RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 PACS1Q6VY07 963 aa11.84□□□□□ -0.51
C11orf54-214ENST00000540113 C4orf50Q6ZRC1 276 aa11.84□□□□□ -0.51
C11orf54-214ENST00000540113 SAPCD2Q86UD0 394 aa11.84□□□□□ -0.51
C11orf54-214ENST00000540113 SIX6OS1Q8N1H7 587 aa11.84□□□□□ -0.51
C11orf54-214ENST00000540113 GSTCDQ8NEC7 633 aa11.84□□□□□ -0.51
C11orf54-214ENST00000540113 EDEM1Q92611 657 aa11.84□□□□□ -0.51
C11orf54-214ENST00000540113 TNIP3Q96KP6 325 aa11.84□□□□□ -0.51
C11orf54-214ENST00000540113 FCRL3Q96P31 734 aaPredicted RBP11.84□□□□□ -0.51
C11orf54-214ENST00000540113 TSPAN18Q96SJ8 248 aa11.84□□□□□ -0.51
C11orf54-214ENST00000540113 APBA2Q99767 749 aa11.84□□□□□ -0.51
C11orf54-214ENST00000540113 ULBP1Q9BZM6 244 aa11.84□□□□□ -0.51
C11orf54-214ENST00000540113 YY1AP1Q9H869 796 aa11.84□□□□□ -0.51
C11orf54-214ENST00000540113 CRTAC1Q9NQ79 661 aa11.84□□□□□ -0.51
C11orf54-214ENST00000540113 Q9Y3F1 56 aa11.84□□□□□ -0.51
C11orf54-214ENST00000540113 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.84□□□□□ -0.51
C11orf54-214ENST00000540113 H3BRJ5 948 aa11.83□□□□□ -0.52
C11orf54-214ENST00000540113 DAB1O75553 588 aa11.83□□□□□ -0.52
C11orf54-214ENST00000540113 KRT36O76013 467 aa11.83□□□□□ -0.52
C11orf54-214ENST00000540113 GSRP00390 522 aa11.83□□□□□ -0.52
C11orf54-214ENST00000540113 USP17L7P0C7H9 530 aa11.83□□□□□ -0.52
C11orf54-214ENST00000540113 CRHR1P34998 444 aa11.83□□□□□ -0.52
C11orf54-214ENST00000540113 STX3Q13277 289 aa11.83□□□□□ -0.52
C11orf54-214ENST00000540113 CRYMQ14894 314 aa11.83□□□□□ -0.52
C11orf54-214ENST00000540113 TAF11Q15544 211 aa11.83□□□□□ -0.52
C11orf54-214ENST00000540113 CMC1Q7Z7K0 106 aa11.83□□□□□ -0.52
C11orf54-214ENST00000540113 RASSF3Q86WH2 238 aa11.83□□□□□ -0.52
C11orf54-214ENST00000540113 PPP1R14CQ8TAE6 165 aa11.83□□□□□ -0.52
C11orf54-214ENST00000540113 SHKBP1Q8TBC3 707 aa11.83□□□□□ -0.52
C11orf54-214ENST00000540113 CLPTM1LQ96KA5 538 aa11.83□□□□□ -0.52
C11orf54-214ENST00000540113 ZNF778Q96MU6 729 aa11.83□□□□□ -0.52
C11orf54-214ENST00000540113 RILPQ96NA2 401 aa11.83□□□□□ -0.52
C11orf54-214ENST00000540113 NPY6RQ99463 290 aa11.83□□□□□ -0.52
C11orf54-214ENST00000540113 PAAF1Q9BRP4 392 aa11.83□□□□□ -0.52
C11orf54-214ENST00000540113 KATNAL1Q9BW62 490 aa11.83□□□□□ -0.52
C11orf54-214ENST00000540113 TLE6Q9H808 572 aa11.83□□□□□ -0.52
C11orf54-214ENST00000540113 ACSS2Q9NR19 701 aa11.83□□□□□ -0.52
C11orf54-214ENST00000540113 DDX43Q9NXZ2 648 aaKnown RBP11.83□□□□□ -0.52
C11orf54-214ENST00000540113 UBP1Q9NZI7 540 aa11.83□□□□□ -0.52
C11orf54-214ENST00000540113 SCN10AQ9Y5Y9 1956 aa11.83□□□□□ -0.52
C11orf54-214ENST00000540113 NUP205Q92621 2012 aa11.83□□□□□ -0.52
C11orf54-214ENST00000540113 MYBPHLA2RUH7 354 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 B2RBV5 119 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 GABRDO14764 452 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 CAPN9O14815 690 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 KLF11O14901 512 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 DNAJC6O75061 913 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 RGS2P41220 211 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 INHBEP58166 350 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 MRPS6P82932 125 aaKnown RBP11.82□□□□□ -0.52
C11orf54-214ENST00000540113 NIPAL4Q0D2K0 466 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 PAN2Q504Q3 1202 aaKnown RBP11.82□□□□□ -0.52
C11orf54-214ENST00000540113 ATG16L1Q676U5 607 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 LRRC8BQ6P9F7 803 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 BNIPLQ7Z465 357 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 DTX3LQ8TDB6 740 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 MCUR1Q96AQ8 359 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 MOCOSQ96EN8 888 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 GORASP1Q9BQQ3 440 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 CDY2AQ9Y6F7 541 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 BPTFQ12830 3046 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 MEI4A8MW99 385 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 GOLGA8TH3BQL2 631 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 UPP2O95045 317 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 TPH1P17752 444 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 ERCC2P18074 760 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 NOS2P35228 1153 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 FDFT1P37268 417 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 PTDSS1P48651 473 aaKnown RBP11.82□□□□□ -0.52
C11orf54-214ENST00000540113 SARNPP82979 210 aaKnown RBP11.82□□□□□ -0.52
C11orf54-214ENST00000540113 PDE1BQ01064 536 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 IFRD2Q12894 506 aaPredicted RBP11.82□□□□□ -0.52
C11orf54-214ENST00000540113 ACSBG2Q5FVE4 666 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 C4orf22Q6V702 233 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 CRLF3Q8IUI8 442 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 NPWQ8N729 165 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 C3orf58Q8NDZ4 430 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 NT5C3BQ969T7 300 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 MTBPQ96DY7 904 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 C7orf26Q96N11 449 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 AGAP2Q99490 1192 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 MIOSQ9NXC5 875 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 KLHL8Q9P2G9 620 aaPredicted RBP11.82□□□□□ -0.52
C11orf54-214ENST00000540113 HBS1LQ9Y450 684 aaKnown RBP11.82□□□□□ -0.52
C11orf54-214ENST00000540113 RPS6KL1Q9Y6S9 549 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 SHROOM3Q8TF72 1996 aa11.82□□□□□ -0.52
C11orf54-214ENST00000540113 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.81□□□□□ -0.52
C11orf54-214ENST00000540113 PRR5-ARHGAP8B1AHC4 643 aa11.81□□□□□ -0.52
C11orf54-214ENST00000540113 SKAP2O75563 359 aaPredicted RBP11.81□□□□□ -0.52
C11orf54-214ENST00000540113 ITGA2BP08514 1039 aa11.81□□□□□ -0.52
C11orf54-214ENST00000540113 SLC10A3P09131 477 aa11.81□□□□□ -0.52
C11orf54-214ENST00000540113 GSTA2P09210 222 aa11.81□□□□□ -0.52
C11orf54-214ENST00000540113 CTSHP09668 335 aa11.81□□□□□ -0.52
C11orf54-214ENST00000540113 NCAM1P13591 858 aa11.81□□□□□ -0.52
C11orf54-214ENST00000540113 ARRB2P32121 409 aa11.81□□□□□ -0.52
C11orf54-214ENST00000540113 CLCNKBP51801 687 aa11.81□□□□□ -0.52
C11orf54-214ENST00000540113 ARHGAP8P85298 464 aa11.81□□□□□ -0.52
C11orf54-214ENST00000540113 STEAP4Q687X5 459 aa11.81□□□□□ -0.52
C11orf54-214ENST00000540113 RSPH3Q86UC2 560 aa11.81□□□□□ -0.52
C11orf54-214ENST00000540113 GAD1Q99259 594 aa11.81□□□□□ -0.52
C11orf54-214ENST00000540113 SMOQ99835 787 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms