RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 IP6K2Q9UHH9 426 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 AGTPBP1Q9UPW5 1226 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 SLC27A5Q9Y2P5 690 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 TRAF6Q9Y4K3 522 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 PCDHA1Q9Y5I3 950 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 ZHX2Q9Y6X8 837 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 GOLGA8QA0A0J9YX86 632 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 GOLGA8OA6NCC3 632 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 FAM155AB1AL88 458 aaPredicted RBP13.1□□□□□ -0.31
HERC3-203ENST00000407637 GOLGA8NF8WBI6 632 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 SOCS2O14508 198 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 MEIS2O14770 477 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 CLPXO76031 633 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 LDHCP07864 332 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 TUFMP49411 452 aaKnown RBP13.1□□□□□ -0.31
HERC3-203ENST00000407637 YWHAZP63104 245 aaKnown RBP13.1□□□□□ -0.31
HERC3-203ENST00000407637 TRPC3Q13507 836 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 LRP8Q14114 963 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 QRICH1Q2TAL8 776 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 ZNF354CQ86Y25 554 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 CLIP4Q8N3C7 705 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 TERB1Q8NA31 727 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 OR7G1Q8NGA0 311 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 MAPK15Q8TD08 544 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 CALML6Q8TD86 181 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 PPP1R36Q96LQ0 422 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 FAM96AQ9H5X1 160 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 PNPLA8Q9NP80 782 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 PCDH12Q9NPG4 1184 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 ANKMY1Q9P2S6 941 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 SERPINB13Q9UIV8 391 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 TNRC6CQ9HCJ0 1690 aaKnown RBP13.1□□□□□ -0.31
HERC3-203ENST00000407637 MSI1O43347 362 aaKnown RBP13.09□□□□□ -0.31
HERC3-203ENST00000407637 AKAP10O43572 662 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 CST8O60676 142 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 CYP3A4P08684 503 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 IL2RBP14784 551 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 TAL1P17542 331 aaPredicted RBP13.09□□□□□ -0.31
HERC3-203ENST00000407637 POLR2BP30876 1174 aaKnown RBP13.09□□□□□ -0.31
HERC3-203ENST00000407637 NR4A2P43354 598 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 NOMO3P69849 1222 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 DPYSL3Q14195 570 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 MAMDC4Q6UXC1 1216 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 BPHLQ86WA6 291 aaPredicted RBP13.09□□□□□ -0.31
HERC3-203ENST00000407637 ELMOD1Q8N336 334 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 FBXL13Q8NEE6 735 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 TNIP2Q8NFZ5 429 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 NOL11Q9H8H0 719 aaKnown RBP13.09□□□□□ -0.31
HERC3-203ENST00000407637 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.09□□□□□ -0.31
HERC3-203ENST00000407637 SMOXQ9NWM0 555 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 NXF1Q9UBU9 619 aaKnown RBP13.09□□□□□ -0.31
HERC3-203ENST00000407637 ZC3H7BQ9UGR2 993 aaKnown RBP13.09□□□□□ -0.31
HERC3-203ENST00000407637 VPS28Q9UK41 221 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 C6orf229H3BNL8 230 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 CLOCKO15516 846 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 VAPBO95292 243 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 SMTNL2Q2TAL5 461 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 FAAH2Q6GMR7 532 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 HMBOX1Q6NT76 420 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 KCTD8Q6ZWB6 473 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 FRA10AC1Q70Z53 315 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 PGAM4Q8N0Y7 254 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 TFAP2CQ92754 450 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 PGBD4Q96DM1 585 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 TMA16Q96EY4 203 aaKnown RBP13.09□□□□□ -0.31
HERC3-203ENST00000407637 MCEEQ96PE7 176 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 ACO2Q99798 780 aaKnown RBP13.09□□□□□ -0.31
HERC3-203ENST00000407637 POPDC2Q9HBU9 364 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 SEPT3Q9UH03 358 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 PTBP2Q9UKA9 531 aaKnown RBP13.09□□□□□ -0.31
HERC3-203ENST00000407637 NEMP1O14524 444 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 MATN1P21941 496 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 TTKP33981 857 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 PTPN7P35236 360 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 ABCE1P61221 599 aaKnown RBP13.09□□□□□ -0.31
HERC3-203ENST00000407637 OGDHQ02218 1023 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 INAVAQ3KP66 663 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 TRMT10BQ6PF06 316 aaKnown RBP13.09□□□□□ -0.31
HERC3-203ENST00000407637 DPP8Q6V1X1 898 aaPredicted RBP13.09□□□□□ -0.31
HERC3-203ENST00000407637 ZBTB49Q6ZSB9 765 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 CHST15Q7LFX5 561 aaPredicted RBP13.09□□□□□ -0.31
HERC3-203ENST00000407637 SPATA17Q96L03 361 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 MTG1Q9BT17 334 aaPredicted RBP13.09□□□□□ -0.31
HERC3-203ENST00000407637 PCDHB2Q9Y5E7 798 aa13.09□□□□□ -0.31
HERC3-203ENST00000407637 RGSL1A5PLK6 1076 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 PMM2O15305 246 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 FARP2O94887 1054 aaPredicted RBP13.08□□□□□ -0.32
HERC3-203ENST00000407637 CLIC3O95833 236 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 POLR2EP19388 210 aaKnown RBP13.08□□□□□ -0.32
HERC3-203ENST00000407637 PRKCHP24723 683 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 KCNJ11Q14654 390 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 SNRNP35Q16560 246 aaKnown RBP13.08□□□□□ -0.32
HERC3-203ENST00000407637 FAM117BQ6P1L5 589 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 EPGNQ6UW88 154 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 HERC6Q8IVU3 1022 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 ZNF781Q8N8C0 355 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 NACC2Q96BF6 587 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 RNF38Q9H0F5 515 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 PCDHAC1Q9H158 963 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 TP63Q9H3D4 680 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms