RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 CSKP41240 450 aa19.57■□□□□ 0.72
COL5A1-203ENST00000460264 MYL5Q02045 173 aa19.57■□□□□ 0.72
COL5A1-203ENST00000460264 CCDC183Q5T5S1 534 aa19.57■□□□□ 0.72
COL5A1-203ENST00000460264 OTUD1Q5VV17 481 aaPredicted RBP19.57■□□□□ 0.72
COL5A1-203ENST00000460264 SLC23A3Q6PIS1 610 aa19.57■□□□□ 0.72
COL5A1-203ENST00000460264 MMS22LQ6ZRQ5 1243 aa19.57■□□□□ 0.72
COL5A1-203ENST00000460264 CCDC117Q8IWD4 279 aaPredicted RBP19.57■□□□□ 0.72
COL5A1-203ENST00000460264 TTC17Q96AE7 1141 aa19.57■□□□□ 0.72
COL5A1-203ENST00000460264 TOE1Q96GM8 510 aaKnown RBP19.57■□□□□ 0.72
COL5A1-203ENST00000460264 ZNF419Q96HQ0 510 aaPredicted RBP19.57■□□□□ 0.72
COL5A1-203ENST00000460264 NUSAP1Q9BXS6 441 aaKnown RBP19.57■□□□□ 0.72
COL5A1-203ENST00000460264 TMEM9BQ9NQ34 198 aa19.57■□□□□ 0.72
COL5A1-203ENST00000460264 WSB2Q9NYS7 404 aaPredicted RBP19.57■□□□□ 0.72
COL5A1-203ENST00000460264 SLC12A6Q9UHW9 1150 aa19.57■□□□□ 0.72
COL5A1-203ENST00000460264 CACNA1EQ15878 2313 aa19.57■□□□□ 0.72
COL5A1-203ENST00000460264 NUMA1Q14980 2115 aa19.57■□□□□ 0.72
COL5A1-203ENST00000460264 CDX4O14627 284 aaPredicted RBP19.56■□□□□ 0.72
COL5A1-203ENST00000460264 LSM8O95777 96 aaKnown RBP19.56■□□□□ 0.72
COL5A1-203ENST00000460264 ASLP04424 464 aa19.56■□□□□ 0.72
COL5A1-203ENST00000460264 CFIP05156 583 aa19.56■□□□□ 0.72
COL5A1-203ENST00000460264 TPM2P07951 284 aa19.56■□□□□ 0.72
COL5A1-203ENST00000460264 C7P10643 843 aa19.56■□□□□ 0.72
COL5A1-203ENST00000460264 ABCB4P21439 1286 aa19.56■□□□□ 0.72
COL5A1-203ENST00000460264 NOS2P35228 1153 aa19.56■□□□□ 0.72
COL5A1-203ENST00000460264 MATKP42679 507 aa19.56■□□□□ 0.72
COL5A1-203ENST00000460264 GABRB2P47870 512 aa19.56■□□□□ 0.72
COL5A1-203ENST00000460264 NME3Q13232 169 aa19.56■□□□□ 0.72
COL5A1-203ENST00000460264 DUOXA1Q1HG43 343 aa19.56■□□□□ 0.72
COL5A1-203ENST00000460264 PITRM1Q5JRX3 1037 aa19.56■□□□□ 0.72
COL5A1-203ENST00000460264 FKBP15Q5T1M5 1219 aa19.56■□□□□ 0.72
COL5A1-203ENST00000460264 FOXJ1Q92949 421 aa19.56■□□□□ 0.72
COL5A1-203ENST00000460264 RNF34Q969K3 372 aa19.56■□□□□ 0.72
COL5A1-203ENST00000460264 MYO19Q96H55 970 aa19.56■□□□□ 0.72
COL5A1-203ENST00000460264 ADAM33Q9BZ11 813 aa19.56■□□□□ 0.72
COL5A1-203ENST00000460264 FBRSQ9HAH7 460 aa19.56■□□□□ 0.72
COL5A1-203ENST00000460264 PRSS16Q9NQE7 514 aa19.56■□□□□ 0.72
COL5A1-203ENST00000460264 FAM207AQ9NSI2 230 aaPredicted RBP19.56■□□□□ 0.72
COL5A1-203ENST00000460264 ASCC3Q8N3C0 2202 aaKnown RBP19.56■□□□□ 0.72
COL5A1-203ENST00000460264 FAM170AA1A519 330 aa19.55■□□□□ 0.72
COL5A1-203ENST00000460264 H0Y626 953 aa19.55■□□□□ 0.72
COL5A1-203ENST00000460264 M0QYT0 321 aa19.55■□□□□ 0.72
COL5A1-203ENST00000460264 EPHB6O15197 1021 aa19.55■□□□□ 0.72
COL5A1-203ENST00000460264 MMEP08473 750 aa19.55■□□□□ 0.72
COL5A1-203ENST00000460264 ACADMP11310 421 aa19.55■□□□□ 0.72
COL5A1-203ENST00000460264 KCNA4P22459 653 aa19.55■□□□□ 0.72
COL5A1-203ENST00000460264 SCNN1AP37088 669 aa19.55■□□□□ 0.72
COL5A1-203ENST00000460264 COPB1P53618 953 aaKnown RBP19.55■□□□□ 0.72
COL5A1-203ENST00000460264 TTC39BQ5VTQ0 682 aaPredicted RBP19.55■□□□□ 0.72
COL5A1-203ENST00000460264 RABEPKQ7Z6M1 372 aa19.55■□□□□ 0.72
COL5A1-203ENST00000460264 CIR1Q86X95 450 aaPredicted RBP19.55■□□□□ 0.72
COL5A1-203ENST00000460264 XYLT1Q86Y38 959 aa19.55■□□□□ 0.72
COL5A1-203ENST00000460264 CEP76Q8TAP6 659 aa19.55■□□□□ 0.72
COL5A1-203ENST00000460264 C18orf8Q96DM3 657 aa19.55■□□□□ 0.72
COL5A1-203ENST00000460264 MRGPRX3Q96LB0 322 aa19.55■□□□□ 0.72
COL5A1-203ENST00000460264 NPY6RQ99463 290 aa19.55■□□□□ 0.72
COL5A1-203ENST00000460264 GPR174Q9BXC1 333 aa19.55■□□□□ 0.72
COL5A1-203ENST00000460264 RRN3Q9NYV6 651 aa19.55■□□□□ 0.72
COL5A1-203ENST00000460264 KIAA1522Q9P206 1035 aaPredicted RBP19.55■□□□□ 0.72
COL5A1-203ENST00000460264 LIMA1Q9UHB6 759 aaKnown RBP19.55■□□□□ 0.72
COL5A1-203ENST00000460264 NOCTQ9UK39 431 aaKnown RBP19.55■□□□□ 0.72
COL5A1-203ENST00000460264 SIK3Q9Y2K2 1263 aa19.55■□□□□ 0.72
COL5A1-203ENST00000460264 LGALS16A8MUM7 142 aa19.54■□□□□ 0.72
COL5A1-203ENST00000460264 GFPT2O94808 682 aa19.54■□□□□ 0.72
COL5A1-203ENST00000460264 ADRB1P08588 477 aa19.54■□□□□ 0.72
COL5A1-203ENST00000460264 SERPINF2P08697 491 aa19.54■□□□□ 0.72
COL5A1-203ENST00000460264 ENGP17813 658 aa19.54■□□□□ 0.72
COL5A1-203ENST00000460264 TFE3P19532 575 aaPredicted RBP19.54■□□□□ 0.72
COL5A1-203ENST00000460264 OXTRP30559 389 aa19.54■□□□□ 0.72
COL5A1-203ENST00000460264 JAM2P57087 298 aa19.54■□□□□ 0.72
COL5A1-203ENST00000460264 POLR2FP61218 127 aaKnown RBP19.54■□□□□ 0.72
COL5A1-203ENST00000460264 NOMO3P69849 1222 aa19.54■□□□□ 0.72
COL5A1-203ENST00000460264 CENPCQ03188 943 aa19.54■□□□□ 0.72
COL5A1-203ENST00000460264 MTA1Q13330 715 aa19.54■□□□□ 0.72
COL5A1-203ENST00000460264 RABGAP1LQ5R372 815 aa19.54■□□□□ 0.72
COL5A1-203ENST00000460264 FAM102AQ5T9C2 384 aaPredicted RBP19.54■□□□□ 0.72
COL5A1-203ENST00000460264 DAB2IPQ5VWQ8 1189 aa19.54■□□□□ 0.72
COL5A1-203ENST00000460264 FBXL22Q6P050 247 aa19.54■□□□□ 0.72
COL5A1-203ENST00000460264 ERICH1Q86X53 443 aa19.54■□□□□ 0.72
COL5A1-203ENST00000460264 CCAR2Q8N163 923 aaKnown RBP19.54■□□□□ 0.72
COL5A1-203ENST00000460264 SLC20A1Q8WUM9 679 aa19.54■□□□□ 0.72
COL5A1-203ENST00000460264 CAPN10Q9HC96 672 aa19.54■□□□□ 0.72
COL5A1-203ENST00000460264 FSCN3Q9NQT6 498 aa19.54■□□□□ 0.72
COL5A1-203ENST00000460264 PIGVQ9NUD9 493 aa19.54■□□□□ 0.72
COL5A1-203ENST00000460264 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.54■□□□□ 0.72
COL5A1-203ENST00000460264 SLC6A14Q9UN76 642 aa19.54■□□□□ 0.72
COL5A1-203ENST00000460264 A0A1B0GVM2 712 aa19.53■□□□□ 0.72
COL5A1-203ENST00000460264 TCAF2A6NFQ2 919 aa19.53■□□□□ 0.72
COL5A1-203ENST00000460264 MOCS3O95396 460 aa19.53■□□□□ 0.72
COL5A1-203ENST00000460264 ZNF18P17022 549 aa19.53■□□□□ 0.72
COL5A1-203ENST00000460264 CTSOP43234 321 aaPredicted RBP19.53■□□□□ 0.72
COL5A1-203ENST00000460264 MAPK8P45983 427 aa19.53■□□□□ 0.72
COL5A1-203ENST00000460264 RNASE9P60153 205 aaKnown RBP19.53■□□□□ 0.72
COL5A1-203ENST00000460264 ST8SIA6P61647 398 aa19.53■□□□□ 0.72
COL5A1-203ENST00000460264 RPS14P62263 151 aaKnown RBP19.53■□□□□ 0.72
COL5A1-203ENST00000460264 AUHQ13825 339 aaKnown RBP19.53■□□□□ 0.72
COL5A1-203ENST00000460264 ARID5BQ14865 1188 aa19.53■□□□□ 0.72
COL5A1-203ENST00000460264 NCAPHQ15003 741 aa19.53■□□□□ 0.72
COL5A1-203ENST00000460264 HNRNPA1L2Q32P51 320 aaKnown RBP19.53■□□□□ 0.72
COL5A1-203ENST00000460264 PLEKHG6Q3KR16 790 aa19.53■□□□□ 0.72
COL5A1-203ENST00000460264 C2CD6Q53TS8 623 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms