RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 PACS1Q6VY07 963 aa10.71□□□□□ -0.69
CPNE1-218ENST00000439806 TIFABQ6ZNK6 161 aa10.71□□□□□ -0.69
CPNE1-218ENST00000439806 SH2D5Q6ZV89 423 aa10.71□□□□□ -0.69
CPNE1-218ENST00000439806 PAXIP1Q6ZW49 1069 aaPredicted RBP10.71□□□□□ -0.69
CPNE1-218ENST00000439806 CYS1Q717R9 158 aa10.71□□□□□ -0.69
CPNE1-218ENST00000439806 CTU1Q7Z7A3 348 aaKnown RBP10.71□□□□□ -0.69
CPNE1-218ENST00000439806 TAC4Q86UU9 113 aa10.71□□□□□ -0.69
CPNE1-218ENST00000439806 FAM72BQ86X60 149 aa10.71□□□□□ -0.69
CPNE1-218ENST00000439806 SPATA2LQ8IUW3 424 aaPredicted RBP10.71□□□□□ -0.69
CPNE1-218ENST00000439806 PCSK9Q8NBP7 692 aaKnown RBP10.71□□□□□ -0.69
CPNE1-218ENST00000439806 ARMC2Q8NEN0 867 aa10.71□□□□□ -0.69
CPNE1-218ENST00000439806 RFWD2Q8NHY2 731 aa10.71□□□□□ -0.69
CPNE1-218ENST00000439806 HDAC11Q96DB2 347 aa10.71□□□□□ -0.69
CPNE1-218ENST00000439806 RTP3Q9BQQ7 232 aa10.71□□□□□ -0.69
CPNE1-218ENST00000439806 TRIM56Q9BRZ2 755 aaKnown RBP10.71□□□□□ -0.69
CPNE1-218ENST00000439806 SLC13A1Q9BZW2 595 aa10.71□□□□□ -0.69
CPNE1-218ENST00000439806 TKTL2Q9H0I9 626 aa10.71□□□□□ -0.69
CPNE1-218ENST00000439806 MOCS1Q9NZB8 636 aa10.71□□□□□ -0.69
CPNE1-218ENST00000439806 TXNDC16Q9P2K2 825 aa10.71□□□□□ -0.69
CPNE1-218ENST00000439806 BAIAP2L1Q9UHR4 511 aa10.71□□□□□ -0.69
CPNE1-218ENST00000439806 ABT1Q9ULW3 272 aaKnown RBP10.71□□□□□ -0.69
CPNE1-218ENST00000439806 PLLPQ9Y342 182 aa10.71□□□□□ -0.69
CPNE1-218ENST00000439806 SNX10Q9Y5X0 201 aa10.71□□□□□ -0.69
CPNE1-218ENST00000439806 TLL2Q9Y6L7 1015 aa10.71□□□□□ -0.69
CPNE1-218ENST00000439806 COL4A4P53420 1690 aaPredicted RBP10.7□□□□□ -0.7
CPNE1-218ENST00000439806 CCDC195A0A1B0GUA6 201 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 M0QZQ0 153 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 KCNK1O00180 336 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 KLF11O14901 512 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 GLRA3O75311 464 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 ALDH1A2O94788 518 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 UNC5CO95185 931 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 TGDSO95455 350 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 ATP6V1G2O95670 118 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 IL1BP01584 269 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 POLBP06746 335 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 CCNB1P14635 433 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 TYMPP19971 482 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 YY1P25490 414 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 CST5P28325 142 aaPredicted RBP10.7□□□□□ -0.7
CPNE1-218ENST00000439806 EPHB2P29323 1055 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 CCND3P30281 292 aaPredicted RBP10.7□□□□□ -0.7
CPNE1-218ENST00000439806 TM4SF4P48230 202 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 RASSF2P50749 326 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 CRADDP78560 199 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 TMPRSS15P98073 1019 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 PRKCZQ05513 592 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 ZBTB16Q05516 673 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 NIPAL4Q0D2K0 466 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 GALNT2Q10471 571 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 CRYMQ14894 314 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 FAM26DQ5JW98 314 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 SPDYAQ5MJ70 313 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 BTBD8Q5XKL5 378 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 ICE2Q659A1 982 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 PM20D1Q6GTS8 502 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 DCLRE1AQ6PJP8 1040 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 C4orf50Q6ZRC1 276 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 BHLHA9Q7RTU4 235 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 NUDCD3Q8IVD9 361 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 TP53INP2Q8IXH6 220 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 NDUFAF2Q8N183 169 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 KIF2BQ8N4N8 673 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 ZNF276Q8N554 614 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 ANKLE1Q8NAG6 615 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 STKLD1Q8NE28 680 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 KLHDC9Q8NEP7 349 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 OR52K1Q8NGK4 314 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 ACMSDQ8TDX5 336 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 DQX1Q8TE96 717 aaKnown RBP10.7□□□□□ -0.7
CPNE1-218ENST00000439806 RSPH1Q8WYR4 309 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 E2F7Q96AV8 911 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 ZNF669Q96BR6 464 aaPredicted RBP10.7□□□□□ -0.7
CPNE1-218ENST00000439806 OXNAD1Q96HP4 312 aaPredicted RBP10.7□□□□□ -0.7
CPNE1-218ENST00000439806 SUSD3Q96L08 255 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 AGAP3Q96P47 875 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 VAT1Q99536 393 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 COLEC11Q9BWP8 271 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 TMEM120AQ9BXJ8 343 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 GBA3Q9H227 469 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 LRRC40Q9H9A6 602 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 ANLNQ9NQW6 1124 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 TMEM30AQ9NV96 361 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 TMLHEQ9NVH6 421 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 TMEM51Q9NW97 253 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 BFARQ9NZS9 450 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 DCTN4Q9UJW0 460 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 TRHDEQ9UKU6 1024 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 PCDHB8Q9UN66 801 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 STK38LQ9Y2H1 464 aa10.7□□□□□ -0.7
CPNE1-218ENST00000439806 MTO1Q9Y2Z2 717 aaKnown RBP10.7□□□□□ -0.7
CPNE1-218ENST00000439806 THSD7BQ9C0I4 1608 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 NUP205Q92621 2012 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 A0A0G2JND7 137 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 ERI2A8K979 691 aaKnown RBP10.69□□□□□ -0.7
CPNE1-218ENST00000439806 BIRC5O15392 142 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 HNRNPCL1O60812 293 aaKnown RBP10.69□□□□□ -0.7
CPNE1-218ENST00000439806 LRIG2O94898 1065 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 HAUS5O94927 633 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 AP2A1O95782 977 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms