RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 SLC24A2Q9UI40 661 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 ABT1Q9ULW3 272 aaKnown RBP11.89□□□□□ -0.51
USP35-207ENST00000530546 INPP5FQ9Y2H2 1132 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 RALGAPA2Q2PPJ7 1873 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 WDR91A4D1P6 747 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 NRP1O14786 923 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 ASMTLO95671 621 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 HOXC8P31273 242 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 CD52P31358 61 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 ARL4AP40617 200 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 CD151P48509 253 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 INHBCP55103 352 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 MRPS5P82675 430 aaKnown RBP11.89□□□□□ -0.51
USP35-207ENST00000530546 MFSD14CQ5VZR4 134 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 CDKL3Q8IVW4 592 aaPredicted RBP11.89□□□□□ -0.51
USP35-207ENST00000530546 CTAGE3PQ8IX95 158 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 TRIM56Q9BRZ2 755 aaKnown RBP11.89□□□□□ -0.51
USP35-207ENST00000530546 RHOBTB2Q9BYZ6 727 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 ULBP1Q9BZM6 244 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 KLC2Q9H0B6 622 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 NDUFA13Q9P0J0 144 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 ZNF236Q9UL36 1845 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 BCLAF3A2AJT9 711 aaKnown RBP11.88□□□□□ -0.51
USP35-207ENST00000530546 ARL5CA6NH57 179 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 SLC10A3P09131 477 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 UBTFL6P0CB48 400 aaPredicted RBP11.88□□□□□ -0.51
USP35-207ENST00000530546 DNAJC3Q13217 504 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 SPARCL1Q14515 664 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 SLC1A5Q15758 541 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 KLHL38Q2WGJ6 581 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 KBTBD12Q3ZCT8 623 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 ARMCX6Q7L4S7 300 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 LIMS2Q7Z4I7 341 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 SLC7A14Q8TBB6 771 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 SEPT10Q9P0V9 454 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 MAD1L1Q9Y6D9 718 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 SMIM31A0A1B0GVY4 71 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 TCRBV9S1A1TA0A576 114 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 CFAP69A5D8W1 941 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 CHADO15335 359 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 ATP9BO43861 1147 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 CYBAP13498 195 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 GJA9P57773 515 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 DSG1Q02413 1049 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 PDK4Q16654 411 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 CTC1Q2NKJ3 1217 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 SLC25A52Q3SY17 297 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 NCBP2-AS2Q69YL0 99 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 AGMOQ6ZNB7 445 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 GPRIN1Q7Z2K8 1008 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 CLNKQ7Z7G1 428 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 PRPF39Q86UA1 669 aaKnown RBP11.88□□□□□ -0.51
USP35-207ENST00000530546 HACE1Q8IYU2 909 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 RNF168Q8IYW5 571 aaPredicted RBP11.88□□□□□ -0.51
USP35-207ENST00000530546 NAT14Q8WUY8 206 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 LGMNQ99538 433 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 DTLQ9NZJ0 730 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 IKBKGQ9Y6K9 419 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 FAM155BO75949 473 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 USP17L7P0C7H9 530 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 GRIA1P42261 906 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 RPL34P49207 117 aaKnown RBP11.88□□□□□ -0.51
USP35-207ENST00000530546 SEPT7Q16181 437 aaKnown RBP11.88□□□□□ -0.51
USP35-207ENST00000530546 TMEM259Q4ZIN3 620 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 HEATR6Q6AI08 1181 aaKnown RBP11.88□□□□□ -0.51
USP35-207ENST00000530546 DENND5BQ6ZUT9 1274 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 STRADAQ7RTN6 431 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 PCED1BQ96HM7 432 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 CYTH2Q99418 400 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 SENP6Q9GZR1 1112 aaPredicted RBP11.88□□□□□ -0.51
USP35-207ENST00000530546 EPB41L1Q9H4G0 881 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 ALG13Q9NP73 1137 aaKnown RBP11.88□□□□□ -0.51
USP35-207ENST00000530546 TMEM30AQ9NV96 361 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 SLC38A7Q9NVC3 462 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 PIH1D1Q9NWS0 290 aaKnown RBP11.88□□□□□ -0.51
USP35-207ENST00000530546 GRID1Q9ULK0 1009 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 FZD10Q9ULW2 581 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 TEX264Q9Y6I9 313 aa11.88□□□□□ -0.51
USP35-207ENST00000530546 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.87□□□□□ -0.51
USP35-207ENST00000530546 YJEFN3A6XGL0 299 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 GABRDO14764 452 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 GSC2O15499 205 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 PRPF4O43172 522 aaKnown RBP eCLIP11.87□□□□□ -0.51
USP35-207ENST00000530546 MFSD11O43934 449 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 DAB1O75553 588 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 ASGR1P07306 291 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 ITGA2BP08514 1039 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 PRKCZQ05513 592 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 SULT2A1Q06520 285 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 SMAD1Q15797 465 aaKnown RBP11.87□□□□□ -0.51
USP35-207ENST00000530546 OTUD1Q5VV17 481 aaPredicted RBP11.87□□□□□ -0.51
USP35-207ENST00000530546 FYB2Q5VWT5 728 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 KLC3Q6P597 504 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 NLRP9Q7RTR0 991 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 FAM35AQ86V20 835 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 VPS52Q8N1B4 723 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 ARHGAP24Q8N264 748 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 LRRC43Q8N309 656 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 PPM1NQ8N819 430 aa11.87□□□□□ -0.51
USP35-207ENST00000530546 CCNYQ8ND76 341 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms