RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 DHX16O60231 1041 aaKnown RBP4.94□□□□□ -1.62
VPS13A-211ENST00000484581 VNN1O95497 513 aa4.94□□□□□ -1.62
VPS13A-211ENST00000484581 CYP3A4P08684 503 aa4.94□□□□□ -1.62
VPS13A-211ENST00000484581 ALADP13716 330 aa4.94□□□□□ -1.62
VPS13A-211ENST00000484581 PPP3CBP16298 524 aa4.94□□□□□ -1.62
VPS13A-211ENST00000484581 NR4A1P22736 598 aa4.94□□□□□ -1.62
VPS13A-211ENST00000484581 PRKCHP24723 683 aa4.94□□□□□ -1.62
VPS13A-211ENST00000484581 HARS2P49590 506 aaKnown RBP4.94□□□□□ -1.62
VPS13A-211ENST00000484581 MRPS21P82921 87 aaKnown RBP4.94□□□□□ -1.62
VPS13A-211ENST00000484581 TAP1Q03518 808 aa4.94□□□□□ -1.62
VPS13A-211ENST00000484581 ACVR2BQ13705 512 aa4.94□□□□□ -1.62
VPS13A-211ENST00000484581 SPDYE7PQ495Y7 208 aa4.94□□□□□ -1.62
VPS13A-211ENST00000484581 STRIP1Q5VSL9 837 aa4.94□□□□□ -1.62
VPS13A-211ENST00000484581 C16orf89Q6UX73 402 aa4.94□□□□□ -1.62
VPS13A-211ENST00000484581 P3H2Q8IVL5 708 aa4.94□□□□□ -1.62
VPS13A-211ENST00000484581 ZNF366Q8N895 744 aa4.94□□□□□ -1.62
VPS13A-211ENST00000484581 RFWD2Q8NHY2 731 aa4.94□□□□□ -1.62
VPS13A-211ENST00000484581 ETNPPLQ8TBG4 499 aa4.94□□□□□ -1.62
VPS13A-211ENST00000484581 SH3KBP1Q96B97 665 aa4.94□□□□□ -1.62
VPS13A-211ENST00000484581 NACC2Q96BF6 587 aa4.94□□□□□ -1.62
VPS13A-211ENST00000484581 ELP4Q96EB1 424 aa4.94□□□□□ -1.62
VPS13A-211ENST00000484581 LENG8Q96PV6 779 aaPredicted RBP4.94□□□□□ -1.62
VPS13A-211ENST00000484581 AP1M1Q9BXS5 423 aa4.94□□□□□ -1.62
VPS13A-211ENST00000484581 TEX101Q9BY14 249 aa4.94□□□□□ -1.62
VPS13A-211ENST00000484581 MUC13Q9H3R2 512 aa4.94□□□□□ -1.62
VPS13A-211ENST00000484581 GALNT9Q9HCQ5 603 aa4.94□□□□□ -1.62
VPS13A-211ENST00000484581 EIF2B3Q9NR50 452 aaKnown RBP4.94□□□□□ -1.62
VPS13A-211ENST00000484581 ZDHHC7Q9NXF8 308 aa4.94□□□□□ -1.62
VPS13A-211ENST00000484581 PTGFRNQ9P2B2 879 aa4.94□□□□□ -1.62
VPS13A-211ENST00000484581 CD207Q9UJ71 328 aa4.94□□□□□ -1.62
VPS13A-211ENST00000484581 NOL7Q9UMY1 257 aaKnown RBP4.94□□□□□ -1.62
VPS13A-211ENST00000484581 CCDC187A0A096LP49 1063 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 GAGE12BA1L429 117 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 A1L4Q6 167 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 SYNDIG1LA6NDD5 238 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 GAGE12HA6NDE8 117 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 FAM90A7PA6NKC0 464 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 FAM90A22PA8MWA6 464 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 FAM90A12PA8MX19 464 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 FAM90A23PA8MXZ1 464 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 TMEM232C9JQI7 657 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 AP3D1O14617 1153 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 CCNDBP1O95273 360 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 STARD3NLO95772 234 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 UBL4AP11441 157 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 PORP16435 677 aaPredicted RBP4.93□□□□□ -1.62
VPS13A-211ENST00000484581 GATA3P23771 443 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 ADRA1DP25100 572 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 MAPK4P31152 587 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 MCM5P33992 734 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 LIPAP38571 399 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 RGS2P41220 211 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 RARSP54136 660 aaKnown RBP4.93□□□□□ -1.62
VPS13A-211ENST00000484581 TAS2R50P59544 299 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 GOLGA8FQ08AF8 430 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 WTAPQ15007 396 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 RILPL1Q5EBL4 403 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 MFSD4BQ5TF39 518 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 HECTD2Q5U5R9 776 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 WDR93Q6P2C0 686 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 ACSM6Q6P461 480 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 SLC22A25Q6T423 547 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 KLHL24Q6TFL4 600 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 ANKRD23Q86SG2 305 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 B3GALNT2Q8NCR0 500 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 KCNG4Q8TDN1 519 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 GLMPQ8WWB7 406 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 ASB2Q96Q27 587 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 NR1H4Q96RI1 486 aaPredicted RBP4.93□□□□□ -1.62
VPS13A-211ENST00000484581 RSF1Q96T23 1441 aaPredicted RBP4.93□□□□□ -1.62
VPS13A-211ENST00000484581 CD180Q99467 661 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 DPCDQ9BVM2 203 aaPredicted RBP4.93□□□□□ -1.62
VPS13A-211ENST00000484581 ALOXE3Q9BYJ1 711 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 CLPBQ9H078 707 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 TOR3AQ9H497 397 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 MROH8Q9H579 483 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 SEMA4BQ9NPR2 832 aaPredicted RBP4.93□□□□□ -1.62
VPS13A-211ENST00000484581 ALKBH4Q9NXW9 302 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 HCN3Q9P1Z3 774 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 ADD3Q9UEY8 706 aaKnown RBP4.93□□□□□ -1.62
VPS13A-211ENST00000484581 SARDHQ9UL12 918 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 SLC12A4Q9UP95 1085 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 PSAT1Q9Y617 370 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 PIAS3Q9Y6X2 628 aa4.93□□□□□ -1.62
VPS13A-211ENST00000484581 NPIPB15A6NHN6 443 aaPredicted RBP4.92□□□□□ -1.62
VPS13A-211ENST00000484581 AHRRA9YTQ3 701 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 GRM8O00222 908 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 RNASET2O00584 256 aaKnown RBP4.92□□□□□ -1.62
VPS13A-211ENST00000484581 TNFSF14O43557 240 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 SPRY2O43597 315 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 METTL18O95568 372 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 ALDOAP04075 364 aaKnown RBP4.92□□□□□ -1.62
VPS13A-211ENST00000484581 ERBB2P04626 1255 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 RPN1P04843 607 aaKnown RBP4.92□□□□□ -1.62
VPS13A-211ENST00000484581 PDHA1P08559 390 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 MATN1P21941 496 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 GKP32189 559 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 ACTN2P35609 894 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 BSGP35613 385 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 IGHMBP2P38935 993 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms