RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 ANKRD20A2Q5SQ80 823 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 HECTD3Q5T447 861 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 ANKRD20A1Q5TYW2 823 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 ANKRD20A3Q5VUR7 823 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 LILRA6Q6PI73 481 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 SPATA31D4Q6ZUB0 917 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 TMC7Q7Z402 723 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 ATP6V0D2Q8N8Y2 350 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 PSMG2Q969U7 264 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 PHACTR1Q9C0D0 580 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 CATSPERBQ9H7T0 1116 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 HBS1LQ9Y450 684 aaKnown RBP20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 RNF103O00237 685 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 COCHO43405 550 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 ACSL3O95573 720 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 HMBSP08397 361 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 KPNA1P52294 538 aaPredicted RBP20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 PLD1Q13393 1074 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 FASTKD3Q14CZ7 662 aaKnown RBP20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 HIF1AQ16665 826 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 FAXCQ5TGI0 409 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 TMEM150AQ86TG1 271 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 TADA2BQ86TJ2 420 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 GOLGA6L1Q8N7Z2 621 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 DPF3Q92784 378 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 CELF6Q96J87 481 aaKnown RBP20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 C9orf72Q96LT7 481 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 PRMT1Q99873 361 aaKnown RBP20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 BRD8Q9H0E9 1235 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 ALG13Q9NP73 1137 aaKnown RBP20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 SAYSD1Q9NPB0 183 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 NDFIP2Q9NV92 336 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 TRPM5Q9NZQ8 1165 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 MPP6Q9NZW5 540 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 SLC12A6Q9UHW9 1150 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 IRAK3Q9Y616 596 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 IGLV3-10A0A075B6K4 115 aa20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 ALOX15BO15296 676 aa20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 POLR3GO15318 223 aaPredicted RBP20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 KCNQ1P51787 676 aa20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 EPHB3P54753 998 aa20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 ERVFC1P60507 584 aa20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 TAF12Q16514 161 aa20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 MSS51Q4VC12 460 aa20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 FNBP1LQ5T0N5 605 aa20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 NLRP14Q86W24 1093 aa20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 ARHGAP12Q8IWW6 846 aa20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 RTL3Q8N8U3 475 aaKnown RBP20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 VANGL2Q9ULK5 521 aa20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 LZTS1Q9Y250 596 aa20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 CHD7Q9P2D1 2997 aa20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 WASH4PA8MWX3 477 aa20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 GOLGA8KD6RF30 607 aa20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 E7ESA3 106 aa20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 KCNK1O00180 336 aa20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 CA8P35219 290 aa20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 CTNNB1P35222 781 aa20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 SYCP2LQ5T4T6 812 aa20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 CENPUQ71F23 418 aa20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 LZTR1Q8N653 840 aa20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 UHMK1Q8TAS1 419 aaKnown RBP20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 KLHL5Q96PQ7 755 aa20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 TCF25Q9BQ70 676 aa20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 TMBIM4Q9HC24 238 aa20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 PPARGC1AQ9UBK2 798 aaKnown RBP20.1■□□□□ 0.81
RBFOX1-215ENST00000553186 LINC01553A4QN01 128 aa20.09■□□□□ 0.81
RBFOX1-215ENST00000553186 OPHN1O60890 802 aa20.09■□□□□ 0.81
RBFOX1-215ENST00000553186 IRAK1P51617 712 aa20.09■□□□□ 0.81
RBFOX1-215ENST00000553186 ARL4CP56559 192 aa20.09■□□□□ 0.81
RBFOX1-215ENST00000553186 AFMIDQ63HM1 303 aa20.09■□□□□ 0.81
RBFOX1-215ENST00000553186 NUGGCQ68CJ6 796 aa20.09■□□□□ 0.81
RBFOX1-215ENST00000553186 ARHGEF18Q6ZSZ5 1173 aa20.09■□□□□ 0.81
RBFOX1-215ENST00000553186 DEPDC1BQ8WUY9 529 aa20.09■□□□□ 0.81
RBFOX1-215ENST00000553186 FERMT1Q9BQL6 677 aa20.09■□□□□ 0.81
RBFOX1-215ENST00000553186 CEP41Q9BYV8 373 aa20.09■□□□□ 0.81
RBFOX1-215ENST00000553186 ZNF189O75820 626 aaPredicted RBP20.08■□□□□ 0.81
RBFOX1-215ENST00000553186 OAS1P00973 400 aaKnown RBP20.08■□□□□ 0.81
RBFOX1-215ENST00000553186 APRTP07741 180 aa20.08■□□□□ 0.81
RBFOX1-215ENST00000553186 DNAJB1P25685 340 aa20.08■□□□□ 0.81
RBFOX1-215ENST00000553186 PPP3CCP48454 512 aa20.08■□□□□ 0.81
RBFOX1-215ENST00000553186 IFFO1Q0D2I5 559 aa20.08■□□□□ 0.81
RBFOX1-215ENST00000553186 PDIA2Q13087 525 aaKnown RBP20.08■□□□□ 0.81
RBFOX1-215ENST00000553186 CBLBQ13191 982 aa20.08■□□□□ 0.81
RBFOX1-215ENST00000553186 SEMA5AQ13591 1074 aa20.08■□□□□ 0.81
RBFOX1-215ENST00000553186 NADSYN1Q6IA69 706 aa20.08■□□□□ 0.81
RBFOX1-215ENST00000553186 FBXL22Q6P050 247 aa20.08■□□□□ 0.81
RBFOX1-215ENST00000553186 ZNF567Q8N184 647 aa20.08■□□□□ 0.81
RBFOX1-215ENST00000553186 ZSCAN18Q8TBC5 510 aaPredicted RBP20.08■□□□□ 0.81
RBFOX1-215ENST00000553186 WDR83Q9BRX9 315 aaKnown RBP20.08■□□□□ 0.81
RBFOX1-215ENST00000553186 HTATIP2Q9BUP3 242 aa20.08■□□□□ 0.81
RBFOX1-215ENST00000553186 RNF38Q9H0F5 515 aa20.08■□□□□ 0.81
RBFOX1-215ENST00000553186 ZNF334Q9HCZ1 680 aaPredicted RBP20.08■□□□□ 0.81
RBFOX1-215ENST00000553186 VPS18Q9P253 973 aa20.08■□□□□ 0.81
RBFOX1-215ENST00000553186 PLXNA4Q9HCM2 1894 aa20.08■□□□□ 0.8
RBFOX1-215ENST00000553186 C2orf78A6NCI8 922 aa20.08■□□□□ 0.8
RBFOX1-215ENST00000553186 BANF1O75531 89 aa20.08■□□□□ 0.8
RBFOX1-215ENST00000553186 STK10O94804 968 aaKnown RBP20.08■□□□□ 0.8
RBFOX1-215ENST00000553186 ARHGEF15O94989 841 aa20.08■□□□□ 0.8
RBFOX1-215ENST00000553186 ADH1AP07327 375 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms