RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 CRY1Q16526 586 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 FUT11Q495W5 492 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 EFHC2Q5JST6 749 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 EOGTQ5NDL2 527 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 DAB2IPQ5VWQ8 1189 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 MBLAC2Q68D91 279 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 CXorf57Q6NSI4 855 aaKnown RBP13.95□□□□□ -0.18
COL1A1-208ENST00000494334 TRMT11Q7Z4G4 463 aaKnown RBP13.95□□□□□ -0.18
COL1A1-208ENST00000494334 CHPFQ8IZ52 775 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 OR52K2Q8NGK3 314 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 SORCS1Q8WY21 1168 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 PEBP4Q96S96 227 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 ZYG11BQ9C0D3 744 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 OSGEPQ9NPF4 335 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 THAP10Q9P2Z0 257 aaPredicted RBP13.95□□□□□ -0.18
COL1A1-208ENST00000494334 PPARGC1AQ9UBK2 798 aaKnown RBP13.95□□□□□ -0.18
COL1A1-208ENST00000494334 IP6K2Q9UHH9 426 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 INTUQ9ULD6 942 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 SLC8A2Q9UPR5 921 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 TBC1D30Q9Y2I9 924 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 ATG2BQ96BY7 2078 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 CACNA1IQ9P0X4 2223 aa13.95□□□□□ -0.18
COL1A1-208ENST00000494334 GOLGA6L3A6NEY3 463 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 WASH3PC4AMC7 463 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 POLR2EP19388 210 aaKnown RBP13.94□□□□□ -0.18
COL1A1-208ENST00000494334 MZF1P28698 734 aaPredicted RBP13.94□□□□□ -0.18
COL1A1-208ENST00000494334 NTSR1P30989 418 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 L1CAMP32004 1257 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 CSKP41240 450 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 WASP42768 502 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 MAGEA1P43355 309 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 SLC12A1Q13621 1099 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 ZNF234Q14588 700 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 PLEKHG6Q3KR16 790 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 ZNF528Q3MIS6 628 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 PITRM1Q5JRX3 1037 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 ERMARDQ5T6L9 678 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 TMEM92Q6UXU6 159 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 RAD9BQ6WBX8 426 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 CYP4V2Q6ZWL3 525 aaPredicted RBP13.94□□□□□ -0.18
COL1A1-208ENST00000494334 TMEM139Q8IV31 216 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 APCDD1Q8J025 514 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 NIPA2Q8N8Q9 360 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 SLC35G2Q8TBE7 412 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 CYB5D2Q8WUJ1 264 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 NELL1Q92832 810 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 TTC17Q96AE7 1141 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 ALG14Q96F25 216 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 GABRG3Q99928 467 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 BAG1Q99933 345 aaPredicted RBP13.94□□□□□ -0.18
COL1A1-208ENST00000494334 NCAPGQ9BPX3 1015 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 GRPEL1Q9HAV7 217 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 GPATCH2LQ9NWQ4 482 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 CACNA2D2Q9NY47 1150 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 ZNF212Q9UDV6 495 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 USP18Q9UMW8 372 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 NEU3Q9UQ49 428 aa13.94□□□□□ -0.18
COL1A1-208ENST00000494334 EPN1Q9Y6I3 576 aaPredicted RBP13.94□□□□□ -0.18
COL1A1-208ENST00000494334 EIF3CLB5ME19 914 aaKnown RBP13.93□□□□□ -0.18
COL1A1-208ENST00000494334 NPC1O15118 1278 aa13.93□□□□□ -0.18
COL1A1-208ENST00000494334 PRPSAP2O60256 369 aa13.93□□□□□ -0.18
COL1A1-208ENST00000494334 NDUFA10O95299 355 aa13.93□□□□□ -0.18
COL1A1-208ENST00000494334 MOCS3O95396 460 aa13.93□□□□□ -0.18
COL1A1-208ENST00000494334 ATP5BP06576 529 aaKnown RBP13.93□□□□□ -0.18
COL1A1-208ENST00000494334 DLDP09622 509 aaKnown RBP13.93□□□□□ -0.18
COL1A1-208ENST00000494334 TCF4P15884 667 aa13.93□□□□□ -0.18
COL1A1-208ENST00000494334 IL1R2P27930 398 aa13.93□□□□□ -0.18
COL1A1-208ENST00000494334 IL12RB1P42701 662 aa13.93□□□□□ -0.18
COL1A1-208ENST00000494334 NUMBP49757 651 aa13.93□□□□□ -0.18
COL1A1-208ENST00000494334 PLK1P53350 603 aa13.93□□□□□ -0.18
COL1A1-208ENST00000494334 OXCT1P55809 520 aa13.93□□□□□ -0.18
COL1A1-208ENST00000494334 DMWDQ09019 674 aa13.93□□□□□ -0.18
COL1A1-208ENST00000494334 SEMA3BQ13214 749 aa13.93□□□□□ -0.18
COL1A1-208ENST00000494334 ENPP2Q13822 863 aa13.93□□□□□ -0.18
COL1A1-208ENST00000494334 CA9Q16790 459 aa13.93□□□□□ -0.18
COL1A1-208ENST00000494334 PTPRNQ16849 979 aa13.93□□□□□ -0.18
COL1A1-208ENST00000494334 SDE2Q6IQ49 451 aa13.93□□□□□ -0.18
COL1A1-208ENST00000494334 RWDD4Q6NW29 188 aaKnown RBP13.93□□□□□ -0.18
COL1A1-208ENST00000494334 TFAP2DQ7Z6R9 452 aa13.93□□□□□ -0.18
COL1A1-208ENST00000494334 SETD3Q86TU7 594 aaPredicted RBP13.93□□□□□ -0.18
COL1A1-208ENST00000494334 NLRP14Q86W24 1093 aa13.93□□□□□ -0.18
COL1A1-208ENST00000494334 CAMKK1Q8N5S9 505 aa13.93□□□□□ -0.18
COL1A1-208ENST00000494334 TBC1D31Q96DN5 1066 aa13.93□□□□□ -0.18
COL1A1-208ENST00000494334 HHIPQ96QV1 700 aa13.93□□□□□ -0.18
COL1A1-208ENST00000494334 EIF3CQ99613 913 aaKnown RBP13.93□□□□□ -0.18
COL1A1-208ENST00000494334 SNRNP25Q9BV90 132 aaKnown RBP13.93□□□□□ -0.18
COL1A1-208ENST00000494334 IRF2BPLQ9H1B7 796 aa13.93□□□□□ -0.18
COL1A1-208ENST00000494334 AP4E1Q9UPM8 1137 aa13.93□□□□□ -0.18
COL1A1-208ENST00000494334 ARIH1Q9Y4X5 557 aaPredicted RBP13.93□□□□□ -0.18
COL1A1-208ENST00000494334 PCDHA13Q9Y5I0 950 aa13.93□□□□□ -0.18
COL1A1-208ENST00000494334 OR51B4Q9Y5P0 310 aa13.93□□□□□ -0.18
COL1A1-208ENST00000494334 STON1Q9Y6Q2 735 aa13.93□□□□□ -0.18
COL1A1-208ENST00000494334 A0A1W2PQF6 199 aa13.92□□□□□ -0.18
COL1A1-208ENST00000494334 GOLGA6L6A8MZA4 724 aa13.92□□□□□ -0.18
COL1A1-208ENST00000494334 CREB3O43889 395 aa13.92□□□□□ -0.18
COL1A1-208ENST00000494334 PROSCO94903 275 aa13.92□□□□□ -0.18
COL1A1-208ENST00000494334 RHOCP08134 193 aa13.92□□□□□ -0.18
COL1A1-208ENST00000494334 HOXB2P14652 356 aa13.92□□□□□ -0.18
COL1A1-208ENST00000494334 RHOQP17081 205 aa13.92□□□□□ -0.18
COL1A1-208ENST00000494334 OR1E1P30953 314 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms