RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 DGKGP49619 791 aa16.3■□□□□ 0.2
USB1-208ENST00000563207 YWHAGP61981 247 aaKnown RBP eCLIP16.3■□□□□ 0.2
USB1-208ENST00000563207 GEN1Q17RS7 908 aa16.3■□□□□ 0.2
USB1-208ENST00000563207 CLEC16AQ2KHT3 1053 aa16.3■□□□□ 0.2
USB1-208ENST00000563207 HSF5Q4G112 596 aaPredicted RBP16.3■□□□□ 0.2
USB1-208ENST00000563207 C18orf8Q96DM3 657 aa16.3■□□□□ 0.2
USB1-208ENST00000563207 CPXM1Q96SM3 734 aa16.3■□□□□ 0.2
USB1-208ENST00000563207 SYT11Q9BT88 431 aa16.3■□□□□ 0.2
USB1-208ENST00000563207 SYNCQ9H7C4 482 aa16.3■□□□□ 0.2
USB1-208ENST00000563207 OLA1Q9NTK5 396 aaKnown RBP16.3■□□□□ 0.2
USB1-208ENST00000563207 CALCOCO1Q9P1Z2 691 aa16.3■□□□□ 0.2
USB1-208ENST00000563207 WDR35Q9P2L0 1181 aa16.3■□□□□ 0.2
USB1-208ENST00000563207 FBXO10Q9UK96 956 aa16.3■□□□□ 0.2
USB1-208ENST00000563207 FRYQ5TBA9 3013 aa16.29■□□□□ 0.2
USB1-208ENST00000563207 SLC12A8A0AV02 714 aa16.29■□□□□ 0.2
USB1-208ENST00000563207 GOLGA6L3A6NEY3 463 aa16.29■□□□□ 0.2
USB1-208ENST00000563207 MFAP3LO75121 409 aa16.29■□□□□ 0.2
USB1-208ENST00000563207 KCNK5O95279 499 aa16.29■□□□□ 0.2
USB1-208ENST00000563207 GZMAP12544 262 aa16.29■□□□□ 0.2
USB1-208ENST00000563207 NDUFV2P19404 249 aa16.29■□□□□ 0.2
USB1-208ENST00000563207 ITPKAP23677 461 aa16.29■□□□□ 0.2
USB1-208ENST00000563207 SCNN1AP37088 669 aa16.29■□□□□ 0.2
USB1-208ENST00000563207 NSFP46459 744 aaKnown RBP16.29■□□□□ 0.2
USB1-208ENST00000563207 CENPCQ03188 943 aa16.29■□□□□ 0.2
USB1-208ENST00000563207 PTPN20Q4JDL3 420 aa16.29■□□□□ 0.2
USB1-208ENST00000563207 EFHC1Q5JVL4 640 aa16.29■□□□□ 0.2
USB1-208ENST00000563207 NAA35Q5VZE5 725 aa16.29■□□□□ 0.2
USB1-208ENST00000563207 HGSNATQ68CP4 663 aa16.29■□□□□ 0.2
USB1-208ENST00000563207 SCUBE3Q8IX30 993 aa16.29■□□□□ 0.2
USB1-208ENST00000563207 CHPFQ8IZ52 775 aa16.29■□□□□ 0.2
USB1-208ENST00000563207 EDEM1Q92611 657 aa16.29■□□□□ 0.2
USB1-208ENST00000563207 XPO6Q96QU8 1125 aaKnown RBP16.29■□□□□ 0.2
USB1-208ENST00000563207 ABHD10Q9NUJ1 306 aa16.29■□□□□ 0.2
USB1-208ENST00000563207 ASNSD1Q9NWL6 643 aa16.29■□□□□ 0.2
USB1-208ENST00000563207 MARCH2Q9P0N8 246 aa16.29■□□□□ 0.2
USB1-208ENST00000563207 SFMBT1Q9UHJ3 866 aa16.29■□□□□ 0.2
USB1-208ENST00000563207 STRIP2Q9ULQ0 834 aa16.29■□□□□ 0.2
USB1-208ENST00000563207 YJEFN3A6XGL0 299 aa16.28■□□□□ 0.2
USB1-208ENST00000563207 E7ENQ6 273 aa16.28■□□□□ 0.2
USB1-208ENST00000563207 KHNYNO15037 678 aaKnown RBP16.28■□□□□ 0.2
USB1-208ENST00000563207 PAPSS1O43252 624 aaPredicted RBP16.28■□□□□ 0.2
USB1-208ENST00000563207 ADCY5O95622 1261 aa16.28■□□□□ 0.2
USB1-208ENST00000563207 PENKP01210 267 aaPredicted RBP16.28■□□□□ 0.2
USB1-208ENST00000563207 LTFP02788 710 aa16.28■□□□□ 0.2
USB1-208ENST00000563207 MMP8P22894 467 aa16.28■□□□□ 0.2
USB1-208ENST00000563207 CDK17Q00537 523 aa16.28■□□□□ 0.2
USB1-208ENST00000563207 GOLGA8FQ08AF8 430 aa16.28■□□□□ 0.2
USB1-208ENST00000563207 GOLGA8DPQ0D2H9 430 aa16.28■□□□□ 0.2
USB1-208ENST00000563207 TDRD12Q587J7 1177 aaKnown RBP16.28■□□□□ 0.2
USB1-208ENST00000563207 BSPRYQ5W0U4 402 aa16.28■□□□□ 0.2
USB1-208ENST00000563207 E4F1Q66K89 784 aaPredicted RBP16.28■□□□□ 0.2
USB1-208ENST00000563207 PSAPL1Q6NUJ1 521 aa16.28■□□□□ 0.2
USB1-208ENST00000563207 LPCAT2Q7L5N7 544 aa16.28■□□□□ 0.2
USB1-208ENST00000563207 ZNF571Q7Z3V5 609 aaPredicted RBP16.28■□□□□ 0.2
USB1-208ENST00000563207 PHF13Q86YI8 300 aaPredicted RBP16.28■□□□□ 0.2
USB1-208ENST00000563207 CPA5Q8WXQ8 436 aa16.28■□□□□ 0.2
USB1-208ENST00000563207 SORCS1Q8WY21 1168 aa16.28■□□□□ 0.2
USB1-208ENST00000563207 VCPIP1Q96JH7 1222 aa16.28■□□□□ 0.2
USB1-208ENST00000563207 PCDHB18PQ96TA0 734 aa16.28■□□□□ 0.2
USB1-208ENST00000563207 GABRG3Q99928 467 aa16.28■□□□□ 0.2
USB1-208ENST00000563207 SEPT11Q9NVA2 429 aaKnown RBP16.28■□□□□ 0.2
USB1-208ENST00000563207 IMPACTQ9P2X3 320 aa16.28■□□□□ 0.2
USB1-208ENST00000563207 CYP8B1Q9UNU6 501 aa16.28■□□□□ 0.2
USB1-208ENST00000563207 IGHV1OR15-9A0A0B4J2B8 117 aa16.27■□□□□ 0.2
USB1-208ENST00000563207 SSU72P8A0A1W2PR75 194 aa16.27■□□□□ 0.2
USB1-208ENST00000563207 MSI1O43347 362 aaKnown RBP16.27■□□□□ 0.2
USB1-208ENST00000563207 TSPAN3O60637 253 aa16.27■□□□□ 0.2
USB1-208ENST00000563207 KRT37O76014 449 aa16.27■□□□□ 0.2
USB1-208ENST00000563207 CALB1P05937 261 aa16.27■□□□□ 0.2
USB1-208ENST00000563207 SKILP12757 684 aa16.27■□□□□ 0.2
USB1-208ENST00000563207 GSCP56915 257 aaPredicted RBP16.27■□□□□ 0.2
USB1-208ENST00000563207 YWHAZP63104 245 aaKnown RBP16.27■□□□□ 0.2
USB1-208ENST00000563207 SLC6A3Q01959 620 aa16.27■□□□□ 0.2
USB1-208ENST00000563207 C1QBPQ07021 282 aaKnown RBP16.27■□□□□ 0.2
USB1-208ENST00000563207 TRIM61Q5EBN2 209 aa16.27■□□□□ 0.2
USB1-208ENST00000563207 TMEM215Q68D42 235 aa16.27■□□□□ 0.2
USB1-208ENST00000563207 OR6B2Q6IFH4 312 aa16.27■□□□□ 0.2
USB1-208ENST00000563207 ACAD10Q6JQN1 1059 aa16.27■□□□□ 0.2
USB1-208ENST00000563207 RSRC2Q7L4I2 434 aaKnown RBP16.27■□□□□ 0.2
USB1-208ENST00000563207 SLC41A1Q8IVJ1 513 aa16.27■□□□□ 0.2
USB1-208ENST00000563207 KCNV2Q8TDN2 545 aa16.27■□□□□ 0.2
USB1-208ENST00000563207 CLEC4CQ8WTT0 213 aa16.27■□□□□ 0.2
USB1-208ENST00000563207 RNF139Q8WU17 664 aa16.27■□□□□ 0.2
USB1-208ENST00000563207 GRPEL1Q9HAV7 217 aa16.27■□□□□ 0.2
USB1-208ENST00000563207 POPDC2Q9HBU9 364 aa16.27■□□□□ 0.2
USB1-208ENST00000563207 TMEM51Q9NW97 253 aa16.27■□□□□ 0.2
USB1-208ENST00000563207 GON4LQ3T8J9 2241 aa16.26■□□□□ 0.19
USB1-208ENST00000563207 CNOT1A5YKK6 2376 aaKnown RBP16.26■□□□□ 0.19
USB1-208ENST00000563207 GOLGA6L6A8MZA4 724 aa16.26■□□□□ 0.19
USB1-208ENST00000563207 HSF2BPO75031 334 aa16.26■□□□□ 0.19
USB1-208ENST00000563207 ERBB2P04626 1255 aa16.26■□□□□ 0.19
USB1-208ENST00000563207 IL12RB1P42701 662 aa16.26■□□□□ 0.19
USB1-208ENST00000563207 MAPK8P45983 427 aa16.26■□□□□ 0.19
USB1-208ENST00000563207 SGSHP51688 502 aa16.26■□□□□ 0.19
USB1-208ENST00000563207 ADKP55263 362 aaKnown RBP16.26■□□□□ 0.19
USB1-208ENST00000563207 COG7P83436 770 aa16.26■□□□□ 0.19
USB1-208ENST00000563207 RPL6Q02878 288 aaKnown RBP16.26■□□□□ 0.19
USB1-208ENST00000563207 MAPK8IP2Q13387 824 aaPredicted RBP16.26■□□□□ 0.19
USB1-208ENST00000563207 UAP1L1Q3KQV9 507 aa16.26■□□□□ 0.19
USB1-208ENST00000563207 WDR59Q6PJI9 974 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms