RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 ANLNQ9NQW6 1124 aa16.5■□□□□ 0.23
SSBP1-214ENST00000498107 PPARGC1AQ9UBK2 798 aaKnown RBP16.5■□□□□ 0.23
SSBP1-214ENST00000498107 FZD10Q9ULW2 581 aa16.5■□□□□ 0.23
SSBP1-214ENST00000498107 A0A0A6YYK5 440 aaPredicted RBP16.49■□□□□ 0.23
SSBP1-214ENST00000498107 DRGXA6NNA5 263 aa16.49■□□□□ 0.23
SSBP1-214ENST00000498107 E9PAM4 449 aa16.49■□□□□ 0.23
SSBP1-214ENST00000498107 I6L893 689 aaPredicted RBP16.49■□□□□ 0.23
SSBP1-214ENST00000498107 ARHGAP6O43182 974 aa16.49■□□□□ 0.23
SSBP1-214ENST00000498107 TIMM44O43615 452 aa16.49■□□□□ 0.23
SSBP1-214ENST00000498107 SRGAP2O75044 1071 aa16.49■□□□□ 0.23
SSBP1-214ENST00000498107 PROSCO94903 275 aa16.49■□□□□ 0.23
SSBP1-214ENST00000498107 MOCS3O95396 460 aa16.49■□□□□ 0.23
SSBP1-214ENST00000498107 DCNP07585 359 aaKnown RBP16.49■□□□□ 0.23
SSBP1-214ENST00000498107 L1CAMP32004 1257 aa16.49■□□□□ 0.23
SSBP1-214ENST00000498107 MAN1A1P33908 653 aa16.49■□□□□ 0.23
SSBP1-214ENST00000498107 HTR7P34969 479 aa16.49■□□□□ 0.23
SSBP1-214ENST00000498107 SGSHP51688 502 aa16.49■□□□□ 0.23
SSBP1-214ENST00000498107 ZNF135P52742 658 aaPredicted RBP16.49■□□□□ 0.23
SSBP1-214ENST00000498107 MRPS21P82921 87 aaKnown RBP16.49■□□□□ 0.23
SSBP1-214ENST00000498107 FZD5Q13467 585 aa16.49■□□□□ 0.23
SSBP1-214ENST00000498107 SLC12A1Q13621 1099 aa16.49■□□□□ 0.23
SSBP1-214ENST00000498107 EIF4HQ15056 248 aaKnown RBP16.49■□□□□ 0.23
SSBP1-214ENST00000498107 HSF5Q4G112 596 aaPredicted RBP16.49■□□□□ 0.23
SSBP1-214ENST00000498107 RAB6CQ53S08 254 aa16.49■□□□□ 0.23
SSBP1-214ENST00000498107 ERMARDQ5T6L9 678 aa16.49■□□□□ 0.23
SSBP1-214ENST00000498107 NAIF1Q69YI7 327 aaPredicted RBP16.49■□□□□ 0.23
SSBP1-214ENST00000498107 AHI1Q8N157 1196 aa16.49■□□□□ 0.23
SSBP1-214ENST00000498107 CCAR2Q8N163 923 aaKnown RBP16.49■□□□□ 0.23
SSBP1-214ENST00000498107 CFAP52Q8N1V2 620 aa16.49■□□□□ 0.23
SSBP1-214ENST00000498107 CARNMT1Q8N4J0 409 aa16.49■□□□□ 0.23
SSBP1-214ENST00000498107 EPAS1Q99814 870 aa16.49■□□□□ 0.23
SSBP1-214ENST00000498107 ZYG11BQ9C0D3 744 aa16.49■□□□□ 0.23
SSBP1-214ENST00000498107 RAB6CQ9H0N0 254 aa16.49■□□□□ 0.23
SSBP1-214ENST00000498107 KIAA1522Q9P206 1035 aaPredicted RBP16.49■□□□□ 0.23
SSBP1-214ENST00000498107 USP18Q9UMW8 372 aa16.49■□□□□ 0.23
SSBP1-214ENST00000498107 STARD13Q9Y3M8 1113 aa16.49■□□□□ 0.23
SSBP1-214ENST00000498107 IGLV3-10A0A075B6K4 115 aa16.48■□□□□ 0.23
SSBP1-214ENST00000498107 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.48■□□□□ 0.23
SSBP1-214ENST00000498107 NPC1O15118 1278 aa16.48■□□□□ 0.23
SSBP1-214ENST00000498107 PI15O43692 258 aa16.48■□□□□ 0.23
SSBP1-214ENST00000498107 GGCXP38435 758 aa16.48■□□□□ 0.23
SSBP1-214ENST00000498107 NOP2P46087 812 aaKnown RBP16.48■□□□□ 0.23
SSBP1-214ENST00000498107 VAV2P52735 878 aa16.48■□□□□ 0.23
SSBP1-214ENST00000498107 HADHBP55084 474 aaKnown RBP16.48■□□□□ 0.23
SSBP1-214ENST00000498107 ZNF177Q13360 481 aaPredicted RBP16.48■□□□□ 0.23
SSBP1-214ENST00000498107 DMC1Q14565 340 aa16.48■□□□□ 0.23
SSBP1-214ENST00000498107 TRMT11Q7Z4G4 463 aaKnown RBP16.48■□□□□ 0.23
SSBP1-214ENST00000498107 C14orf80Q86SX3 495 aa16.48■□□□□ 0.23
SSBP1-214ENST00000498107 KIAA1328Q86T90 577 aa16.48■□□□□ 0.23
SSBP1-214ENST00000498107 LRRC8AQ8IWT6 810 aa16.48■□□□□ 0.23
SSBP1-214ENST00000498107 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.48■□□□□ 0.23
SSBP1-214ENST00000498107 TMEM105Q8N8V8 129 aa16.48■□□□□ 0.23
SSBP1-214ENST00000498107 IGSF8Q969P0 613 aa16.48■□□□□ 0.23
SSBP1-214ENST00000498107 ACDQ96AP0 544 aa16.48■□□□□ 0.23
SSBP1-214ENST00000498107 TBC1D31Q96DN5 1066 aa16.48■□□□□ 0.23
SSBP1-214ENST00000498107 P2RY11Q96G91 374 aa16.48■□□□□ 0.23
SSBP1-214ENST00000498107 BTBD6Q96KE9 485 aa16.48■□□□□ 0.23
SSBP1-214ENST00000498107 OSGEPQ9NPF4 335 aa16.48■□□□□ 0.23
SSBP1-214ENST00000498107 TMPRSS4Q9NRS4 437 aa16.48■□□□□ 0.23
SSBP1-214ENST00000498107 DONSONQ9NYP3 566 aa16.48■□□□□ 0.23
SSBP1-214ENST00000498107 DLGAP2Q9P1A6 1054 aa16.48■□□□□ 0.23
SSBP1-214ENST00000498107 PCSK1NQ9UHG2 260 aa16.48■□□□□ 0.23
SSBP1-214ENST00000498107 GGA2Q9UJY4 613 aa16.48■□□□□ 0.23
SSBP1-214ENST00000498107 AP4E1Q9UPM8 1137 aa16.48■□□□□ 0.23
SSBP1-214ENST00000498107 K7EQS6 105 aa16.47■□□□□ 0.23
SSBP1-214ENST00000498107 RNF40O75150 1001 aa16.47■□□□□ 0.23
SSBP1-214ENST00000498107 PABPC1P11940 636 aaKnown RBP16.47■□□□□ 0.23
SSBP1-214ENST00000498107 HLA-FP30511 346 aa16.47■□□□□ 0.23
SSBP1-214ENST00000498107 SLC1A1P43005 524 aa16.47■□□□□ 0.23
SSBP1-214ENST00000498107 SSR1P43307 286 aaKnown RBP16.47■□□□□ 0.23
SSBP1-214ENST00000498107 C6orf118Q5T5N4 469 aa16.47■□□□□ 0.23
SSBP1-214ENST00000498107 MAMSTRQ6ZN01 415 aa16.47■□□□□ 0.23
SSBP1-214ENST00000498107 ZNF683Q8IZ20 524 aa16.47■□□□□ 0.23
SSBP1-214ENST00000498107 SPEM1Q8N4L4 309 aa16.47■□□□□ 0.23
SSBP1-214ENST00000498107 ARFGAP1Q8N6T3 406 aa16.47■□□□□ 0.23
SSBP1-214ENST00000498107 TEKT4Q8WW24 435 aa16.47■□□□□ 0.23
SSBP1-214ENST00000498107 MYEOVQ96EZ4 313 aa16.47■□□□□ 0.23
SSBP1-214ENST00000498107 PRRX2Q99811 253 aa16.47■□□□□ 0.23
SSBP1-214ENST00000498107 DHX35Q9H5Z1 703 aaKnown RBP16.47■□□□□ 0.23
SSBP1-214ENST00000498107 RBM12Q9NTZ6 932 aaKnown RBP16.47■□□□□ 0.23
SSBP1-214ENST00000498107 ABCB8Q9NUT2 735 aa16.47■□□□□ 0.23
SSBP1-214ENST00000498107 CLEC4EQ9ULY5 219 aa16.47■□□□□ 0.23
SSBP1-214ENST00000498107 BTNL10A8MVZ5 291 aa16.46■□□□□ 0.23
SSBP1-214ENST00000498107 CHURC1-FNTBB4DL54 471 aa16.46■□□□□ 0.23
SSBP1-214ENST00000498107 TRIM24O15164 1050 aa16.46■□□□□ 0.23
SSBP1-214ENST00000498107 PJA2O43164 708 aa16.46■□□□□ 0.23
SSBP1-214ENST00000498107 LRIG2O94898 1065 aa16.46■□□□□ 0.23
SSBP1-214ENST00000498107 ATP5BP06576 529 aaKnown RBP16.46■□□□□ 0.23
SSBP1-214ENST00000498107 KRT7P08729 469 aa16.46■□□□□ 0.23
SSBP1-214ENST00000498107 RHOQP17081 205 aa16.46■□□□□ 0.23
SSBP1-214ENST00000498107 POLR2EP19388 210 aaKnown RBP16.46■□□□□ 0.23
SSBP1-214ENST00000498107 COL9A1P20849 921 aa16.46■□□□□ 0.23
SSBP1-214ENST00000498107 KIF5AQ12840 1032 aa16.46■□□□□ 0.23
SSBP1-214ENST00000498107 MESDQ14696 234 aa16.46■□□□□ 0.23
SSBP1-214ENST00000498107 IFI16Q16666 785 aaKnown RBP16.46■□□□□ 0.23
SSBP1-214ENST00000498107 MANEALQ5VSG8 457 aa16.46■□□□□ 0.23
SSBP1-214ENST00000498107 SDE2Q6IQ49 451 aa16.46■□□□□ 0.23
SSBP1-214ENST00000498107 RWDD4Q6NW29 188 aaKnown RBP16.46■□□□□ 0.23
SSBP1-214ENST00000498107 KIAA0907Q7Z7F0 614 aaPredicted RBP16.46■□□□□ 0.23
SSBP1-214ENST00000498107 SETD3Q86TU7 594 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms