RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 INO80DQ53TQ3 878 aaPredicted RBP3.56□□□□□ -1.84
RBM28-207ENST00000488249 ZNF569Q5MCW4 686 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 C10orf25Q5T742 122 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 ATPAF1Q5TC12 328 aaPredicted RBP3.56□□□□□ -1.84
RBM28-207ENST00000488249 PXDC1Q5TGL8 231 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 DHRS13Q6UX07 377 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 RHPN2Q8IUC4 686 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 NANOGP1Q8N7R0 232 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 ATG16L2Q8NAA4 619 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 VPS37AQ8NEZ2 397 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 OR1N1Q8NGS0 311 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 C16orf52Q8NHV5 167 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 WIPF2Q8TF74 440 aaPredicted RBP3.56□□□□□ -1.84
RBM28-207ENST00000488249 MECRQ9BV79 373 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 CCDC134Q9H6E4 229 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 PPCSQ9HAB8 311 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 ERVK-5Q9HDB9 667 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 MTMR4Q9NYA4 1195 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 HERC5Q9UII4 1024 aaKnown RBP3.56□□□□□ -1.84
RBM28-207ENST00000488249 SLC12A4Q9UP95 1085 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 CNTN6Q9UQ52 1028 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 ZBTB1Q9Y2K1 713 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 ZMYM2Q9UBW7 1377 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 BICDL2A1A5D9 508 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 DYTNA2CJ06 578 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 SLC38A8A6NNN8 435 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 CLGNO14967 610 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 PPP6R2O75170 966 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 CNOT3O75175 753 aaKnown RBP3.55□□□□□ -1.84
RBM28-207ENST00000488249 LARGE1O95461 756 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 CSTBP04080 98 aaKnown RBP3.55□□□□□ -1.84
RBM28-207ENST00000488249 CYP3A4P08684 503 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 PEPDP12955 493 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 GYS1P13807 737 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 AKR1A1P14550 325 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 TFEBP19484 476 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 SCP2P22307 547 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 PTGER1P34995 402 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 DEKP35659 375 aaKnown RBP3.55□□□□□ -1.84
RBM28-207ENST00000488249 TERF1P54274 439 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 POLE2P56282 527 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 SLC37A1P57057 533 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 FOXL2P58012 376 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 RBM6P78332 1123 aaKnown RBP3.55□□□□□ -1.84
RBM28-207ENST00000488249 SF3A3Q12874 501 aaKnown RBP eCLIP3.55□□□□□ -1.841e-6■■■■■ 41.9
RBM28-207ENST00000488249 RBMS2Q15434 407 aaKnown RBP3.55□□□□□ -1.84
RBM28-207ENST00000488249 SHC4Q6S5L8 630 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 ZNF474Q6S9Z5 364 aaPredicted RBP3.55□□□□□ -1.84
RBM28-207ENST00000488249 SLC39A5Q6ZMH5 540 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 FAM57BQ71RH2 274 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 MRPL10Q7Z7H8 261 aaKnown RBP3.55□□□□□ -1.84
RBM28-207ENST00000488249 ADPRHL1Q8NDY3 354 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 MYRIPQ8NFW9 859 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 SCARB1Q8WTV0 552 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 KAT2BQ92831 832 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 RMDN3Q96TC7 470 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 RTKNQ9BST9 563 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 ABHD14AQ9BUJ0 271 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 SCNM1Q9BWG6 230 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 MOV10Q9HCE1 1003 aaKnown RBP3.55□□□□□ -1.84
RBM28-207ENST00000488249 DACT1Q9NYF0 836 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 ELOVL5Q9NYP7 299 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 LRFN1Q9P244 771 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 RAB21Q9UL25 225 aa3.55□□□□□ -1.84
RBM28-207ENST00000488249 TRPC5Q9UL62 973 aaPredicted RBP3.55□□□□□ -1.84
RBM28-207ENST00000488249 ZNF521Q96K83 1311 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 CYP3A7-CYP3A51PA0A087WV96 503 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 TBC1D3DA0A087WVF3 549 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 TBC1D3IA0A087WXS9 549 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 TBC1D3EA0A087X179 549 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 TBC1D3KA0A087X1G2 549 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 TBC1D3BA6NDS4 549 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 TBC1D3FA6NER0 549 aaPredicted RBP3.54□□□□□ -1.84
RBM28-207ENST00000488249 C3orf70A6NLC5 250 aaPredicted RBP3.54□□□□□ -1.84
RBM28-207ENST00000488249 EFCAB8A8MWE9 144 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 TBC1D3LB9A6J9 549 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 ACKR2O00590 384 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 TRIM38O00635 465 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 CNTN5O94779 1100 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 ACTL6BO94805 426 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 ALDOAP04075 364 aaKnown RBP3.54□□□□□ -1.84
RBM28-207ENST00000488249 TBC1D3HP0C7X1 549 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 CYP19A1P11511 503 aaPredicted RBP3.54□□□□□ -1.84
RBM28-207ENST00000488249 IGFBP2P18065 325 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 TGM2P21980 687 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 CYP3A7P24462 503 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 GRK5P34947 590 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 CDK7P50613 346 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 FAM3BP58499 235 aaPredicted RBP3.54□□□□□ -1.84
RBM28-207ENST00000488249 TAS2R50P59544 299 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 AP2B1P63010 937 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 BLMHQ13867 455 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 CCDC38Q502W7 563 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 C1QTNF12Q5T7M4 302 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 LIPMQ5VYY2 423 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 TBC1D3GQ6DHY5 549 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 TBC1D3CQ6IPX1 549 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 NFRKBQ6P4R8 1299 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 TMEM88Q6PEY1 159 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 KLHL17Q6TDP4 642 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms