RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 COMMD8Q9NX08 183 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 PTGFRNQ9P2B2 879 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 TUBGCP4Q9UGJ1 667 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 NFS1Q9Y697 457 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 MAP3K5Q99683 1374 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 RFXAPO00287 272 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 CYP11B2P19099 503 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 GRIA3P42263 894 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 ZNF135P52742 658 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-248ENST00000558190 ARF3P61204 181 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-248ENST00000558190 ARF1P84077 181 aaKnown RBP3.77□□□□□ -1.81
ATXN3-248ENST00000558190 NAB1Q13506 487 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 DHDDSQ86SQ9 333 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 CDH19Q9H159 772 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 CLCA2Q9UQC9 943 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 H7C2Y5 167 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 TK2O00142 265 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 PIGNO95427 931 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 ATP13A5Q4VNC0 1218 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 ZCCHC23Q6ZST2 131 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 SLC25A23Q9BV35 468 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 KIFC1Q9BW19 673 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 NTN4Q9HB63 628 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 FBXO6Q9NRD1 293 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-248ENST00000558190 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.76□□□□□ -1.81
ATXN3-248ENST00000558190 IFI30P13284 250 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 STYK1Q6J9G0 422 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 LRRC19Q9H756 370 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 CCDC177Q9NQR7 707 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-248ENST00000558190 SLC30A1Q9Y6M5 507 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 UTYO14607 1347 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 PFASO15067 1338 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 KDM3AQ9Y4C1 1321 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 BCLAF3A2AJT9 711 aaKnown RBP3.76□□□□□ -1.81
ATXN3-248ENST00000558190 TOMM70O94826 608 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 OR6B1O95007 311 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 ASS1P00966 412 aaKnown RBP3.76□□□□□ -1.81
ATXN3-248ENST00000558190 FOSL1P15407 271 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 PTK6Q13882 451 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 NT5DC1Q5TFE4 455 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 GPAT2Q6NUI2 795 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 C11orf88Q6PI97 169 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 PSD4Q8NDX1 1056 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 ETNPPLQ8TBG4 499 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 LRRN4Q8WUT4 740 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 DUSP12Q9UNI6 340 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 ZSCAN5BA6NJL1 495 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 H3BNX3 289 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 MRASO14807 208 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 ALADP13716 330 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 GRIA4P48058 902 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 SIM2Q14190 667 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-248ENST00000558190 PON2Q15165 354 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 PHF21BQ96EK2 531 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 IFT43Q96FT9 208 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 TMEM246Q9BRR3 403 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 MID1IP1Q9NPA3 183 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 SQORQ9Y6N5 450 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 ILVBLA1L0T0 632 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 TCP10L2B9ZVM9 353 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 NDUFB5O43674 189 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 NKX2-5P52952 324 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-248ENST00000558190 FASTKQ14296 549 aaKnown RBP3.76□□□□□ -1.81
ATXN3-248ENST00000558190 PLEKHG6Q3KR16 790 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 TTC23LQ6PF05 361 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 POTEHQ6S545 545 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 C12orf56Q8IXR9 622 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 GPR65Q8IYL9 337 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 NAT16Q8N8M0 369 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 CENPNQ96H22 339 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-248ENST00000558190 BLOC1S4Q9NUP1 217 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 CCDC154A6NI56 674 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 EDF1O60869 148 aaKnown RBP3.76□□□□□ -1.81
ATXN3-248ENST00000558190 HNRNPLP14866 589 aaKnown RBP eCLIP3.76□□□□□ -1.818e-11■■■■■ 35.6
ATXN3-248ENST00000558190 RBL1P28749 1068 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 HSD17B4P51659 736 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 ACTR3P61158 418 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 PPP1R3AQ16821 1122 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 CDC42EP4Q9H3Q1 356 aaKnown RBP3.76□□□□□ -1.81
ATXN3-248ENST00000558190 GSAPA4D1B5 854 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 GNB5O14775 395 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 BNIP3LO60238 219 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 BPGMP07738 259 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 CKMT2P17540 419 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 IL18R1Q13478 541 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 GPSM1Q86YR5 675 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 SVOPQ8N4V2 548 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 Q96MT0 163 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 ADAM30Q9UKF2 790 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 TRAFD1O14545 582 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-248ENST00000558190 TADA2AO75478 443 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 GLYATQ6IB77 296 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 GALNT5Q7Z7M9 940 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 BPIFB1Q8TDL5 484 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 FAM172AQ8WUF8 416 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 FRMD8P1Q9BZ68 369 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-248ENST00000558190 POTEMA6NI47 508 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 HNRNPDLO14979 420 aaKnown RBP3.76□□□□□ -1.81
ATXN3-248ENST00000558190 EXTL3O43909 919 aa3.76□□□□□ -1.81
ATXN3-248ENST00000558190 TGDSO95455 350 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms