RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 AFPP02771 609 aaKnown RBP12.34□□□□□ -0.43
GABPB1-206ENST00000543881 LTFP02788 710 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 HLA-EP13747 358 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 HLA-FP30511 346 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 GRK6P43250 576 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 GPD2P43304 727 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 CETN1Q12798 172 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 STILQ15468 1287 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 ADGRF1Q5T601 910 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 DHRS13Q6UX07 377 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 WFDC5Q8TCV5 224 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 HSFY1Q96LI6 401 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 CIPCQ9C0C6 399 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 MIS12Q9H081 205 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 PCED1AQ9H1Q7 454 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.34□□□□□ -0.43
GABPB1-206ENST00000543881 NUMA1Q14980 2115 aa12.33□□□□□ -0.44
GABPB1-206ENST00000543881 E9PAM4 449 aa12.33□□□□□ -0.44
GABPB1-206ENST00000543881 LATS1O95835 1130 aa12.33□□□□□ -0.44
GABPB1-206ENST00000543881 EPHX1P07099 455 aa12.33□□□□□ -0.44
GABPB1-206ENST00000543881 SLC6A4P31645 630 aa12.33□□□□□ -0.44
GABPB1-206ENST00000543881 RPL34P49207 117 aaKnown RBP12.33□□□□□ -0.44
GABPB1-206ENST00000543881 EIF4HQ15056 248 aaKnown RBP12.33□□□□□ -0.44
GABPB1-206ENST00000543881 TEAD4Q15561 434 aa12.33□□□□□ -0.44
GABPB1-206ENST00000543881 CAMK4Q16566 473 aa12.33□□□□□ -0.44
GABPB1-206ENST00000543881 FAM133BQ5BKY9 247 aaKnown RBP12.33□□□□□ -0.44
GABPB1-206ENST00000543881 DENND1BQ6P3S1 775 aa12.33□□□□□ -0.44
GABPB1-206ENST00000543881 RFWD3Q6PCD5 774 aa12.33□□□□□ -0.44
GABPB1-206ENST00000543881 GJB7Q6PEY0 223 aa12.33□□□□□ -0.44
GABPB1-206ENST00000543881 KIAA0907Q7Z7F0 614 aaPredicted RBP12.33□□□□□ -0.44
GABPB1-206ENST00000543881 IGSF8Q969P0 613 aa12.33□□□□□ -0.44
GABPB1-206ENST00000543881 TMA16Q96EY4 203 aaKnown RBP12.33□□□□□ -0.44
GABPB1-206ENST00000543881 MYEOVQ96EZ4 313 aa12.33□□□□□ -0.44
GABPB1-206ENST00000543881 C6orf106Q9H6K1 298 aaPredicted RBP12.33□□□□□ -0.44
GABPB1-206ENST00000543881 ACP6Q9NPH0 428 aa12.33□□□□□ -0.44
GABPB1-206ENST00000543881 CYTH4Q9UIA0 394 aa12.33□□□□□ -0.44
GABPB1-206ENST00000543881 ANKRD6Q9Y2G4 727 aa12.33□□□□□ -0.44
GABPB1-206ENST00000543881 KNTC1P50748 2209 aa12.32□□□□□ -0.44
GABPB1-206ENST00000543881 MUC22E2RYF6 1773 aaPredicted RBP12.32□□□□□ -0.44
GABPB1-206ENST00000543881 PLK4O00444 970 aa12.32□□□□□ -0.44
GABPB1-206ENST00000543881 KCNK3O14649 394 aa12.32□□□□□ -0.44
GABPB1-206ENST00000543881 ATXN7O15265 892 aaPredicted RBP12.32□□□□□ -0.44
GABPB1-206ENST00000543881 PCDHGA12O60330 932 aa12.32□□□□□ -0.44
GABPB1-206ENST00000543881 KRT5P13647 590 aa12.32□□□□□ -0.44
GABPB1-206ENST00000543881 ITPKBP27987 946 aa12.32□□□□□ -0.44
GABPB1-206ENST00000543881 ACSL1P33121 698 aa12.32□□□□□ -0.44
GABPB1-206ENST00000543881 GRIA4P48058 902 aa12.32□□□□□ -0.44
GABPB1-206ENST00000543881 CCT8P50990 548 aa12.32□□□□□ -0.44
GABPB1-206ENST00000543881 APBA1Q02410 837 aa12.32□□□□□ -0.44
GABPB1-206ENST00000543881 E2F5Q15329 346 aa12.32□□□□□ -0.44
GABPB1-206ENST00000543881 PIK3R6Q5UE93 754 aa12.32□□□□□ -0.44
GABPB1-206ENST00000543881 NADSYN1Q6IA69 706 aa12.32□□□□□ -0.44
GABPB1-206ENST00000543881 LAYNQ6UX15 382 aa12.32□□□□□ -0.44
GABPB1-206ENST00000543881 SERPINA13PQ6UXR4 307 aa12.32□□□□□ -0.44
GABPB1-206ENST00000543881 CHST9Q7L1S5 443 aa12.32□□□□□ -0.44
GABPB1-206ENST00000543881 ADIPOR2Q86V24 386 aa12.32□□□□□ -0.44
GABPB1-206ENST00000543881 TMPRSS12Q86WS5 348 aa12.32□□□□□ -0.44
GABPB1-206ENST00000543881 IRF2BP1Q8IU81 584 aa12.32□□□□□ -0.44
GABPB1-206ENST00000543881 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.32□□□□□ -0.443e-6■■□□□ 12.2
GABPB1-206ENST00000543881 CYB5D2Q8WUJ1 264 aa12.32□□□□□ -0.44
GABPB1-206ENST00000543881 FCRL2Q96LA5 508 aaPredicted RBP12.32□□□□□ -0.44
GABPB1-206ENST00000543881 CRACR2AQ9BSW2 395 aa12.32□□□□□ -0.44
GABPB1-206ENST00000543881 TMEM245Q9H330 911 aa12.32□□□□□ -0.44
GABPB1-206ENST00000543881 TM9SF3Q9HD45 589 aa12.32□□□□□ -0.44
GABPB1-206ENST00000543881 UBE2TQ9NPD8 197 aaPredicted RBP12.32□□□□□ -0.44
GABPB1-206ENST00000543881 OSGEPQ9NPF4 335 aa12.32□□□□□ -0.44
GABPB1-206ENST00000543881 ABCB8Q9NUT2 735 aa12.32□□□□□ -0.44
GABPB1-206ENST00000543881 KIAA1468Q9P260 1216 aa12.32□□□□□ -0.44
GABPB1-206ENST00000543881 NAALADL1Q9UQQ1 740 aa12.32□□□□□ -0.44
GABPB1-206ENST00000543881 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.32□□□□□ -0.44
GABPB1-206ENST00000543881 BECN2A8MW95 431 aa12.31□□□□□ -0.44
GABPB1-206ENST00000543881 H0Y8X5 98 aa12.31□□□□□ -0.44
GABPB1-206ENST00000543881 TIMM44O43615 452 aa12.31□□□□□ -0.44
GABPB1-206ENST00000543881 ACSL4O60488 711 aa12.31□□□□□ -0.44
GABPB1-206ENST00000543881 FBXO21O94952 628 aa12.31□□□□□ -0.44
GABPB1-206ENST00000543881 SLC9A1P19634 815 aa12.31□□□□□ -0.44
GABPB1-206ENST00000543881 CD70P32970 193 aa12.31□□□□□ -0.44
GABPB1-206ENST00000543881 TBX4P57082 545 aa12.31□□□□□ -0.44
GABPB1-206ENST00000543881 ZNF445P59923 1031 aa12.31□□□□□ -0.44
GABPB1-206ENST00000543881 SYPL2Q5VXT5 272 aa12.31□□□□□ -0.44
GABPB1-206ENST00000543881 ZNF366Q8N895 744 aa12.31□□□□□ -0.44
GABPB1-206ENST00000543881 OR2T3Q8NH03 318 aa12.31□□□□□ -0.44
GABPB1-206ENST00000543881 DQX1Q8TE96 717 aaKnown RBP12.31□□□□□ -0.44
GABPB1-206ENST00000543881 NXPE2Q96DL1 559 aa12.31□□□□□ -0.44
GABPB1-206ENST00000543881 LMLNQ96KR4 655 aa12.31□□□□□ -0.44
GABPB1-206ENST00000543881 PRICKLE1Q96MT3 831 aaPredicted RBP12.31□□□□□ -0.44
GABPB1-206ENST00000543881 SLC4A5Q9BY07 1137 aa12.31□□□□□ -0.44
GABPB1-206ENST00000543881 PRORYQ9H606 182 aa12.31□□□□□ -0.44
GABPB1-206ENST00000543881 FTSJ1Q9UET6 329 aa12.31□□□□□ -0.44
GABPB1-206ENST00000543881 RWDD2AQ9UIY3 292 aa12.31□□□□□ -0.44
GABPB1-206ENST00000543881 GGA2Q9UJY4 613 aa12.31□□□□□ -0.44
GABPB1-206ENST00000543881 PAPSS1O43252 624 aaPredicted RBP12.3□□□□□ -0.44
GABPB1-206ENST00000543881 TBL1XO60907 577 aa12.3□□□□□ -0.44
GABPB1-206ENST00000543881 LETM1O95202 739 aaPredicted RBP12.3□□□□□ -0.44
GABPB1-206ENST00000543881 PABPC1P11940 636 aaKnown RBP12.3□□□□□ -0.44
GABPB1-206ENST00000543881 PLA2G2AP14555 144 aa12.3□□□□□ -0.44
GABPB1-206ENST00000543881 EIF2S3P41091 472 aaKnown RBP12.3□□□□□ -0.44
GABPB1-206ENST00000543881 SLC11A2P49281 568 aa12.3□□□□□ -0.44
GABPB1-206ENST00000543881 UBE2HP62256 183 aa12.3□□□□□ -0.44
GABPB1-206ENST00000543881 IL9RQ01113 521 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms