464 aa3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 FAM90A24PP0C7X0 464 aa3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 PLA2G2AP14555 144 aa3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 CCKBRP32239 447 aa3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 BTKQ06187 659 aa3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 PMPCAQ10713 525 aa3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 PTK2BQ14289 1009 aa3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 TRIM60Q495X7 471 aa3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 ZNF569Q5MCW4 686 aa3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 TMEM88Q6PEY1 159 aa3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 CRELD2Q6UXH1 353 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 TRAPPC11Q7Z392 1133 aa3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 CTU1Q7Z7A3 348 aaKnown RBP3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 TMEM217Q8N7C4 229 aa3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 B4GALNT2Q8NHY0 566 aa3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 FAM110DQ8TAY7 271 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 WASF1Q92558 559 aa3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 CLMNQ96JQ2 1002 aa3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 RTKNQ9BST9 563 aa3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 KATNAL1Q9BW62 490 aa3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 HDHD5Q9BXW7 423 aa3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 ARHGAP39Q9C0H5 1083 aa3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 HIPK2Q9H2X6 1198 aa3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 NFU1Q9UMS0 254 aa3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 PCDHA10Q9Y5I2 948 aa3.79□□□□□ -1.8
HMGB1P29-201ENST00000505659 ABHD14A-ACY1A0A1B0GW23 586 aa3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 TCRBV7S3A2A0A539 114 aa3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 ACKR2O00590 384 aa3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 MDM4O15151 490 aa3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 SETSIPP0DME0 302 aa3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 HOXB6P17509 224 aaKnown RBP3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 RCAN1P53805 252 aa3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 ADPRHP54922 357 aa3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 TNFAIP2Q03169 654 aa3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 SEMA3AQ14563 771 aa3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 PUM3Q15397 648 aaKnown RBP3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 ZACNQ401N2 412 aa3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 GALNTL6Q49A17 601 aa3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 TTC39AQ5SRH9 613 aa3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 KIAA1161Q6NSJ0 714 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms