RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 LMLNQ96KR4 655 aa17.79■□□□□ 0.44
GPHN-211ENST00000556020 BTN2A3PQ96KV6 586 aa17.79■□□□□ 0.44
GPHN-211ENST00000556020 NUP58Q9BVL2 599 aa17.79■□□□□ 0.44
GPHN-211ENST00000556020 SUSD2Q9UGT4 822 aa17.79■□□□□ 0.44
GPHN-211ENST00000556020 SLC12A6Q9UHW9 1150 aa17.79■□□□□ 0.44
GPHN-211ENST00000556020 ANGPTL2Q9UKU9 493 aa17.79■□□□□ 0.44
GPHN-211ENST00000556020 INTS6Q9UL03 887 aaKnown RBP17.79■□□□□ 0.44
GPHN-211ENST00000556020 FHOD1Q9Y613 1164 aa17.79■□□□□ 0.44
GPHN-211ENST00000556020 CHD8Q9HCK8 2581 aa17.78■□□□□ 0.44
GPHN-211ENST00000556020 KCNU1A8MYU2 1149 aa17.78■□□□□ 0.44
GPHN-211ENST00000556020 F5H5T6 163 aa17.78■□□□□ 0.44
GPHN-211ENST00000556020 OPHN1O60890 802 aa17.78■□□□□ 0.44
GPHN-211ENST00000556020 HSF2BPO75031 334 aa17.78■□□□□ 0.44
GPHN-211ENST00000556020 IGLV3-25P01717 112 aa17.78■□□□□ 0.44
GPHN-211ENST00000556020 DNTTP04053 509 aa17.78■□□□□ 0.44
GPHN-211ENST00000556020 SYPP08247 313 aa17.78■□□□□ 0.44
GPHN-211ENST00000556020 CSRP1P21291 193 aaKnown RBP17.78■□□□□ 0.44
GPHN-211ENST00000556020 PMLP29590 882 aa17.78■□□□□ 0.44
GPHN-211ENST00000556020 CTSOP43234 321 aaPredicted RBP17.78■□□□□ 0.44
GPHN-211ENST00000556020 RPS14P62263 151 aaKnown RBP17.78■□□□□ 0.44
GPHN-211ENST00000556020 FOXC1Q12948 553 aa17.78■□□□□ 0.44
GPHN-211ENST00000556020 NME3Q13232 169 aa17.78■□□□□ 0.44
GPHN-211ENST00000556020 DRAP1Q14919 205 aaPredicted RBP17.78■□□□□ 0.44
GPHN-211ENST00000556020 PITRM1Q5JRX3 1037 aa17.78■□□□□ 0.44
GPHN-211ENST00000556020 TAF3Q5VWG9 929 aa17.78■□□□□ 0.44
GPHN-211ENST00000556020 C11orf57Q6ZUT1 292 aaPredicted RBP17.78■□□□□ 0.44
GPHN-211ENST00000556020 SLC2A13Q96QE2 648 aa17.78■□□□□ 0.44
GPHN-211ENST00000556020 LMBRD1Q9NUN5 540 aa17.78■□□□□ 0.44
GPHN-211ENST00000556020 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.78■□□□□ 0.44
GPHN-211ENST00000556020 TAB2Q9NYJ8 693 aa17.78■□□□□ 0.44
GPHN-211ENST00000556020 SUN2Q9UH99 717 aa17.78■□□□□ 0.44
GPHN-211ENST00000556020 EIF2B4Q9UI10 523 aaKnown RBP17.78■□□□□ 0.44
GPHN-211ENST00000556020 NUMA1Q14980 2115 aa17.78■□□□□ 0.44
GPHN-211ENST00000556020 ACACBO00763 2458 aa17.77■□□□□ 0.44
GPHN-211ENST00000556020 METTL12A8MUP2 240 aa17.77■□□□□ 0.44
GPHN-211ENST00000556020 MOCS3O95396 460 aa17.77■□□□□ 0.44
GPHN-211ENST00000556020 IGLV3-19P01714 112 aa17.77■□□□□ 0.44
GPHN-211ENST00000556020 ASLP04424 464 aa17.77■□□□□ 0.44
GPHN-211ENST00000556020 GLI1P08151 1106 aa17.77■□□□□ 0.44
GPHN-211ENST00000556020 ABCB4P21439 1286 aa17.77■□□□□ 0.44
GPHN-211ENST00000556020 ACSL1P33121 698 aa17.77■□□□□ 0.44
GPHN-211ENST00000556020 KCNMA1Q12791 1236 aa17.77■□□□□ 0.44
GPHN-211ENST00000556020 PTPN20Q4JDL3 420 aa17.77■□□□□ 0.44
GPHN-211ENST00000556020 OLFML1Q6UWY5 402 aa17.77■□□□□ 0.44
GPHN-211ENST00000556020 DHX40Q8IX18 779 aaKnown RBP17.77■□□□□ 0.44
GPHN-211ENST00000556020 FAM71AQ8IYT1 594 aa17.77■□□□□ 0.44
GPHN-211ENST00000556020 CADM4Q8NFZ8 388 aa17.77■□□□□ 0.44
GPHN-211ENST00000556020 GANCQ8TET4 914 aa17.77■□□□□ 0.44
GPHN-211ENST00000556020 TTC17Q96AE7 1141 aa17.77■□□□□ 0.44
GPHN-211ENST00000556020 SLC32A1Q9H598 525 aa17.77■□□□□ 0.44
GPHN-211ENST00000556020 ASNSD1Q9NWL6 643 aa17.77■□□□□ 0.44
GPHN-211ENST00000556020 KIAA1522Q9P206 1035 aaPredicted RBP17.77■□□□□ 0.44
GPHN-211ENST00000556020 ERVW-1Q9UQF0 538 aa17.77■□□□□ 0.44
GPHN-211ENST00000556020 NFE2L3Q9Y4A8 694 aa17.77■□□□□ 0.44
GPHN-211ENST00000556020 TPRP12270 2363 aaKnown RBP17.77■□□□□ 0.44
GPHN-211ENST00000556020 NYNRINQ9P2P1 1898 aaKnown RBP17.77■□□□□ 0.43
GPHN-211ENST00000556020 A0A1B0GTW7 788 aa17.76■□□□□ 0.43
GPHN-211ENST00000556020 SIN3BO75182 1162 aa17.76■□□□□ 0.43
GPHN-211ENST00000556020 DAB1O75553 588 aa17.76■□□□□ 0.43
GPHN-211ENST00000556020 SLC2A3P11169 496 aa17.76■□□□□ 0.43
GPHN-211ENST00000556020 CEACAM1P13688 526 aa17.76■□□□□ 0.43
GPHN-211ENST00000556020 CCR1P32246 355 aa17.76■□□□□ 0.43
GPHN-211ENST00000556020 GGCXP38435 758 aa17.76■□□□□ 0.43
GPHN-211ENST00000556020 SNX16P57768 344 aa17.76■□□□□ 0.43
GPHN-211ENST00000556020 BPIFB4P59827 614 aa17.76■□□□□ 0.43
GPHN-211ENST00000556020 RNASE9P60153 205 aaKnown RBP17.76■□□□□ 0.43
GPHN-211ENST00000556020 SLC6A3Q01959 620 aa17.76■□□□□ 0.43
GPHN-211ENST00000556020 TTC31Q49AM3 519 aaPredicted RBP17.76■□□□□ 0.43
GPHN-211ENST00000556020 TCP11X2Q5H9J9 407 aa17.76■□□□□ 0.43
GPHN-211ENST00000556020 KLHDC7AQ5VTJ3 777 aa17.76■□□□□ 0.43
GPHN-211ENST00000556020 RNF219Q5W0B1 726 aaPredicted RBP17.76■□□□□ 0.43
GPHN-211ENST00000556020 ZNF776Q68DI1 518 aaPredicted RBP17.76■□□□□ 0.43
GPHN-211ENST00000556020 DPY19L2P1Q6NXN4 242 aa17.76■□□□□ 0.43
GPHN-211ENST00000556020 APCDD1Q8J025 514 aa17.76■□□□□ 0.43
GPHN-211ENST00000556020 MYO19Q96H55 970 aa17.76■□□□□ 0.43
GPHN-211ENST00000556020 MRGPRX3Q96LB0 322 aa17.76■□□□□ 0.43
GPHN-211ENST00000556020 C6orf106Q9H6K1 298 aaPredicted RBP17.76■□□□□ 0.43
GPHN-211ENST00000556020 FBRSQ9HAH7 460 aa17.76■□□□□ 0.43
GPHN-211ENST00000556020 SPAARA0A1B0GVQ0 90 aa17.75■□□□□ 0.43
GPHN-211ENST00000556020 TTC34A8MYJ7 566 aa17.75■□□□□ 0.43
GPHN-211ENST00000556020 M0QYT0 321 aa17.75■□□□□ 0.43
GPHN-211ENST00000556020 CYP11B1P15538 503 aa17.75■□□□□ 0.43
GPHN-211ENST00000556020 PDGFRAP16234 1089 aa17.75■□□□□ 0.43
GPHN-211ENST00000556020 EEF1GP26641 437 aaKnown RBP17.75■□□□□ 0.43
GPHN-211ENST00000556020 CENPCQ03188 943 aa17.75■□□□□ 0.43
GPHN-211ENST00000556020 GRIK2Q13002 908 aa17.75■□□□□ 0.43
GPHN-211ENST00000556020 HNRNPA1L2Q32P51 320 aaKnown RBP17.75■□□□□ 0.43
GPHN-211ENST00000556020 RABGAP1LQ5R372 815 aa17.75■□□□□ 0.43
GPHN-211ENST00000556020 CCAR2Q8N163 923 aaKnown RBP17.75■□□□□ 0.43
GPHN-211ENST00000556020 TMEM35BQ8NCS4 154 aa17.75■□□□□ 0.43
GPHN-211ENST00000556020 DNASE2BQ8WZ79 361 aa17.75■□□□□ 0.43
GPHN-211ENST00000556020 RPL10LQ96L21 214 aaKnown RBP17.75■□□□□ 0.43
GPHN-211ENST00000556020 RPRD1AQ96P16 312 aaPredicted RBP17.75■□□□□ 0.43
GPHN-211ENST00000556020 PRMT1Q99873 361 aaKnown RBP17.75■□□□□ 0.43
GPHN-211ENST00000556020 BTBD1Q9H0C5 482 aa17.75■□□□□ 0.43
GPHN-211ENST00000556020 VPS16Q9H269 839 aa17.75■□□□□ 0.43
GPHN-211ENST00000556020 VANGL2Q9ULK5 521 aa17.75■□□□□ 0.43
GPHN-211ENST00000556020 FAM47DPA6NHR8 397 aa17.74■□□□□ 0.43
GPHN-211ENST00000556020 BCAT2O15382 392 aaPredicted RBP17.74■□□□□ 0.43
GPHN-211ENST00000556020 FSBPO95073 299 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms