RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 SLC8A2Q9UPR5 921 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 LINC00854A0A1B0GVQ3 168 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 DNM1LO00429 736 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 TRUB2O95900 331 aaKnown RBP9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 PTPN1P18031 435 aaKnown RBP9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 NFKB1P19838 968 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 MMP8P22894 467 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 PPARGP37231 505 aaPredicted RBP9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 VHLP40337 213 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 NDUFV1P49821 464 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 ARHGDIAP52565 204 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 GDF10P55107 478 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 TBL3Q12788 808 aaKnown RBP9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 ITIH4Q14624 930 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 LRRC23Q53EV4 343 aaPredicted RBP9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 MARC1Q5VT66 337 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 ZNF786Q8N393 782 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 TEKT4Q8WW24 435 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 ZNF516Q92618 1163 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 AZIN2Q96A70 460 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 TMEM169Q96HH4 297 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 OXNAD1Q96HP4 312 aaPredicted RBP9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 TINF2Q9BSI4 451 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 CINPQ9BW66 212 aaPredicted RBP9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 EIF2AQ9BY44 585 aaKnown RBP9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 ELOVL4Q9GZR5 314 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 DPEP3Q9H4B8 488 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 CACYBPQ9HB71 228 aaKnown RBP9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 SNCAIPQ9Y6H5 919 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 TMEM191CA6NGB0 347 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 MAFO75444 373 aaPredicted RBP9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 EPHA3P29320 983 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 FDFT1P37268 417 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 CCL23P55773 120 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 MRPS22P82650 360 aaKnown RBP9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 BMT2Q1RMZ1 405 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 VWA5B1Q5TIE3 1220 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 PMF1Q6P1K2 205 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 CCDC81Q6ZN84 652 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 NIPA1Q7RTP0 329 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 DCP1BQ8IZD4 617 aaKnown RBP9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 RIN3Q8TB24 985 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 ART4Q93070 314 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 KDM4CQ9H3R0 1056 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 LRRC19Q9H756 370 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 TCF7L2Q9NQB0 619 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 FER1L6Q2WGJ9 1857 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 MBL2P11226 248 aaPredicted RBP9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 PTPN4P29074 926 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 CD52P31358 61 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 NCKAP1LP55160 1127 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 ZNF177Q13360 481 aaPredicted RBP9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 NRF1Q16656 503 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 FSCN1Q16658 493 aaKnown RBP9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 CERCAMQ5T4B2 595 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 TPGS1Q6ZTW0 290 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 CFAP52Q8N1V2 620 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 DCUN1D1Q96GG9 259 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 ACOX2Q99424 681 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 CIPCQ9C0C6 399 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 VPS33BQ9H267 617 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 WDR55Q9H6Y2 383 aaPredicted RBP9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 NRDE2Q9H7Z3 1164 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 ZMYM5Q9UJ78 669 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 ITGA11Q9UKX5 1188 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 RNF112Q9ULX5 631 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 PCDHB7Q9Y5E2 793 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 BAZ2AQ9UIF9 1905 aaKnown RBP9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 TTLL13PA6NNM8 815 aa9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 TREHO43280 583 aa9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 ANXA9O76027 345 aa9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 HIST1H2AGP0C0S8 130 aaPredicted RBP9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 SPATA31D3P0C874 917 aa9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 HIST1H2ADP20671 130 aa9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 ALDH1A3P47895 512 aa9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 SPIRE1Q08AE8 756 aa9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 FNBP1LQ5T0N5 605 aa9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 RIPOR1Q6ZS17 1223 aa9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 SPATA31D4Q6ZUB0 917 aa9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 UTS2BQ765I0 119 aa9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 OTOAQ7RTW8 1153 aa9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 UNC5BQ8IZJ1 945 aa9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 GPC2Q8N158 579 aa9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 ALLCQ8N6M5 410 aa9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 VCPIP1Q96JH7 1222 aa9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 HIST1H2AHQ96KK5 128 aa9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 CCT7Q99832 543 aa9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 HIST1H2AJQ99878 128 aa9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 H2AFJQ9BTM1 129 aa9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 ZNF395Q9H8N7 513 aaPredicted RBP9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 EML4Q9HC35 981 aaKnown RBP9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 KIAA1257Q9ULG3 409 aa9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 DTNAQ9Y4J8 743 aa9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 IGKV6D-41A0A0C4DH26 115 aa9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 MGEA5O60502 916 aa9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 USP1O94782 785 aa9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 LMO2P25791 158 aa9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 GP5P40197 560 aa9.3□□□□□ -0.92
SMARCA1-202ENST00000371122 RGS2P41220 211 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms