RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 MIER2Q8N344 545 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 TCAIMQ8N3R3 496 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 ZNF321PQ8N8H1 164 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 OR13C2Q8NGS9 318 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 ATL1Q8WXF7 558 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 LRTOMTQ8WZ04 291 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 STAMQ92783 540 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 GAL3ST3Q96A11 431 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 ZUFSPQ96AP4 578 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 ATG4CQ96DT6 458 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 PDLIM5Q96HC4 596 aaKnown RBP4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 RBM41Q96IZ5 413 aaKnown RBP4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 ADAD1Q96M93 576 aaKnown RBP4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 USP28Q96RU2 1077 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 KCNK16Q96T55 309 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 MXD3Q9BW11 206 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 SHCBP1LQ9BZQ2 653 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 TFB2MQ9H5Q4 396 aaKnown RBP4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 ZCCHC4Q9H5U6 513 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 LRRC40Q9H9A6 602 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 MRPL44Q9H9J2 332 aaKnown RBP4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 SPACA1Q9HBV2 294 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 TUFT1Q9NNX1 390 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 C19orf73Q9NVV2 129 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 FAM120CQ9NX05 1096 aaKnown RBP4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 NINJ2Q9NZG7 142 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 IL37Q9NZH6 218 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 VPS54Q9P1Q0 977 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 LRP2BPQ9P2M1 347 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 COPG2Q9UBF2 871 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 ATP6V1HQ9UI12 483 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 SERPINB13Q9UIV8 391 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 CPSF3Q9UKF6 684 aaKnown RBP4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 ZNF214Q9UL59 606 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 VANGL2Q9ULK5 521 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 SLC8A2Q9UPR5 921 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 GAB2Q9UQC2 676 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 CHKBQ9Y259 395 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 NUDCQ9Y266 331 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 STON1Q9Y6Q2 735 aa4.66□□□□□ -1.66
HMGB3P26-201ENST00000560051 LOC100506127A0A0U1RQW1 187 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 PRAMEF27A3QJZ7 478 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 H7BY64 318 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 SYT5O00445 386 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 ZNF263O14978 683 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 DLX3O60479 287 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 ACSL4O60488 711 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 LRRN2O75325 713 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 ATP5HO75947 161 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 DDNO94850 711 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 MYL4P12829 197 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 GJA1P17302 382 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 CTRB1P17538 263 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 MLH1P40692 756 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 IL15P40933 162 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 KIR3DL1P43629 444 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 CEBPAP49715 358 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 BMXP51813 675 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 ZNF143P52747 638 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 HK2P52789 917 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 ATXN3P54252 364 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 ETF1P62495 437 aaKnown RBP4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 YPEL5P62699 121 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 ATP8B2P98198 1209 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 GUCY1B3Q02153 619 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 TAP2Q03519 686 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 UBE3AQ05086 875 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 RING1Q06587 406 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 SCN1BQ07699 218 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 ZNF543Q08ER8 600 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 TEFQ10587 303 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 PLD1Q13393 1074 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 THOC5Q13769 683 aaKnown RBP4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 DDX39BQ13838 428 aaKnown RBP4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 TRIM25Q14258 630 aaKnown RBP4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 NONOQ15233 471 aaKnown RBP eCLIP4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 UBE3CQ15386 1083 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 CNN3Q15417 329 aaKnown RBP4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 NTRK3Q16288 839 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 TSTQ16762 297 aaKnown RBP4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 UGP2Q16851 508 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 PABPC1LQ4VXU2 614 aaKnown RBP4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 FAM76BQ5HYJ3 339 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 BEND6Q5SZJ8 279 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 GRTP1Q5TC63 336 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 AFMIDQ63HM1 303 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 CTRB2Q6GPI1 263 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 KRT80Q6KB66 452 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 FAM173BQ6P4H8 233 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 MACC1Q6ZN28 852 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 FAM83HQ6ZRV2 1179 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 STXBP4Q6ZWJ1 553 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 CHST3Q7LGC8 479 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 TMPRSS7Q7RTY8 843 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 SLC51BQ86UW2 128 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 MAPKAPK5Q8IW41 473 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 SCN4BQ8IWT1 228 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 TUSC5Q8IXB3 177 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 PHC2Q8IXK0 858 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 CARFQ8N187 725 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms