RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 TRIM55Q9BYV6 548 aa18.79■□□□□ 0.6
SHISA3-201ENST00000319234 RAB6BQ9NRW1 208 aa18.79■□□□□ 0.6
SHISA3-201ENST00000319234 ZFP69BQ9UJL9 534 aa18.79■□□□□ 0.6
SHISA3-201ENST00000319234 HAO1Q9UJM8 370 aa18.79■□□□□ 0.6
SHISA3-201ENST00000319234 CENPFP49454 3210 aa18.79■□□□□ 0.6
SHISA3-201ENST00000319234 EEF2KO00418 725 aaKnown RBP18.79■□□□□ 0.6
SHISA3-201ENST00000319234 GCATO75600 419 aa18.79■□□□□ 0.6
SHISA3-201ENST00000319234 GSTA2P09210 222 aa18.79■□□□□ 0.6
SHISA3-201ENST00000319234 BEND5Q7L4P6 421 aa18.79■□□□□ 0.6
SHISA3-201ENST00000319234 IGDCC3Q8IVU1 814 aa18.79■□□□□ 0.6
SHISA3-201ENST00000319234 NSMCE1Q8WV22 266 aa18.79■□□□□ 0.6
SHISA3-201ENST00000319234 EDEM1Q92611 657 aa18.79■□□□□ 0.6
SHISA3-201ENST00000319234 SLC7A6OSQ96CW6 309 aaPredicted RBP18.79■□□□□ 0.6
SHISA3-201ENST00000319234 OLFM3Q96PB7 478 aa18.79■□□□□ 0.6
SHISA3-201ENST00000319234 TRIM62Q9BVG3 475 aa18.79■□□□□ 0.6
SHISA3-201ENST00000319234 NPHS2Q9NP85 383 aa18.79■□□□□ 0.6
SHISA3-201ENST00000319234 DDIT4Q9NX09 232 aa18.79■□□□□ 0.6
SHISA3-201ENST00000319234 SLC17A7Q9P2U7 560 aa18.79■□□□□ 0.6
SHISA3-201ENST00000319234 DNAJB4Q9UDY4 337 aa18.79■□□□□ 0.6
SHISA3-201ENST00000319234 ZNF180Q9UJW8 692 aa18.79■□□□□ 0.6
SHISA3-201ENST00000319234 MFHAS1Q9Y4C4 1052 aa18.79■□□□□ 0.6
SHISA3-201ENST00000319234 PCDHB7Q9Y5E2 793 aa18.79■□□□□ 0.6
SHISA3-201ENST00000319234 CREB3O43889 395 aa18.78■□□□□ 0.6
SHISA3-201ENST00000319234 TADA2AO75478 443 aa18.78■□□□□ 0.6
SHISA3-201ENST00000319234 ETV4P43268 484 aa18.78■□□□□ 0.6
SHISA3-201ENST00000319234 YWHAGP61981 247 aaKnown RBP eCLIP18.78■□□□□ 0.6
SHISA3-201ENST00000319234 ARL13BQ3SXY8 428 aa18.78■□□□□ 0.6
SHISA3-201ENST00000319234 SH2D5Q6ZV89 423 aa18.78■□□□□ 0.6
SHISA3-201ENST00000319234 DCP1BQ8IZD4 617 aaKnown RBP18.78■□□□□ 0.6
SHISA3-201ENST00000319234 GPATCH11Q8N954 259 aa18.78■□□□□ 0.6
SHISA3-201ENST00000319234 SEPT8Q92599 483 aa18.78■□□□□ 0.6
SHISA3-201ENST00000319234 KLC2Q9H0B6 622 aa18.78■□□□□ 0.6
SHISA3-201ENST00000319234 ZCWPW1Q9H0M4 648 aa18.78■□□□□ 0.6
SHISA3-201ENST00000319234 TLE6Q9H808 572 aa18.78■□□□□ 0.6
SHISA3-201ENST00000319234 PRG3Q9Y2Y8 225 aaPredicted RBP18.78■□□□□ 0.6
SHISA3-201ENST00000319234 SF3B1O75533 1304 aaKnown RBP eCLIP18.78■□□□□ 0.6
SHISA3-201ENST00000319234 PITPNM1O00562 1244 aa18.77■□□□□ 0.6
SHISA3-201ENST00000319234 TRDMT1O14717 391 aaKnown RBP18.77■□□□□ 0.6
SHISA3-201ENST00000319234 PTPN4P29074 926 aa18.77■□□□□ 0.6
SHISA3-201ENST00000319234 CXCR3P49682 368 aa18.77■□□□□ 0.6
SHISA3-201ENST00000319234 HTRA3P83110 453 aa18.77■□□□□ 0.6
SHISA3-201ENST00000319234 DPYSQ14117 519 aa18.77■□□□□ 0.6
SHISA3-201ENST00000319234 KBTBD12Q3ZCT8 623 aa18.77■□□□□ 0.6
SHISA3-201ENST00000319234 TAF1BQ53T94 588 aaPredicted RBP18.77■□□□□ 0.6
SHISA3-201ENST00000319234 WASHC2DQ5SRD0 308 aa18.77■□□□□ 0.6
SHISA3-201ENST00000319234 RFX8Q6ZV50 586 aa18.77■□□□□ 0.6
SHISA3-201ENST00000319234 SLC26A11Q86WA9 606 aa18.77■□□□□ 0.6
SHISA3-201ENST00000319234 ABI1Q8IZP0 508 aa18.77■□□□□ 0.6
SHISA3-201ENST00000319234 LRRN4Q8WUT4 740 aa18.77■□□□□ 0.6
SHISA3-201ENST00000319234 TFB1MQ8WVM0 346 aaKnown RBP18.77■□□□□ 0.6
SHISA3-201ENST00000319234 LRRC39Q96DD0 335 aa18.77■□□□□ 0.6
SHISA3-201ENST00000319234 COLEC11Q9BWP8 271 aa18.77■□□□□ 0.6
SHISA3-201ENST00000319234 TSSK1BQ9BXA7 367 aa18.77■□□□□ 0.6
SHISA3-201ENST00000319234 KLF11O14901 512 aa18.77■□□□□ 0.59
SHISA3-201ENST00000319234 SYN3O14994 580 aa18.77■□□□□ 0.59
SHISA3-201ENST00000319234 DNAJC6O75061 913 aa18.77■□□□□ 0.59
SHISA3-201ENST00000319234 GRIK1P39086 918 aa18.77■□□□□ 0.59
SHISA3-201ENST00000319234 HCAR3P49019 387 aa18.77■□□□□ 0.59
SHISA3-201ENST00000319234 SEMA3BQ13214 749 aa18.77■□□□□ 0.59
SHISA3-201ENST00000319234 PAFAH1B3Q15102 231 aaKnown RBP18.77■□□□□ 0.59
SHISA3-201ENST00000319234 SLC39A12Q504Y0 691 aa18.77■□□□□ 0.59
SHISA3-201ENST00000319234 LGSNQ5TDP6 509 aa18.77■□□□□ 0.59
SHISA3-201ENST00000319234 TTC39BQ5VTQ0 682 aaPredicted RBP18.77■□□□□ 0.59
SHISA3-201ENST00000319234 CLNKQ7Z7G1 428 aa18.77■□□□□ 0.59
SHISA3-201ENST00000319234 MAB21L3Q8N8X9 362 aa18.77■□□□□ 0.59
SHISA3-201ENST00000319234 MCUQ8NE86 351 aa18.77■□□□□ 0.59
SHISA3-201ENST00000319234 CCDC110Q8TBZ0 833 aa18.77■□□□□ 0.59
SHISA3-201ENST00000319234 TBC1D10AQ9BXI6 508 aa18.77■□□□□ 0.59
SHISA3-201ENST00000319234 PAK6Q9NQU5 681 aaPredicted RBP18.77■□□□□ 0.59
SHISA3-201ENST00000319234 ANLNQ9NQW6 1124 aa18.77■□□□□ 0.59
SHISA3-201ENST00000319234 MTO1Q9Y2Z2 717 aaKnown RBP18.77■□□□□ 0.59
SHISA3-201ENST00000319234 GOLGA8RI6L899 631 aa18.76■□□□□ 0.59
SHISA3-201ENST00000319234 TNFRSF10BO14763 440 aa18.76■□□□□ 0.59
SHISA3-201ENST00000319234 MFSD11O43934 449 aa18.76■□□□□ 0.59
SHISA3-201ENST00000319234 OR4Q2P0C623 313 aa18.76■□□□□ 0.59
SHISA3-201ENST00000319234 ZNF135P52742 658 aaPredicted RBP18.76■□□□□ 0.59
SHISA3-201ENST00000319234 FAAP100Q0VG06 881 aa18.76■□□□□ 0.59
SHISA3-201ENST00000319234 HEATR6Q6AI08 1181 aaKnown RBP18.76■□□□□ 0.59
SHISA3-201ENST00000319234 CFAP61Q8NHU2 1237 aa18.76■□□□□ 0.59
SHISA3-201ENST00000319234 SCAMP5Q8TAC9 235 aa18.76■□□□□ 0.59
SHISA3-201ENST00000319234 SERAC1Q96JX3 654 aa18.76■□□□□ 0.59
SHISA3-201ENST00000319234 CASD1Q96PB1 797 aa18.76■□□□□ 0.59
SHISA3-201ENST00000319234 WDCPQ9H6R7 721 aa18.76■□□□□ 0.59
SHISA3-201ENST00000319234 WDR91A4D1P6 747 aa18.75■□□□□ 0.59
SHISA3-201ENST00000319234 DCLK1O15075 740 aa18.75■□□□□ 0.59
SHISA3-201ENST00000319234 SLC5A3P53794 718 aa18.75■□□□□ 0.59
SHISA3-201ENST00000319234 PRKD1Q15139 912 aaPredicted RBP18.75■□□□□ 0.59
SHISA3-201ENST00000319234 CTC1Q2NKJ3 1217 aa18.75■□□□□ 0.59
SHISA3-201ENST00000319234 TAC4Q86UU9 113 aa18.75■□□□□ 0.59
SHISA3-201ENST00000319234 TRIM42Q8IWZ5 723 aa18.75■□□□□ 0.59
SHISA3-201ENST00000319234 CCDC33Q8N5R6 958 aa18.75■□□□□ 0.59
SHISA3-201ENST00000319234 HTR3CQ8WXA8 447 aa18.75■□□□□ 0.59
SHISA3-201ENST00000319234 DEFB118Q96PH6 123 aa18.75■□□□□ 0.59
SHISA3-201ENST00000319234 RNPEPL1Q9HAU8 725 aa18.75■□□□□ 0.59
SHISA3-201ENST00000319234 BATF3Q9NR55 127 aa18.75■□□□□ 0.59
SHISA3-201ENST00000319234 MKS1Q9NXB0 559 aa18.75■□□□□ 0.59
SHISA3-201ENST00000319234 LRFN2Q9ULH4 789 aa18.75■□□□□ 0.59
SHISA3-201ENST00000319234 TTLL3Q9Y4R7 772 aa18.75■□□□□ 0.59
SHISA3-201ENST00000319234 COL4A4P53420 1690 aaPredicted RBP18.75■□□□□ 0.59
SHISA3-201ENST00000319234 DNAH12Q6ZR08 3092 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms