RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 ATP2A3Q93084 1043 aa14.1□□□□□ -0.15
NPHP4-207ENST00000470763 ATXN7L3BQ96GX2 97 aa14.1□□□□□ -0.15
NPHP4-207ENST00000470763 EBNA1BP2Q99848 306 aaKnown RBP14.1□□□□□ -0.15
NPHP4-207ENST00000470763 CORO1BQ9BR76 489 aa14.1□□□□□ -0.15
NPHP4-207ENST00000470763 SDCBP2Q9H190 292 aa14.1□□□□□ -0.15
NPHP4-207ENST00000470763 RSAD1Q9HA92 442 aa14.1□□□□□ -0.15
NPHP4-207ENST00000470763 XPNPEP3Q9NQH7 507 aa14.1□□□□□ -0.15
NPHP4-207ENST00000470763 GPATCH2LQ9NWQ4 482 aa14.1□□□□□ -0.15
NPHP4-207ENST00000470763 CCPG1Q9ULG6 757 aa14.1□□□□□ -0.15
NPHP4-207ENST00000470763 CDC14AQ9UNH5 594 aa14.1□□□□□ -0.15
NPHP4-207ENST00000470763 ENTPD3O75355 529 aa14.1□□□□□ -0.15
NPHP4-207ENST00000470763 MYL6P60660 151 aa14.1□□□□□ -0.15
NPHP4-207ENST00000470763 PRAMEP78395 509 aa14.1□□□□□ -0.15
NPHP4-207ENST00000470763 CREB5Q02930 508 aa14.1□□□□□ -0.15
NPHP4-207ENST00000470763 ATP1A4Q13733 1029 aa14.1□□□□□ -0.15
NPHP4-207ENST00000470763 OGFOD2Q6N063 350 aa14.1□□□□□ -0.15
NPHP4-207ENST00000470763 C16orf89Q6UX73 402 aa14.1□□□□□ -0.15
NPHP4-207ENST00000470763 NAPRTQ6XQN6 538 aa14.1□□□□□ -0.15
NPHP4-207ENST00000470763 TMA16Q96EY4 203 aaKnown RBP14.1□□□□□ -0.15
NPHP4-207ENST00000470763 CPXM1Q96SM3 734 aa14.1□□□□□ -0.15
NPHP4-207ENST00000470763 MSTO1Q9BUK6 570 aa14.1□□□□□ -0.15
NPHP4-207ENST00000470763 INO80BQ9C086 356 aaPredicted RBP14.1□□□□□ -0.15
NPHP4-207ENST00000470763 TCF7L2Q9NQB0 619 aa14.1□□□□□ -0.15
NPHP4-207ENST00000470763 ZNHIT2Q9UHR6 403 aa14.1□□□□□ -0.15
NPHP4-207ENST00000470763 PRPF19Q9UMS4 504 aaKnown RBP14.1□□□□□ -0.15
NPHP4-207ENST00000470763 MYRFQ9Y2G1 1151 aa14.1□□□□□ -0.15
NPHP4-207ENST00000470763 TESPA1A2RU30 521 aaPredicted RBP14.09□□□□□ -0.15
NPHP4-207ENST00000470763 CBFA2T3O75081 653 aa14.09□□□□□ -0.15
NPHP4-207ENST00000470763 METTL18O95568 372 aa14.09□□□□□ -0.15
NPHP4-207ENST00000470763 TRUB2O95900 331 aaKnown RBP14.09□□□□□ -0.15
NPHP4-207ENST00000470763 GRK2P25098 689 aa14.09□□□□□ -0.15
NPHP4-207ENST00000470763 HOXD12P35452 270 aa14.09□□□□□ -0.15
NPHP4-207ENST00000470763 NUP107P57740 925 aa14.09□□□□□ -0.15
NPHP4-207ENST00000470763 EPGNQ6UW88 154 aa14.09□□□□□ -0.15
NPHP4-207ENST00000470763 CPXCR1Q8N123 301 aa14.09□□□□□ -0.15
NPHP4-207ENST00000470763 C12orf43Q96C57 262 aaKnown RBP14.09□□□□□ -0.15
NPHP4-207ENST00000470763 RMND5BQ96G75 393 aaPredicted RBP14.09□□□□□ -0.15
NPHP4-207ENST00000470763 POLR3FQ9H1D9 316 aaPredicted RBP14.09□□□□□ -0.15
NPHP4-207ENST00000470763 ANKEF1Q9NU02 776 aa14.09□□□□□ -0.15
NPHP4-207ENST00000470763 GABBR1Q9UBS5 961 aa14.09□□□□□ -0.15
NPHP4-207ENST00000470763 COQ6Q9Y2Z9 468 aa14.09□□□□□ -0.15
NPHP4-207ENST00000470763 NR2E3Q9Y5X4 410 aa14.09□□□□□ -0.15
NPHP4-207ENST00000470763 WDR27A2RRH5 827 aa14.09□□□□□ -0.15
NPHP4-207ENST00000470763 PRDX6P30041 224 aa14.09□□□□□ -0.15
NPHP4-207ENST00000470763 TMEM198Q66K66 360 aa14.09□□□□□ -0.15
NPHP4-207ENST00000470763 SLC9A4Q6AI14 798 aa14.09□□□□□ -0.15
NPHP4-207ENST00000470763 DHRS4L2Q6PKH6 230 aa14.09□□□□□ -0.15
NPHP4-207ENST00000470763 CMC1Q7Z7K0 106 aa14.09□□□□□ -0.15
NPHP4-207ENST00000470763 SP8Q8IXZ3 490 aa14.09□□□□□ -0.15
NPHP4-207ENST00000470763 SLC15A3Q8IY34 581 aa14.09□□□□□ -0.15
NPHP4-207ENST00000470763 ISOC1Q96CN7 298 aa14.09□□□□□ -0.15
NPHP4-207ENST00000470763 ZDHHC15Q96MV8 337 aa14.09□□□□□ -0.15
NPHP4-207ENST00000470763 TARS2Q9BW92 718 aaKnown RBP14.09□□□□□ -0.15
NPHP4-207ENST00000470763 CDH19Q9H159 772 aa14.09□□□□□ -0.15
NPHP4-207ENST00000470763 FAM96AQ9H5X1 160 aa14.09□□□□□ -0.15
NPHP4-207ENST00000470763 TDRD3Q9H7E2 651 aaKnown RBP14.09□□□□□ -0.15
NPHP4-207ENST00000470763 TBC1D23Q9NUY8 699 aa14.09□□□□□ -0.15
NPHP4-207ENST00000470763 OLAHQ9NV23 265 aa14.09□□□□□ -0.15
NPHP4-207ENST00000470763 SLC38A7Q9NVC3 462 aa14.09□□□□□ -0.15
NPHP4-207ENST00000470763 FUOMA2VDF0 154 aa14.08□□□□□ -0.15
NPHP4-207ENST00000470763 H3BNH8 94 aa14.08□□□□□ -0.15
NPHP4-207ENST00000470763 HMGCRP04035 888 aa14.08□□□□□ -0.15
NPHP4-207ENST00000470763 OCM2P0CE71 109 aa14.08□□□□□ -0.15
NPHP4-207ENST00000470763 OCMP0CE72 109 aaPredicted RBP14.08□□□□□ -0.15
NPHP4-207ENST00000470763 BSPRYQ5W0U4 402 aa14.08□□□□□ -0.15
NPHP4-207ENST00000470763 XKR5Q6UX68 686 aa14.08□□□□□ -0.15
NPHP4-207ENST00000470763 DQX1Q8TE96 717 aaKnown RBP14.08□□□□□ -0.15
NPHP4-207ENST00000470763 LRTOMTQ8WZ04 291 aa14.08□□□□□ -0.15
NPHP4-207ENST00000470763 COX4I2Q96KJ9 171 aa14.08□□□□□ -0.15
NPHP4-207ENST00000470763 CGRRF1Q99675 332 aa14.08□□□□□ -0.15
NPHP4-207ENST00000470763 FERMT1Q9BQL6 677 aa14.08□□□□□ -0.15
NPHP4-207ENST00000470763 MTMR12Q9C0I1 747 aa14.08□□□□□ -0.15
NPHP4-207ENST00000470763 WDR41Q9HAD4 459 aa14.08□□□□□ -0.15
NPHP4-207ENST00000470763 SEPT9Q9UHD8 586 aaPredicted RBP14.08□□□□□ -0.15
NPHP4-207ENST00000470763 PCDHA11Q9Y5I1 949 aa14.08□□□□□ -0.15
NPHP4-207ENST00000470763 UBIAD1Q9Y5Z9 338 aa14.08□□□□□ -0.15
NPHP4-207ENST00000470763 LRRC37AA6NMS7 1700 aa14.08□□□□□ -0.16
NPHP4-207ENST00000470763 ARID2Q68CP9 1835 aa14.08□□□□□ -0.16
NPHP4-207ENST00000470763 TMEM247A6NEH6 219 aa14.08□□□□□ -0.16
NPHP4-207ENST00000470763 PSMD12O00232 456 aaPredicted RBP14.08□□□□□ -0.16
NPHP4-207ENST00000470763 ADAM23O75077 832 aa14.08□□□□□ -0.16
NPHP4-207ENST00000470763 CPA3P15088 417 aa14.08□□□□□ -0.16
NPHP4-207ENST00000470763 ME2P23368 584 aa14.08□□□□□ -0.16
NPHP4-207ENST00000470763 HARS2P49590 506 aaKnown RBP14.08□□□□□ -0.16
NPHP4-207ENST00000470763 TMEM53Q6P2H8 277 aa14.08□□□□□ -0.16
NPHP4-207ENST00000470763 TIFABQ6ZNK6 161 aa14.08□□□□□ -0.16
NPHP4-207ENST00000470763 TMEM126BQ8IUX1 230 aa14.08□□□□□ -0.16
NPHP4-207ENST00000470763 PQLC3Q8N755 202 aa14.08□□□□□ -0.16
NPHP4-207ENST00000470763 CHURC1Q8WUH1 139 aa14.08□□□□□ -0.16
NPHP4-207ENST00000470763 ACO2Q99798 780 aaKnown RBP14.08□□□□□ -0.16
NPHP4-207ENST00000470763 SLC29A1Q99808 456 aa14.08□□□□□ -0.16
NPHP4-207ENST00000470763 CIB1Q99828 191 aa14.08□□□□□ -0.16
NPHP4-207ENST00000470763 RGSL1A5PLK6 1076 aa14.08□□□□□ -0.16
NPHP4-207ENST00000470763 ERBB2P04626 1255 aa14.08□□□□□ -0.16
NPHP4-207ENST00000470763 TYK2P29597 1187 aa14.08□□□□□ -0.16
NPHP4-207ENST00000470763 CCR10P46092 362 aa14.08□□□□□ -0.16
NPHP4-207ENST00000470763 FSTL1Q12841 308 aa14.08□□□□□ -0.16
NPHP4-207ENST00000470763 C15orf59Q2T9L4 293 aaPredicted RBP14.08□□□□□ -0.16
NPHP4-207ENST00000470763 DCAF6Q58WW2 860 aa14.08□□□□□ -0.16
NPHP4-207ENST00000470763 GPR141Q7Z602 305 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms