RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 SNX9Q9Y5X1 595 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 KAT6AQ92794 2004 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 SYNJ2BP-COX16A0A087WUM0 186 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 FZD9O00144 591 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 B4GALT4O60513 344 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 EDF1O60869 148 aaKnown RBP5.55□□□□□ -1.52
VAPA-203ENST00000577539 DDNO94850 711 aaPredicted RBP5.55□□□□□ -1.52
VAPA-203ENST00000577539 IL18RAPO95256 599 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 ELF1P32519 619 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 SLC25A11Q02978 314 aaKnown RBP5.55□□□□□ -1.52
VAPA-203ENST00000577539 DPYSL3Q14195 570 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 ZNF268Q14587 947 aaPredicted RBP5.55□□□□□ -1.52
VAPA-203ENST00000577539 TTLL4Q14679 1199 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 PDK4Q16654 411 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 KBTBD12Q3ZCT8 623 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 ANKRD20A3Q5VUR7 823 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 RNF43Q68DV7 783 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 CASC4Q6P4E1 433 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 OTOAQ7RTW8 1153 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 POLNQ7Z5Q5 900 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 ACOT1Q86TX2 421 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 UBR7Q8N806 425 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 SLC4A11Q8NBS3 891 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 SLC13A1Q9BZW2 595 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 CEP44Q9C0F1 390 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 CXorf56Q9H5V9 222 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 PRMT7Q9NVM4 692 aaPredicted RBP5.55□□□□□ -1.52
VAPA-203ENST00000577539 COX16Q9P0S2 106 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 TSPAN16Q9UKR8 245 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 CHKBQ9Y259 395 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 CORINQ9Y5Q5 1042 aa5.55□□□□□ -1.52
VAPA-203ENST00000577539 KIAA1217Q5T5P2 1943 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.54□□□□□ -1.52
VAPA-203ENST00000577539 IQANK1A0A1B0GTG1 560 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 CCDC195A0A1B0GUA6 201 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 APOC4-APOC2K7ER74 178 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 GAS2O43903 313 aaKnown RBP5.54□□□□□ -1.52
VAPA-203ENST00000577539 UNC5CO95185 931 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 DLGAP3O95886 979 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 TRUB2O95900 331 aaKnown RBP5.54□□□□□ -1.52
VAPA-203ENST00000577539 APOC2P02655 101 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 ZNF286BP0CG31 522 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 EPHA1P21709 976 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 SDC4P31431 198 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 SESN3P58005 492 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 ZNF200P98182 395 aaPredicted RBP5.54□□□□□ -1.52
VAPA-203ENST00000577539 GOLGA7BQ2TAP0 167 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 TAF1BQ53T94 588 aaPredicted RBP5.54□□□□□ -1.52
VAPA-203ENST00000577539 ZC3H12AQ5D1E8 599 aaKnown RBP5.54□□□□□ -1.52
VAPA-203ENST00000577539 EFHC2Q5JST6 749 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 GLRA4Q5JXX5 417 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 TRIM68Q6AZZ1 485 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 MTDHQ86UE4 582 aaKnown RBP5.54□□□□□ -1.52
VAPA-203ENST00000577539 LRRC6Q86X45 466 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 OR6B3Q8NGW1 331 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 OR6P1Q8NGX9 317 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 PPP1R14CQ8TAE6 165 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 PIWIL1Q96J94 861 aaKnown RBP5.54□□□□□ -1.52
VAPA-203ENST00000577539 CNPY3Q9BT09 278 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 TRIM55Q9BYV6 548 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 DHX35Q9H5Z1 703 aaKnown RBP5.54□□□□□ -1.52
VAPA-203ENST00000577539 TXNRD2Q9NNW7 524 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 ERAP1Q9NZ08 941 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 HESX1Q9UBX0 185 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 GRID1Q9ULK0 1009 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 CYP8B1Q9UNU6 501 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 STARD13Q9Y3M8 1113 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 A0A1B0GUA9 196 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 TCRBV5S1A1TA0A578 114 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 TRIM49D1C9J1S8 452 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 COPEO14579 308 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 PRPF4O43172 522 aaKnown RBP eCLIP5.54□□□□□ -1.52
VAPA-203ENST00000577539 FAM189A1O60320 539 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 FAM155BO75949 473 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 ZWINTO95229 277 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 VDRP11473 427 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 RBL1P28749 1068 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 CDC25CP30307 473 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 IREB2P48200 963 aaKnown RBP5.54□□□□□ -1.52
VAPA-203ENST00000577539 ERFP50548 548 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 RASSF2P50749 326 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 BMPR2Q13873 1038 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 GALNTL6Q49A17 601 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 FAM183BPQ6ZVS7 135 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 LONP2Q86WA8 852 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 TDRPQ86YL5 185 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 IGDCC3Q8IVU1 814 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 VPS52Q8N1B4 723 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 NIPA2Q8N8Q9 360 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 NAT8LQ8N9F0 302 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 CCDC110Q8TBZ0 833 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 ACAP3Q96P50 834 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 TSSK1BQ9BXA7 367 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 LHX5Q9H2C1 402 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 FZD8Q9H461 694 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 ACSS3Q9H6R3 686 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 MANSC1Q9H8J5 431 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 ARHGEF4Q9NR80 690 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 DPP3Q9NY33 737 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 ZNF69Q9UC07 566 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms