RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 CPXM2Q8N436 756 aa13.73□□□□□ -0.21
PRDM2-213ENST00000503842 PLD5Q8N7P1 536 aa13.73□□□□□ -0.21
PRDM2-213ENST00000503842 MAIP1Q8WWC4 291 aa13.73□□□□□ -0.21
PRDM2-213ENST00000503842 IGSF8Q969P0 613 aa13.73□□□□□ -0.21
PRDM2-213ENST00000503842 PRICKLE1Q96MT3 831 aaPredicted RBP13.73□□□□□ -0.21
PRDM2-213ENST00000503842 LRRC3BQ96PB8 259 aa13.73□□□□□ -0.21
PRDM2-213ENST00000503842 MAK16Q9BXY0 300 aaKnown RBP13.73□□□□□ -0.21
PRDM2-213ENST00000503842 ETNK2Q9NVF9 386 aa13.73□□□□□ -0.21
PRDM2-213ENST00000503842 ZNF212Q9UDV6 495 aa13.73□□□□□ -0.21
PRDM2-213ENST00000503842 NR2E1Q9Y466 385 aa13.73□□□□□ -0.21
PRDM2-213ENST00000503842 ZFP37Q9Y6Q3 630 aaPredicted RBP13.73□□□□□ -0.21
PRDM2-213ENST00000503842 ZFXP17010 805 aaPredicted RBP13.72□□□□□ -0.21
PRDM2-213ENST00000503842 RHOQP17081 205 aa13.72□□□□□ -0.21
PRDM2-213ENST00000503842 TGM2P21980 687 aa13.72□□□□□ -0.21
PRDM2-213ENST00000503842 KCNA5P22460 613 aa13.72□□□□□ -0.21
PRDM2-213ENST00000503842 VIPR2P41587 438 aa13.72□□□□□ -0.21
PRDM2-213ENST00000503842 IRAK1P51617 712 aa13.72□□□□□ -0.21
PRDM2-213ENST00000503842 PAFAH1B3Q15102 231 aaKnown RBP13.72□□□□□ -0.21
PRDM2-213ENST00000503842 NCBP2-AS2Q69YL0 99 aa13.72□□□□□ -0.21
PRDM2-213ENST00000503842 RWDD4Q6NW29 188 aaKnown RBP13.72□□□□□ -0.21
PRDM2-213ENST00000503842 ADAT2Q7Z6V5 191 aaKnown RBP13.72□□□□□ -0.21
PRDM2-213ENST00000503842 PRELID2Q8N945 189 aa13.72□□□□□ -0.21
PRDM2-213ENST00000503842 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.72□□□□□ -0.21
PRDM2-213ENST00000503842 RPRD1AQ96P16 312 aaPredicted RBP13.72□□□□□ -0.21
PRDM2-213ENST00000503842 ZYG11BQ9C0D3 744 aa13.72□□□□□ -0.21
PRDM2-213ENST00000503842 CATSPERBQ9H7T0 1116 aa13.72□□□□□ -0.21
PRDM2-213ENST00000503842 STIM2Q9P246 746 aa13.72□□□□□ -0.21
PRDM2-213ENST00000503842 R3HDM2Q9Y2K5 976 aaKnown RBP13.72□□□□□ -0.21
PRDM2-213ENST00000503842 MFHAS1Q9Y4C4 1052 aa13.72□□□□□ -0.21
PRDM2-213ENST00000503842 HEPACAM2A8MVW5 462 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 APOC4-APOC2K7ER74 178 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 KRIT1O00522 736 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 TRDMT1O14717 391 aaKnown RBP13.71□□□□□ -0.21
PRDM2-213ENST00000503842 DAPK3O43293 454 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 MBTPS2O43462 519 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 CNTN5O94779 1100 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 APOC2P02655 101 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 LAMP2P13473 410 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 PECAM1P16284 738 aaPredicted RBP13.71□□□□□ -0.21
PRDM2-213ENST00000503842 GBP2P32456 591 aaPredicted RBP13.71□□□□□ -0.21
PRDM2-213ENST00000503842 SGSHP51688 502 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 DYNLT1P63172 113 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 SKIV2LQ15477 1246 aaKnown RBP13.71□□□□□ -0.21
PRDM2-213ENST00000503842 CYP1B1Q16678 543 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 ALFQ53S48 1182 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 RABGAP1LQ5R372 815 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 CEP112Q8N8E3 955 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 RTL3Q8N8U3 475 aaKnown RBP13.71□□□□□ -0.21
PRDM2-213ENST00000503842 C12orf50Q8NA57 414 aaPredicted RBP13.71□□□□□ -0.21
PRDM2-213ENST00000503842 TTC16Q8NEE8 873 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 MNS1Q8NEH6 495 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 SPATA4Q8NEY3 305 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 BPIFB1Q8TDL5 484 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 E2F7Q96AV8 911 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 OTUB2Q96DC9 234 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 P2RY11Q96G91 374 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 CARD6Q9BX69 1037 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 AP1M1Q9BXS5 423 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 KLC2Q9H0B6 622 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 RETREG1Q9H6L5 497 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 TMEM248Q9NWD8 314 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 MPP6Q9NZW5 540 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 TBC1D14Q9P2M4 693 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 EPS15L1Q9UBC2 864 aa13.71□□□□□ -0.21
PRDM2-213ENST00000503842 KIF26AQ9ULI4 1882 aaPredicted RBP13.71□□□□□ -0.21
PRDM2-213ENST00000503842 GOLGA6L10A0A0M3HER8 536 aa13.7□□□□□ -0.22
PRDM2-213ENST00000503842 SLC9A3R1O14745 358 aaPredicted RBP13.7□□□□□ -0.22
PRDM2-213ENST00000503842 MFSD11O43934 449 aa13.7□□□□□ -0.22
PRDM2-213ENST00000503842 TSPAN3O60637 253 aa13.7□□□□□ -0.22
PRDM2-213ENST00000503842 CHKAP35790 457 aa13.7□□□□□ -0.22
PRDM2-213ENST00000503842 VCPP55072 806 aaKnown RBP13.7□□□□□ -0.22
PRDM2-213ENST00000503842 RPS24P62847 133 aaKnown RBP13.7□□□□□ -0.22
PRDM2-213ENST00000503842 OTUD4Q01804 1114 aaKnown RBP13.7□□□□□ -0.22
PRDM2-213ENST00000503842 GBE1Q04446 702 aa13.7□□□□□ -0.22
PRDM2-213ENST00000503842 NOMO1Q15155 1222 aa13.7□□□□□ -0.22
PRDM2-213ENST00000503842 TTC39BQ5VTQ0 682 aaPredicted RBP13.7□□□□□ -0.22
PRDM2-213ENST00000503842 AFMIDQ63HM1 303 aa13.7□□□□□ -0.22
PRDM2-213ENST00000503842 RNF43Q68DV7 783 aa13.7□□□□□ -0.22
PRDM2-213ENST00000503842 TANGO2Q6ICL3 276 aa13.7□□□□□ -0.22
PRDM2-213ENST00000503842 C1orf228Q6PIY5 440 aa13.7□□□□□ -0.22
PRDM2-213ENST00000503842 TMCO3Q6UWJ1 677 aa13.7□□□□□ -0.22
PRDM2-213ENST00000503842 NPNTQ6UXI9 565 aa13.7□□□□□ -0.22
PRDM2-213ENST00000503842 CHST9Q7L1S5 443 aa13.7□□□□□ -0.22
PRDM2-213ENST00000503842 OTOP3Q7RTS5 596 aa13.7□□□□□ -0.22
PRDM2-213ENST00000503842 CIR1Q86X95 450 aaPredicted RBP13.7□□□□□ -0.22
PRDM2-213ENST00000503842 NPWQ8N729 165 aa13.7□□□□□ -0.22
PRDM2-213ENST00000503842 TDRD5Q8NAT2 981 aaKnown RBP13.7□□□□□ -0.22
PRDM2-213ENST00000503842 HJURPQ8NCD3 748 aaPredicted RBP13.7□□□□□ -0.22
PRDM2-213ENST00000503842 ACTL9Q8TC94 416 aa13.7□□□□□ -0.22
PRDM2-213ENST00000503842 PPM1EQ8WY54 764 aa13.7□□□□□ -0.22
PRDM2-213ENST00000503842 HLA-CQ95604 372 aa13.7□□□□□ -0.22
PRDM2-213ENST00000503842 FRMD8P1Q9BZ68 369 aaPredicted RBP13.7□□□□□ -0.22
PRDM2-213ENST00000503842 LINC00597Q9H2U6 94 aa13.7□□□□□ -0.22
PRDM2-213ENST00000503842 ZFP14Q9HCL3 533 aa13.7□□□□□ -0.22
PRDM2-213ENST00000503842 RBM12Q9NTZ6 932 aaKnown RBP13.7□□□□□ -0.22
PRDM2-213ENST00000503842 NUP205Q92621 2012 aa13.69□□□□□ -0.22
PRDM2-213ENST00000503842 A0A1B0GVM2 712 aa13.69□□□□□ -0.22
PRDM2-213ENST00000503842 CTAGE15A4D2H0 777 aa13.69□□□□□ -0.22
PRDM2-213ENST00000503842 TCAF2A6NFQ2 919 aa13.69□□□□□ -0.22
PRDM2-213ENST00000503842 CCDC188H7C350 402 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms