RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 CHST9Q7L1S5 443 aa20.19■□□□□ 0.82
CIRBP-220ENST00000588917 POLNQ7Z5Q5 900 aa20.19■□□□□ 0.82
CIRBP-220ENST00000588917 DAAM2Q86T65 1068 aa20.19■□□□□ 0.82
CIRBP-220ENST00000588917 ETFBKMTQ8IXQ9 262 aa20.19■□□□□ 0.82
CIRBP-220ENST00000588917 NAT16Q8N8M0 369 aa20.19■□□□□ 0.82
CIRBP-220ENST00000588917 FIBINQ8TAL6 211 aa20.19■□□□□ 0.82
CIRBP-220ENST00000588917 ZNF830Q96NB3 372 aaPredicted RBP20.19■□□□□ 0.82
CIRBP-220ENST00000588917 OSBPL6Q9BZF3 934 aa20.19■□□□□ 0.82
CIRBP-220ENST00000588917 ZYG11BQ9C0D3 744 aa20.19■□□□□ 0.82
CIRBP-220ENST00000588917 MFSD1Q9H3U5 465 aa20.19■□□□□ 0.82
CIRBP-220ENST00000588917 ZWILCHQ9H900 591 aa20.19■□□□□ 0.82
CIRBP-220ENST00000588917 TMPRSS4Q9NRS4 437 aa20.19■□□□□ 0.82
CIRBP-220ENST00000588917 PLK2Q9NYY3 685 aa20.19■□□□□ 0.82
CIRBP-220ENST00000588917 PPP2R2CQ9Y2T4 447 aa20.19■□□□□ 0.82
CIRBP-220ENST00000588917 KIF26AQ9ULI4 1882 aaPredicted RBP20.19■□□□□ 0.82
CIRBP-220ENST00000588917 A0A0A0MRY4 1105 aa20.18■□□□□ 0.82
CIRBP-220ENST00000588917 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.18■□□□□ 0.82
CIRBP-220ENST00000588917 A0A1B0GVM2 712 aa20.18■□□□□ 0.82
CIRBP-220ENST00000588917 KRBA1A5PL33 1030 aa20.18■□□□□ 0.82
CIRBP-220ENST00000588917 TCAF2A6NFQ2 919 aa20.18■□□□□ 0.82
CIRBP-220ENST00000588917 H0Y626 953 aa20.18■□□□□ 0.82
CIRBP-220ENST00000588917 BUB1O43683 1085 aa20.18■□□□□ 0.82
CIRBP-220ENST00000588917 SPOPO43791 374 aa20.18■□□□□ 0.82
CIRBP-220ENST00000588917 TULP3O75386 442 aa20.18■□□□□ 0.82
CIRBP-220ENST00000588917 HOXD9P28356 352 aaPredicted RBP20.18■□□□□ 0.82
CIRBP-220ENST00000588917 GRIA2P42262 883 aa20.18■□□□□ 0.82
CIRBP-220ENST00000588917 SOX9P48436 509 aa20.18■□□□□ 0.82
CIRBP-220ENST00000588917 RPS24P62847 133 aaKnown RBP20.18■□□□□ 0.82
CIRBP-220ENST00000588917 ZNF177Q13360 481 aaPredicted RBP20.18■□□□□ 0.82
CIRBP-220ENST00000588917 SLC12A1Q13621 1099 aa20.18■□□□□ 0.82
CIRBP-220ENST00000588917 GAB4Q2WGN9 574 aa20.18■□□□□ 0.82
CIRBP-220ENST00000588917 RNF43Q68DV7 783 aa20.18■□□□□ 0.82
CIRBP-220ENST00000588917 C14orf80Q86SX3 495 aa20.18■□□□□ 0.82
CIRBP-220ENST00000588917 MAP7D3Q8IWC1 876 aa20.18■□□□□ 0.82
CIRBP-220ENST00000588917 RHOT1Q8IXI2 618 aa20.18■□□□□ 0.82
CIRBP-220ENST00000588917 ZNF683Q8IZ20 524 aa20.18■□□□□ 0.82
CIRBP-220ENST00000588917 CFAP52Q8N1V2 620 aa20.18■□□□□ 0.82
CIRBP-220ENST00000588917 ATOH1Q92858 354 aaPredicted RBP20.18■□□□□ 0.82
CIRBP-220ENST00000588917 BHMTQ93088 406 aa20.18■□□□□ 0.82
CIRBP-220ENST00000588917 IGSF8Q969P0 613 aa20.18■□□□□ 0.82
CIRBP-220ENST00000588917 SNRNP25Q9BV90 132 aaKnown RBP20.18■□□□□ 0.82
CIRBP-220ENST00000588917 DHX35Q9H5Z1 703 aaKnown RBP20.18■□□□□ 0.82
CIRBP-220ENST00000588917 DNAJC17Q9NVM6 304 aaKnown RBP20.18■□□□□ 0.82
CIRBP-220ENST00000588917 SALL4Q9UJQ4 1053 aa20.18■□□□□ 0.82
CIRBP-220ENST00000588917 SLC27A6Q9Y2P4 619 aa20.18■□□□□ 0.82
CIRBP-220ENST00000588917 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.18■□□□□ 0.82
CIRBP-220ENST00000588917 MACROD2A1Z1Q3 448 aa20.17■□□□□ 0.82
CIRBP-220ENST00000588917 APODP05090 189 aa20.17■□□□□ 0.82
CIRBP-220ENST00000588917 RARAP10276 462 aa20.17■□□□□ 0.82
CIRBP-220ENST00000588917 COMTP21964 271 aa20.17■□□□□ 0.82
CIRBP-220ENST00000588917 OPRD1P41143 372 aa20.17■□□□□ 0.82
CIRBP-220ENST00000588917 SLC6A11P48066 632 aa20.17■□□□□ 0.82
CIRBP-220ENST00000588917 HCAR3P49019 387 aa20.17■□□□□ 0.82
CIRBP-220ENST00000588917 SLC25A11Q02978 314 aaKnown RBP20.17■□□□□ 0.82
CIRBP-220ENST00000588917 CDH18Q13634 790 aa20.17■□□□□ 0.82
CIRBP-220ENST00000588917 FBXO43Q4G163 708 aa20.17■□□□□ 0.82
CIRBP-220ENST00000588917 ODF2Q5BJF6 829 aa20.17■□□□□ 0.82
CIRBP-220ENST00000588917 TMEM196Q5HYL7 178 aa20.17■□□□□ 0.82
CIRBP-220ENST00000588917 DGKKQ5KSL6 1271 aa20.17■□□□□ 0.82
CIRBP-220ENST00000588917 GRAMD4Q6IC98 578 aa20.17■□□□□ 0.82
CIRBP-220ENST00000588917 MFN1Q8IWA4 741 aa20.17■□□□□ 0.82
CIRBP-220ENST00000588917 CARNMT1Q8N4J0 409 aa20.17■□□□□ 0.82
CIRBP-220ENST00000588917 TBC1D31Q96DN5 1066 aa20.17■□□□□ 0.82
CIRBP-220ENST00000588917 PRICKLE1Q96MT3 831 aaPredicted RBP20.17■□□□□ 0.82
CIRBP-220ENST00000588917 PEBP4Q96S96 227 aa20.17■□□□□ 0.82
CIRBP-220ENST00000588917 KCNF1Q9H3M0 494 aa20.17■□□□□ 0.82
CIRBP-220ENST00000588917 CATSPERBQ9H7T0 1116 aa20.17■□□□□ 0.82
CIRBP-220ENST00000588917 ARHGEF4Q9NR80 690 aa20.17■□□□□ 0.82
CIRBP-220ENST00000588917 DDX56Q9NY93 547 aaKnown RBP20.17■□□□□ 0.82
CIRBP-220ENST00000588917 KIAA1522Q9P206 1035 aaPredicted RBP20.17■□□□□ 0.82
CIRBP-220ENST00000588917 GUCA1BQ9UMX6 200 aa20.17■□□□□ 0.82
CIRBP-220ENST00000588917 FGF10O15520 208 aaPredicted RBP20.16■□□□□ 0.82
CIRBP-220ENST00000588917 DAPK3O43293 454 aa20.16■□□□□ 0.82
CIRBP-220ENST00000588917 TIMM44O43615 452 aa20.16■□□□□ 0.82
CIRBP-220ENST00000588917 CREB3O43889 395 aa20.16■□□□□ 0.82
CIRBP-220ENST00000588917 LRIG2O94898 1065 aa20.16■□□□□ 0.82
CIRBP-220ENST00000588917 LUC7L3O95232 432 aaKnown RBP20.16■□□□□ 0.82
CIRBP-220ENST00000588917 RHOQP17081 205 aa20.16■□□□□ 0.82
CIRBP-220ENST00000588917 IL1R2P27930 398 aa20.16■□□□□ 0.82
CIRBP-220ENST00000588917 ARL4AP40617 200 aa20.16■□□□□ 0.82
CIRBP-220ENST00000588917 TNFRSF4P43489 277 aa20.16■□□□□ 0.82
CIRBP-220ENST00000588917 PDK2Q15119 407 aa20.16■□□□□ 0.82
CIRBP-220ENST00000588917 PON2Q15165 354 aa20.16■□□□□ 0.82
CIRBP-220ENST00000588917 DPYSL2Q16555 572 aa20.16■□□□□ 0.82
CIRBP-220ENST00000588917 KCNT1Q5JUK3 1230 aa20.16■□□□□ 0.82
CIRBP-220ENST00000588917 ZFYVE27Q5T4F4 411 aa20.16■□□□□ 0.82
CIRBP-220ENST00000588917 MANEALQ5VSG8 457 aa20.16■□□□□ 0.82
CIRBP-220ENST00000588917 RWDD4Q6NW29 188 aaKnown RBP20.16■□□□□ 0.82
CIRBP-220ENST00000588917 SETD3Q86TU7 594 aaPredicted RBP20.16■□□□□ 0.82
CIRBP-220ENST00000588917 CCAR2Q8N163 923 aaKnown RBP20.16■□□□□ 0.82
CIRBP-220ENST00000588917 SYNPOQ8N3V7 929 aa20.16■□□□□ 0.82
CIRBP-220ENST00000588917 KCTD6Q8NC69 237 aa20.16■□□□□ 0.82
CIRBP-220ENST00000588917 HSPH1Q92598 858 aa20.16■□□□□ 0.82
CIRBP-220ENST00000588917 CHFRQ96EP1 664 aa20.16■□□□□ 0.82
CIRBP-220ENST00000588917 FAM86C1Q9NVL1 165 aa20.16■□□□□ 0.82
CIRBP-220ENST00000588917 SNX10Q9Y5X0 201 aa20.16■□□□□ 0.82
CIRBP-220ENST00000588917 ZFHX2Q9C0A1 2572 aaPredicted RBP20.16■□□□□ 0.82
CIRBP-220ENST00000588917 USP34Q70CQ2 3546 aa20.15■□□□□ 0.82
CIRBP-220ENST00000588917 TBC1D3BA6NDS4 549 aa20.15■□□□□ 0.82
CIRBP-220ENST00000588917 GALR2O43603 387 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms