RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 RABGAP1LQ5R372 815 aa20.02■□□□□ 0.8
USP40-207ENST00000450940 FKBP15Q5T1M5 1219 aa20.02■□□□□ 0.8
USP40-207ENST00000450940 TAF3Q5VWG9 929 aa20.02■□□□□ 0.8
USP40-207ENST00000450940 ARCQ7LC44 396 aa20.02■□□□□ 0.8
USP40-207ENST00000450940 RNF34Q969K3 372 aa20.02■□□□□ 0.8
USP40-207ENST00000450940 PIGVQ9NUD9 493 aa20.02■□□□□ 0.8
USP40-207ENST00000450940 ARHGEF38Q9NXL2 777 aa20.02■□□□□ 0.8
USP40-207ENST00000450940 PCNX2A6NKB5 2137 aa20.02■□□□□ 0.79
USP40-207ENST00000450940 SYNJ2BP-COX16A0A087WUM0 186 aa20.01■□□□□ 0.79
USP40-207ENST00000450940 TARSL2A2RTX5 802 aaKnown RBP20.01■□□□□ 0.79
USP40-207ENST00000450940 UPK3BL1B0FP48 263 aa20.01■□□□□ 0.79
USP40-207ENST00000450940 UPK3BL2E5RIL1 263 aa20.01■□□□□ 0.79
USP40-207ENST00000450940 EPHB6O15197 1021 aa20.01■□□□□ 0.79
USP40-207ENST00000450940 F9P00740 461 aa20.01■□□□□ 0.79
USP40-207ENST00000450940 MMEP08473 750 aa20.01■□□□□ 0.79
USP40-207ENST00000450940 CTSOP43234 321 aaPredicted RBP20.01■□□□□ 0.79
USP40-207ENST00000450940 VASPP50552 380 aaPredicted RBP20.01■□□□□ 0.79
USP40-207ENST00000450940 COPB1P53618 953 aaKnown RBP20.01■□□□□ 0.79
USP40-207ENST00000450940 OXCT1P55809 520 aa20.01■□□□□ 0.79
USP40-207ENST00000450940 NOMO3P69849 1222 aa20.01■□□□□ 0.79
USP40-207ENST00000450940 ECT2LQ008S8 904 aa20.01■□□□□ 0.79
USP40-207ENST00000450940 NME3Q13232 169 aa20.01■□□□□ 0.79
USP40-207ENST00000450940 NCAPHQ15003 741 aa20.01■□□□□ 0.79
USP40-207ENST00000450940 BRMS1LQ5PSV4 323 aa20.01■□□□□ 0.79
USP40-207ENST00000450940 CCDC183Q5T5S1 534 aa20.01■□□□□ 0.79
USP40-207ENST00000450940 N4BP2L1Q5TBK1 243 aaPredicted RBP20.01■□□□□ 0.79
USP40-207ENST00000450940 CXorf57Q6NSI4 855 aaKnown RBP20.01■□□□□ 0.79
USP40-207ENST00000450940 BNIPLQ7Z465 357 aa20.01■□□□□ 0.79
USP40-207ENST00000450940 RGL4Q8IZJ4 473 aa20.01■□□□□ 0.79
USP40-207ENST00000450940 APCDD1Q8J025 514 aa20.01■□□□□ 0.79
USP40-207ENST00000450940 IGSF8Q969P0 613 aa20.01■□□□□ 0.79
USP40-207ENST00000450940 ALG14Q96F25 216 aa20.01■□□□□ 0.79
USP40-207ENST00000450940 HSD3B7Q9H2F3 369 aa20.01■□□□□ 0.79
USP40-207ENST00000450940 COX16Q9P0S2 106 aa20.01■□□□□ 0.79
USP40-207ENST00000450940 TMEM59LQ9UK28 342 aa20.01■□□□□ 0.79
USP40-207ENST00000450940 STAP1Q9ULZ2 295 aa20.01■□□□□ 0.79
USP40-207ENST00000450940 SCML1Q9UN30 329 aa20.01■□□□□ 0.79
USP40-207ENST00000450940 HS3ST4Q9Y661 456 aa20.01■□□□□ 0.79
USP40-207ENST00000450940 ARHGAP33O14559 1287 aa20■□□□□ 0.79
USP40-207ENST00000450940 PAGE1O75459 146 aa20■□□□□ 0.79
USP40-207ENST00000450940 CYP1A1P04798 512 aaPredicted RBP20■□□□□ 0.79
USP40-207ENST00000450940 GNSP15586 552 aa20■□□□□ 0.79
USP40-207ENST00000450940 TFE3P19532 575 aaPredicted RBP20■□□□□ 0.79
USP40-207ENST00000450940 MAOBP27338 520 aa20■□□□□ 0.79
USP40-207ENST00000450940 SOX5P35711 763 aa20■□□□□ 0.79
USP40-207ENST00000450940 POLR2FP61218 127 aaKnown RBP20■□□□□ 0.79
USP40-207ENST00000450940 CDR2Q01850 454 aa20■□□□□ 0.79
USP40-207ENST00000450940 SLC25A52Q3SY17 297 aa20■□□□□ 0.79
USP40-207ENST00000450940 C9orf64Q5T6V5 341 aa20■□□□□ 0.79
USP40-207ENST00000450940 ZNF776Q68DI1 518 aaPredicted RBP20■□□□□ 0.79
USP40-207ENST00000450940 APTXQ7Z2E3 356 aaKnown RBP20■□□□□ 0.79
USP40-207ENST00000450940 MSANTD4Q8NCY6 345 aa20■□□□□ 0.79
USP40-207ENST00000450940 C1orf216Q8TAB5 229 aa20■□□□□ 0.79
USP40-207ENST00000450940 MTG2Q9H4K7 406 aa20■□□□□ 0.79
USP40-207ENST00000450940 FAM207AQ9NSI2 230 aaPredicted RBP20■□□□□ 0.79
USP40-207ENST00000450940 SLCO3A1Q9UIG8 710 aa20■□□□□ 0.79
USP40-207ENST00000450940 DOCK4Q8N1I0 1966 aa20■□□□□ 0.79
USP40-207ENST00000450940 A0A1B0GTW7 788 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 LGALS16A8MUM7 142 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 I6L893 689 aaPredicted RBP19.99■□□□□ 0.79
USP40-207ENST00000450940 SIN3BO75182 1162 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 GFPT2O94808 682 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 ADCY5O95622 1261 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 DNTTP04053 509 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 SYPP08247 313 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 CEACAM1P13688 526 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 CHRNB2P17787 502 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 ACSL1P33121 698 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 MAPK8P45983 427 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 RNASE9P60153 205 aaKnown RBP19.99■□□□□ 0.79
USP40-207ENST00000450940 SULT2A1Q06520 285 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 SEMA3BQ13214 749 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 ACBD5Q5T8D3 534 aaPredicted RBP19.99■□□□□ 0.79
USP40-207ENST00000450940 FAM102AQ5T9C2 384 aaPredicted RBP19.99■□□□□ 0.79
USP40-207ENST00000450940 DCAF12L1Q5VU92 463 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 USP30Q70CQ3 517 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 C14orf80Q86SX3 495 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 CIR1Q86X95 450 aaPredicted RBP19.99■□□□□ 0.79
USP40-207ENST00000450940 CACUL1Q86Y37 369 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 ZNF683Q8IZ20 524 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 ANKRD20A12PQ8NF67 263 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 SLC20A1Q8WUM9 679 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 CPA5Q8WXQ8 436 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 C1orf74Q96LT6 269 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 RPRD1AQ96P16 312 aaPredicted RBP19.99■□□□□ 0.79
USP40-207ENST00000450940 ERGIC2Q96RQ1 377 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 PPP1R9BQ96SB3 815 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 WDCPQ9H6R7 721 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 FSCN3Q9NQT6 498 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 ANLNQ9NQW6 1124 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 VANGL2Q9ULK5 521 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 TBC1D30Q9Y2I9 924 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 PAXBP1Q9Y5B6 917 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 OR51B4Q9Y5P0 310 aa19.99■□□□□ 0.79
USP40-207ENST00000450940 EDDM13A0A1B0GTR0 161 aa19.98■□□□□ 0.79
USP40-207ENST00000450940 MEI4A8MW99 385 aa19.98■□□□□ 0.79
USP40-207ENST00000450940 TTC34A8MYJ7 566 aa19.98■□□□□ 0.79
USP40-207ENST00000450940 CLDN11O75508 207 aa19.98■□□□□ 0.79
USP40-207ENST00000450940 MMP8P22894 467 aa19.98■□□□□ 0.79
USP40-207ENST00000450940 MZF1P28698 734 aaPredicted RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms