RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 MAP3K6O95382 1288 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 LATS1O95835 1130 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 RPS24P62847 133 aaKnown RBP11.28□□□□□ -0.6
BRCC3-204ENST00000369462 SIX1Q15475 284 aaPredicted RBP11.28□□□□□ -0.6
BRCC3-204ENST00000369462 ZNF77Q15935 545 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 SLC9A4Q6AI14 798 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 C1orf228Q6PIY5 440 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 NPNTQ6UXI9 565 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 CIR1Q86X95 450 aaPredicted RBP11.28□□□□□ -0.6
BRCC3-204ENST00000369462 CEP112Q8N8E3 955 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 MAIP1Q8WWC4 291 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 C1orf54Q8WWF1 131 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 ATG4AQ8WYN0 398 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 LRRC3BQ96PB8 259 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 RBM12Q9NTZ6 932 aaKnown RBP11.28□□□□□ -0.6
BRCC3-204ENST00000369462 STOML2Q9UJZ1 356 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 ZNF510Q9Y2H8 683 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 COL6A3P12111 3177 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 IGLV3-10A0A075B6K4 115 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 GOLGA6L10A0A0M3HER8 536 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 CTAGE15A4D2H0 777 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 RIOK3O14730 519 aaKnown RBP11.28□□□□□ -0.6
BRCC3-204ENST00000369462 CNTN5O94779 1100 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 CTAGE8P0CG41 777 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 SP100P23497 879 aaPredicted RBP11.28□□□□□ -0.6
BRCC3-204ENST00000369462 HTR7P34969 479 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 ALFQ53S48 1182 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 NCBP2-AS2Q69YL0 99 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 TMCO3Q6UWJ1 677 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 TFAP2DQ7Z6R9 452 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 CTAGE6Q86UF2 777 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 CTAGE4Q8IX94 777 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 PRELID2Q8N945 189 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 NETO2Q8NC67 525 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 BHMTQ93088 406 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 RSPRY1Q96DX4 576 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 NECTIN4Q96NY8 510 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 DDX50Q9BQ39 737 aaKnown RBP11.28□□□□□ -0.6
BRCC3-204ENST00000369462 ZYG11BQ9C0D3 744 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 CATSPERBQ9H7T0 1116 aa11.28□□□□□ -0.6
BRCC3-204ENST00000369462 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.27□□□□□ -0.6
BRCC3-204ENST00000369462 APOC4-APOC2K7ER74 178 aa11.27□□□□□ -0.6
BRCC3-204ENST00000369462 DCLK1O15075 740 aa11.27□□□□□ -0.6
BRCC3-204ENST00000369462 APOC2P02655 101 aa11.27□□□□□ -0.6
BRCC3-204ENST00000369462 PECAM1P16284 738 aaPredicted RBP11.27□□□□□ -0.6
BRCC3-204ENST00000369462 ZFXP17010 805 aaPredicted RBP11.27□□□□□ -0.6
BRCC3-204ENST00000369462 WEE1P30291 646 aa11.27□□□□□ -0.6
BRCC3-204ENST00000369462 HOXC13P31276 330 aa11.27□□□□□ -0.6
BRCC3-204ENST00000369462 CHKAP35790 457 aa11.27□□□□□ -0.6
BRCC3-204ENST00000369462 OTUD4Q01804 1114 aaKnown RBP11.27□□□□□ -0.6
BRCC3-204ENST00000369462 GBE1Q04446 702 aa11.27□□□□□ -0.6
BRCC3-204ENST00000369462 C2orf54Q08AI8 447 aa11.27□□□□□ -0.6
BRCC3-204ENST00000369462 CCDC33Q8N5R6 958 aa11.27□□□□□ -0.6
BRCC3-204ENST00000369462 ACTL9Q8TC94 416 aa11.27□□□□□ -0.6
BRCC3-204ENST00000369462 SUSD6Q92537 303 aa11.27□□□□□ -0.6
BRCC3-204ENST00000369462 P3H4Q92791 437 aa11.27□□□□□ -0.6
BRCC3-204ENST00000369462 PRICKLE1Q96MT3 831 aaPredicted RBP11.27□□□□□ -0.6
BRCC3-204ENST00000369462 LINC00597Q9H2U6 94 aa11.27□□□□□ -0.6
BRCC3-204ENST00000369462 KIF9Q9HAQ2 790 aa11.27□□□□□ -0.6
BRCC3-204ENST00000369462 PPARGC1AQ9UBK2 798 aaKnown RBP11.27□□□□□ -0.6
BRCC3-204ENST00000369462 ZFP37Q9Y6Q3 630 aaPredicted RBP11.27□□□□□ -0.6
BRCC3-204ENST00000369462 DOCK8Q8NF50 2099 aa11.27□□□□□ -0.6
BRCC3-204ENST00000369462 DRGXA6NNA5 263 aa11.27□□□□□ -0.61
BRCC3-204ENST00000369462 FGF10O15520 208 aaPredicted RBP11.27□□□□□ -0.61
BRCC3-204ENST00000369462 LAMP2P13473 410 aa11.27□□□□□ -0.61
BRCC3-204ENST00000369462 SGSHP51688 502 aa11.27□□□□□ -0.61
BRCC3-204ENST00000369462 USP4Q13107 963 aa11.27□□□□□ -0.61
BRCC3-204ENST00000369462 SNX1Q13596 522 aa11.27□□□□□ -0.61
BRCC3-204ENST00000369462 RABGAP1LQ5R372 815 aa11.27□□□□□ -0.61
BRCC3-204ENST00000369462 TPGS1Q6ZTW0 290 aa11.27□□□□□ -0.61
BRCC3-204ENST00000369462 ZNF572Q7Z3I7 529 aaPredicted RBP11.27□□□□□ -0.61
BRCC3-204ENST00000369462 TDRD5Q8NAT2 981 aaKnown RBP11.27□□□□□ -0.61
BRCC3-204ENST00000369462 LRRN4CLQ8ND94 238 aa11.27□□□□□ -0.61
BRCC3-204ENST00000369462 MAGOHBQ96A72 148 aaKnown RBP11.27□□□□□ -0.61
BRCC3-204ENST00000369462 TMA16Q96EY4 203 aaKnown RBP11.27□□□□□ -0.61
BRCC3-204ENST00000369462 ZFP14Q9HCL3 533 aa11.27□□□□□ -0.61
BRCC3-204ENST00000369462 NDFIP2Q9NV92 336 aa11.27□□□□□ -0.61
BRCC3-204ENST00000369462 GRXCR2A6NFK2 248 aa11.27□□□□□ -0.61
BRCC3-204ENST00000369462 RHOQP17081 205 aa11.27□□□□□ -0.61
BRCC3-204ENST00000369462 TGM2P21980 687 aa11.27□□□□□ -0.61
BRCC3-204ENST00000369462 SLC10A2Q12908 348 aaPredicted RBP11.27□□□□□ -0.61
BRCC3-204ENST00000369462 TANGO2Q6ICL3 276 aa11.27□□□□□ -0.61
BRCC3-204ENST00000369462 KLHL7Q8IXQ5 586 aa11.27□□□□□ -0.61
BRCC3-204ENST00000369462 NPWQ8N729 165 aa11.27□□□□□ -0.61
BRCC3-204ENST00000369462 TTC13Q8NBP0 860 aa11.27□□□□□ -0.61
BRCC3-204ENST00000369462 HLA-CQ95604 372 aa11.27□□□□□ -0.61
BRCC3-204ENST00000369462 DDX47Q9H0S4 455 aaKnown RBP11.27□□□□□ -0.61
BRCC3-204ENST00000369462 DTLQ9NZJ0 730 aa11.27□□□□□ -0.61
BRCC3-204ENST00000369462 WNT6Q9Y6F9 365 aa11.27□□□□□ -0.61
BRCC3-204ENST00000369462 HEPACAM2A8MVW5 462 aa11.26□□□□□ -0.61
BRCC3-204ENST00000369462 MFSD11O43934 449 aa11.26□□□□□ -0.61
BRCC3-204ENST00000369462 SLU7O95391 586 aaKnown RBP11.26□□□□□ -0.61
BRCC3-204ENST00000369462 TCF3P15923 654 aa11.26□□□□□ -0.61
BRCC3-204ENST00000369462 C5orf22Q49AR2 442 aa11.26□□□□□ -0.61
BRCC3-204ENST00000369462 ZC3H18Q86VM9 953 aaKnown RBP11.26□□□□□ -0.61
BRCC3-204ENST00000369462 NLRP14Q86W24 1093 aa11.26□□□□□ -0.61
BRCC3-204ENST00000369462 TP53INP2Q8IXH6 220 aa11.26□□□□□ -0.61
BRCC3-204ENST00000369462 FAM217AQ8IXS0 508 aa11.26□□□□□ -0.61
BRCC3-204ENST00000369462 RTL3Q8N8U3 475 aaKnown RBP11.26□□□□□ -0.61
BRCC3-204ENST00000369462 BPIFB1Q8TDL5 484 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms