RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 RUFY1Q96T51 708 aa20.16■□□□□ 0.82
RBFOX1-215ENST00000553186 CDC42EP4Q9H3Q1 356 aaKnown RBP20.16■□□□□ 0.82
RBFOX1-215ENST00000553186 NR2E3Q9Y5X4 410 aa20.16■□□□□ 0.82
RBFOX1-215ENST00000553186 RAD54BQ9Y620 910 aa20.16■□□□□ 0.82
RBFOX1-215ENST00000553186 TCRBV7S3A2A0A539 114 aa20.15■□□□□ 0.82
RBFOX1-215ENST00000553186 ZNF840PA6NDX5 716 aa20.15■□□□□ 0.82
RBFOX1-215ENST00000553186 RIPK2O43353 540 aa20.15■□□□□ 0.82
RBFOX1-215ENST00000553186 NUDT17P0C025 328 aa20.15■□□□□ 0.82
RBFOX1-215ENST00000553186 HTR7P34969 479 aa20.15■□□□□ 0.82
RBFOX1-215ENST00000553186 PIK3R6Q5UE93 754 aa20.15■□□□□ 0.82
RBFOX1-215ENST00000553186 HEATR6Q6AI08 1181 aaKnown RBP20.15■□□□□ 0.82
RBFOX1-215ENST00000553186 TRMT10CQ7L0Y3 403 aaKnown RBP20.15■□□□□ 0.82
RBFOX1-215ENST00000553186 HOOK3Q86VS8 718 aa20.15■□□□□ 0.82
RBFOX1-215ENST00000553186 CCDC110Q8TBZ0 833 aa20.15■□□□□ 0.82
RBFOX1-215ENST00000553186 HTR3CQ8WXA8 447 aa20.15■□□□□ 0.82
RBFOX1-215ENST00000553186 KLC2Q9H0B6 622 aa20.15■□□□□ 0.82
RBFOX1-215ENST00000553186 C5orf60A6NFR6 353 aa20.15■□□□□ 0.82
RBFOX1-215ENST00000553186 CNPP09543 421 aaKnown RBP20.15■□□□□ 0.82
RBFOX1-215ENST00000553186 ATP2A2P16615 1042 aaKnown RBP20.15■□□□□ 0.82
RBFOX1-215ENST00000553186 ACTN2P35609 894 aa20.15■□□□□ 0.82
RBFOX1-215ENST00000553186 GAD2Q05329 585 aa20.15■□□□□ 0.82
RBFOX1-215ENST00000553186 ZNF844Q08AG5 666 aa20.15■□□□□ 0.82
RBFOX1-215ENST00000553186 SLC29A2Q14542 456 aa20.15■□□□□ 0.82
RBFOX1-215ENST00000553186 PDZD4Q76G19 769 aaPredicted RBP20.15■□□□□ 0.82
RBFOX1-215ENST00000553186 PDZD8Q8NEN9 1154 aa20.15■□□□□ 0.82
RBFOX1-215ENST00000553186 ZNF512Q96ME7 567 aaPredicted RBP20.15■□□□□ 0.82
RBFOX1-215ENST00000553186 RBM15Q96T37 977 aaKnown RBP eCLIP20.15■□□□□ 0.82
RBFOX1-215ENST00000553186 MAFFQ9ULX9 164 aa20.15■□□□□ 0.82
RBFOX1-215ENST00000553186 PRRG1O14668 218 aa20.14■□□□□ 0.81
RBFOX1-215ENST00000553186 OPA1O60313 960 aa20.14■□□□□ 0.81
RBFOX1-215ENST00000553186 TMEM63AO94886 807 aa20.14■□□□□ 0.81
RBFOX1-215ENST00000553186 BASP1P80723 227 aaKnown RBP20.14■□□□□ 0.81
RBFOX1-215ENST00000553186 CREMQ03060 361 aa20.14■□□□□ 0.81
RBFOX1-215ENST00000553186 RWDD4Q6NW29 188 aaKnown RBP20.14■□□□□ 0.81
RBFOX1-215ENST00000553186 C14orf80Q86SX3 495 aa20.14■□□□□ 0.81
RBFOX1-215ENST00000553186 P2RY11Q96G91 374 aa20.14■□□□□ 0.81
RBFOX1-215ENST00000553186 TRMT2BQ96GJ1 504 aaKnown RBP20.14■□□□□ 0.81
RBFOX1-215ENST00000553186 PPP1R12AO14974 1030 aaPredicted RBP20.14■□□□□ 0.81
RBFOX1-215ENST00000553186 TLL1O43897 1013 aa20.14■□□□□ 0.81
RBFOX1-215ENST00000553186 RING1Q06587 406 aa20.14■□□□□ 0.81
RBFOX1-215ENST00000553186 TWF1Q12792 350 aa20.14■□□□□ 0.81
RBFOX1-215ENST00000553186 KCNJ11Q14654 390 aa20.14■□□□□ 0.81
RBFOX1-215ENST00000553186 ZNF683Q8IZ20 524 aa20.14■□□□□ 0.81
RBFOX1-215ENST00000553186 RAB6BQ9NRW1 208 aa20.14■□□□□ 0.81
RBFOX1-215ENST00000553186 ZMYND8Q9ULU4 1186 aaPredicted RBP20.14■□□□□ 0.81
RBFOX1-215ENST00000553186 SSX2IPQ9Y2D8 614 aa20.14■□□□□ 0.81
RBFOX1-215ENST00000553186 INSL5Q9Y5Q6 135 aa20.14■□□□□ 0.81
RBFOX1-215ENST00000553186 SLC12A8A0AV02 714 aa20.13■□□□□ 0.81
RBFOX1-215ENST00000553186 E9PAM4 449 aa20.13■□□□□ 0.81
RBFOX1-215ENST00000553186 SMAPO00193 183 aa20.13■□□□□ 0.81
RBFOX1-215ENST00000553186 NCAM2O15394 837 aa20.13■□□□□ 0.81
RBFOX1-215ENST00000553186 APOEP02649 317 aa20.13■□□□□ 0.81
RBFOX1-215ENST00000553186 SHBGP04278 402 aa20.13■□□□□ 0.81
RBFOX1-215ENST00000553186 ELF1P32519 619 aa20.13■□□□□ 0.81
RBFOX1-215ENST00000553186 SERPINB6P35237 376 aa20.13■□□□□ 0.81
RBFOX1-215ENST00000553186 GALNT2Q10471 571 aa20.13■□□□□ 0.81
RBFOX1-215ENST00000553186 AP1B1Q10567 949 aa20.13■□□□□ 0.81
RBFOX1-215ENST00000553186 MS4A13Q5J8X5 152 aa20.13■□□□□ 0.81
RBFOX1-215ENST00000553186 CEP85LQ5SZL2 805 aa20.13■□□□□ 0.81
RBFOX1-215ENST00000553186 DENND2CQ68D51 928 aa20.13■□□□□ 0.81
RBFOX1-215ENST00000553186 ARL8AQ96BM9 186 aa20.13■□□□□ 0.81
RBFOX1-215ENST00000553186 TBC1D31Q96DN5 1066 aa20.13■□□□□ 0.81
RBFOX1-215ENST00000553186 CDK5RAP1Q96SZ6 601 aaKnown RBP20.13■□□□□ 0.81
RBFOX1-215ENST00000553186 ZMYND15Q9H091 742 aa20.13■□□□□ 0.81
RBFOX1-215ENST00000553186 GOLGA8MH3BSY2 632 aa20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 FGF10O15520 208 aaPredicted RBP20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 RNF40O75150 1001 aa20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 TTC4O95801 387 aa20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 TUBP50607 506 aa20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 KLHDC10Q6PID8 442 aa20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 C4orf22Q6V702 233 aa20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 CCNYQ8ND76 341 aa20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 BTN2A3PQ96KV6 586 aa20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 LRRC4CQ9HCJ2 640 aa20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 A0A0A0MRY4 1105 aa20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 CHADO15335 359 aa20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 TGM5O43548 720 aa20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 METTL18O95568 372 aa20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 ATP5C1P36542 298 aaKnown RBP20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 BMPR1AP36894 532 aa20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 MAGEA6P43360 314 aa20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 PPIDQ08752 370 aaKnown RBP20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 WASHC5Q12768 1159 aa20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 VEPH1Q14D04 833 aa20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 KYNUQ16719 465 aa20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 CEP128Q6ZU80 1094 aa20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 DNAJB7Q7Z6W7 309 aaPredicted RBP20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 HDAC11Q96DB2 347 aa20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 SPATA13Q96N96 652 aa20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 ETNK1Q9HBU6 452 aa20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 NINJ2Q9NZG7 142 aa20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 DNMT3LQ9UJW3 386 aa20.12■□□□□ 0.81
RBFOX1-215ENST00000553186 CXCL14O95715 111 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 SPATA31D3P0C874 917 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 MX2P20592 715 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 GARSP41250 739 aaKnown RBP20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 MAGEA4P43358 317 aa20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 EIF3BP55884 814 aaKnown RBP20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 AUHQ13825 339 aaKnown RBP20.11■□□□□ 0.81
RBFOX1-215ENST00000553186 TTMPQ5BVD1 217 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms