RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 SYNCQ9H7C4 482 aa22.24■■□□□ 1.15
PPP4R1-228ENST00000584074 ASNSD1Q9NWL6 643 aa22.24■■□□□ 1.15
PPP4R1-228ENST00000584074 DDIT4Q9NX09 232 aa22.24■■□□□ 1.15
PPP4R1-228ENST00000584074 COX16Q9P0S2 106 aa22.24■■□□□ 1.15
PPP4R1-228ENST00000584074 PLA2G4CQ9UP65 541 aa22.24■■□□□ 1.15
PPP4R1-228ENST00000584074 CEP83Q9Y592 693 aa22.24■■□□□ 1.15
PPP4R1-228ENST00000584074 LNP1A1A4G5 178 aa22.23■■□□□ 1.15
PPP4R1-228ENST00000584074 KHNYNO15037 678 aaKnown RBP22.23■■□□□ 1.15
PPP4R1-228ENST00000584074 ITPKAP23677 461 aa22.23■■□□□ 1.15
PPP4R1-228ENST00000584074 KLK7P49862 253 aa22.23■■□□□ 1.15
PPP4R1-228ENST00000584074 COPAP53621 1224 aa22.23■■□□□ 1.15
PPP4R1-228ENST00000584074 PTPRNQ16849 979 aa22.23■■□□□ 1.15
PPP4R1-228ENST00000584074 TAF3Q5VWG9 929 aa22.23■■□□□ 1.15
PPP4R1-228ENST00000584074 RAP1GAP2Q684P5 730 aa22.23■■□□□ 1.15
PPP4R1-228ENST00000584074 IL31Q6EBC2 164 aa22.23■■□□□ 1.15
PPP4R1-228ENST00000584074 TMPRSS6Q8IU80 811 aa22.23■■□□□ 1.15
PPP4R1-228ENST00000584074 SYT12Q8IV01 421 aa22.23■■□□□ 1.15
PPP4R1-228ENST00000584074 LGI2Q8N0V4 545 aa22.23■■□□□ 1.15
PPP4R1-228ENST00000584074 CARNMT1Q8N4J0 409 aa22.23■■□□□ 1.15
PPP4R1-228ENST00000584074 ZNF366Q8N895 744 aa22.23■■□□□ 1.15
PPP4R1-228ENST00000584074 FIBINQ8TAL6 211 aa22.23■■□□□ 1.15
PPP4R1-228ENST00000584074 BTN2A3PQ96KV6 586 aa22.23■■□□□ 1.15
PPP4R1-228ENST00000584074 EDEM2Q9BV94 578 aa22.23■■□□□ 1.15
PPP4R1-228ENST00000584074 STK33Q9BYT3 514 aa22.23■■□□□ 1.15
PPP4R1-228ENST00000584074 TMEM245Q9H330 911 aa22.23■■□□□ 1.15
PPP4R1-228ENST00000584074 ANO10Q9NW15 660 aa22.23■■□□□ 1.15
PPP4R1-228ENST00000584074 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.23■■□□□ 1.15
PPP4R1-228ENST00000584074 ATXN2Q99700 1313 aaKnown RBP22.23■■□□□ 1.15
PPP4R1-228ENST00000584074 THADAQ6YHU6 1953 aa22.23■■□□□ 1.15
PPP4R1-228ENST00000584074 TYW5A2RUC4 315 aaKnown RBP22.22■■□□□ 1.15
PPP4R1-228ENST00000584074 F8VZ95 297 aa22.22■■□□□ 1.15
PPP4R1-228ENST00000584074 DLDP09622 509 aaKnown RBP22.22■■□□□ 1.15
PPP4R1-228ENST00000584074 SNX16P57768 344 aa22.22■■□□□ 1.15
PPP4R1-228ENST00000584074 IRX4P78413 519 aa22.22■■□□□ 1.15
PPP4R1-228ENST00000584074 SLC6A3Q01959 620 aa22.22■■□□□ 1.15
PPP4R1-228ENST00000584074 LMAN2Q12907 356 aa22.22■■□□□ 1.15
PPP4R1-228ENST00000584074 STX1AQ16623 288 aa22.22■■□□□ 1.15
PPP4R1-228ENST00000584074 FSCBQ5H9T9 825 aa22.22■■□□□ 1.15
PPP4R1-228ENST00000584074 NOP9Q86U38 636 aaKnown RBP22.22■■□□□ 1.15
PPP4R1-228ENST00000584074 METTL3Q86U44 580 aaKnown RBP22.22■■□□□ 1.15
PPP4R1-228ENST00000584074 CHSY1Q86X52 802 aa22.22■■□□□ 1.15
PPP4R1-228ENST00000584074 CACUL1Q86Y37 369 aa22.22■■□□□ 1.15
PPP4R1-228ENST00000584074 TMEM35BQ8NCS4 154 aa22.22■■□□□ 1.15
PPP4R1-228ENST00000584074 DDX1Q92499 740 aaKnown RBP22.22■■□□□ 1.15
PPP4R1-228ENST00000584074 GANQ9H2C0 597 aa22.22■■□□□ 1.15
PPP4R1-228ENST00000584074 PILRBQ9UKJ0 227 aa22.22■■□□□ 1.15
PPP4R1-228ENST00000584074 KCNU1A8MYU2 1149 aa22.21■■□□□ 1.15
PPP4R1-228ENST00000584074 TM4SF5O14894 197 aa22.21■■□□□ 1.15
PPP4R1-228ENST00000584074 MBD3O95983 291 aa22.21■■□□□ 1.15
PPP4R1-228ENST00000584074 ATP5BP06576 529 aaKnown RBP22.21■■□□□ 1.15
PPP4R1-228ENST00000584074 POLR2EP19388 210 aaKnown RBP22.21■■□□□ 1.15
PPP4R1-228ENST00000584074 TACR2P21452 398 aa22.21■■□□□ 1.15
PPP4R1-228ENST00000584074 CDH5P33151 784 aaPredicted RBP22.21■■□□□ 1.15
PPP4R1-228ENST00000584074 CDH18Q13634 790 aa22.21■■□□□ 1.15
PPP4R1-228ENST00000584074 CCDC183Q5T5S1 534 aa22.21■■□□□ 1.15
PPP4R1-228ENST00000584074 MMS22LQ6ZRQ5 1243 aa22.21■■□□□ 1.15
PPP4R1-228ENST00000584074 SLC26A9Q7LBE3 791 aa22.21■■□□□ 1.15
PPP4R1-228ENST00000584074 SLC41A1Q8IVJ1 513 aa22.21■■□□□ 1.15
PPP4R1-228ENST00000584074 ZNF557Q8N988 423 aaPredicted RBP22.21■■□□□ 1.15
PPP4R1-228ENST00000584074 SIPA1Q96FS4 1042 aa22.21■■□□□ 1.15
PPP4R1-228ENST00000584074 ITM2CQ9NQX7 267 aa22.21■■□□□ 1.15
PPP4R1-228ENST00000584074 FAM207AQ9NSI2 230 aaPredicted RBP22.21■■□□□ 1.15
PPP4R1-228ENST00000584074 PLXND1Q9Y4D7 1925 aa22.21■■□□□ 1.15
PPP4R1-228ENST00000584074 DAB1O75553 588 aa22.2■■□□□ 1.14
PPP4R1-228ENST00000584074 TPM2P07951 284 aa22.2■■□□□ 1.14
PPP4R1-228ENST00000584074 CCR1P32246 355 aa22.2■■□□□ 1.14
PPP4R1-228ENST00000584074 TPMTP51580 245 aa22.2■■□□□ 1.14
PPP4R1-228ENST00000584074 MYL5Q02045 173 aa22.2■■□□□ 1.14
PPP4R1-228ENST00000584074 ZNF33AQ06730 810 aa22.2■■□□□ 1.14
PPP4R1-228ENST00000584074 NME3Q13232 169 aa22.2■■□□□ 1.14
PPP4R1-228ENST00000584074 CAMK2GQ13555 558 aaPredicted RBP22.2■■□□□ 1.14
PPP4R1-228ENST00000584074 TRIM61Q5EBN2 209 aa22.2■■□□□ 1.14
PPP4R1-228ENST00000584074 ATP6V0D2Q8N8Y2 350 aa22.2■■□□□ 1.14
PPP4R1-228ENST00000584074 PRCCQ92733 491 aaPredicted RBP22.2■■□□□ 1.14
PPP4R1-228ENST00000584074 RNF34Q969K3 372 aa22.2■■□□□ 1.14
PPP4R1-228ENST00000584074 TOE1Q96GM8 510 aaKnown RBP22.2■■□□□ 1.14
PPP4R1-228ENST00000584074 HSPA12BQ96MM6 686 aa22.2■■□□□ 1.14
PPP4R1-228ENST00000584074 PRMT1Q99873 361 aaKnown RBP22.2■■□□□ 1.14
PPP4R1-228ENST00000584074 USP36Q9P275 1121 aaKnown RBP22.2■■□□□ 1.14
PPP4R1-228ENST00000584074 SLC12A6Q9UHW9 1150 aa22.2■■□□□ 1.14
PPP4R1-228ENST00000584074 INTS6Q9UL03 887 aaKnown RBP22.2■■□□□ 1.14
PPP4R1-228ENST00000584074 C4orf47A7E2U8 309 aa22.19■■□□□ 1.14
PPP4R1-228ENST00000584074 EPHB6O15197 1021 aa22.19■■□□□ 1.14
PPP4R1-228ENST00000584074 NDUFS2O75306 463 aa22.19■■□□□ 1.14
PPP4R1-228ENST00000584074 LUC7L3O95232 432 aaKnown RBP22.19■■□□□ 1.14
PPP4R1-228ENST00000584074 MMEP08473 750 aa22.19■■□□□ 1.14
PPP4R1-228ENST00000584074 SLC2A3P11169 496 aa22.19■■□□□ 1.14
PPP4R1-228ENST00000584074 ABCB4P21439 1286 aa22.19■■□□□ 1.14
PPP4R1-228ENST00000584074 CD6P30203 668 aa22.19■■□□□ 1.14
PPP4R1-228ENST00000584074 NOS2P35228 1153 aa22.19■■□□□ 1.14
PPP4R1-228ENST00000584074 CSKP41240 450 aa22.19■■□□□ 1.14
PPP4R1-228ENST00000584074 COPB1P53618 953 aaKnown RBP22.19■■□□□ 1.14
PPP4R1-228ENST00000584074 RNASE9P60153 205 aaKnown RBP22.19■■□□□ 1.14
PPP4R1-228ENST00000584074 POLR2FP61218 127 aaKnown RBP22.19■■□□□ 1.14
PPP4R1-228ENST00000584074 PPM1JQ5JR12 505 aa22.19■■□□□ 1.14
PPP4R1-228ENST00000584074 FKBP15Q5T1M5 1219 aa22.19■■□□□ 1.14
PPP4R1-228ENST00000584074 PEAR1Q5VY43 1037 aaPredicted RBP22.19■■□□□ 1.14
PPP4R1-228ENST00000584074 ZDHHC17Q8IUH5 632 aa22.19■■□□□ 1.14
PPP4R1-228ENST00000584074 CCDC117Q8IWD4 279 aaPredicted RBP22.19■■□□□ 1.14
PPP4R1-228ENST00000584074 ZNF397Q8NF99 534 aaPredicted RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms