RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 PTPN9P43378 593 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 ACADSBP45954 432 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 SCNN1GP51170 649 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 CLCNKBP51801 687 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 GEMIN4P57678 1058 aaKnown RBP11.91□□□□□ -0.5
USP35-207ENST00000530546 SLC10A2Q12908 348 aaPredicted RBP11.91□□□□□ -0.5
USP35-207ENST00000530546 DSTYKQ6XUX3 929 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 ADAM32Q8TC27 787 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 ZNF398Q8TD17 642 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 PPP1R10Q96QC0 940 aaKnown RBP11.91□□□□□ -0.5
USP35-207ENST00000530546 SMC6Q96SB8 1091 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 PAAF1Q9BRP4 392 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 DNAI2Q9GZS0 605 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 PAK5Q9P286 719 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 PSMC3IPQ9P2W1 217 aaPredicted RBP11.91□□□□□ -0.5
USP35-207ENST00000530546 Q9Y3F1 56 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 KBTBD13C9JR72 458 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 XPO1O14980 1071 aaKnown RBP11.91□□□□□ -0.5
USP35-207ENST00000530546 CA4P22748 312 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 WARSP23381 471 aaKnown RBP11.91□□□□□ -0.5
USP35-207ENST00000530546 WDR4P57081 412 aaKnown RBP11.91□□□□□ -0.5
USP35-207ENST00000530546 SLC9A4Q6AI14 798 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 HFE2Q6ZVN8 426 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 SIX6OS1Q8N1H7 587 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 TOP6BLQ8N6T0 577 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 TRIB2Q92519 343 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 HSFY1Q96LI6 401 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 CSPG4P5Q96PW8 444 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 PAFAH2Q99487 392 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 ZNF670Q9BS34 389 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 DUSP16Q9BY84 665 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 KRT82Q9NSB4 513 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 GTF2IRD1Q9UHL9 959 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 ZFP69BQ9UJL9 534 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 ZNF232Q9UNY5 417 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 CBX6O95503 412 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 CHRNA1P02708 482 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 NPR3P17342 541 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 SLC18A1P54219 525 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 KCNJ11Q14654 390 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 EFHC2Q5JST6 749 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 EFHC1Q5JVL4 640 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 PAQR9Q6ZVX9 377 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 C10orf82Q8WW14 230 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 AGO3Q9H9G7 860 aaKnown RBP11.9□□□□□ -0.5
USP35-207ENST00000530546 MTMR10Q9NXD2 777 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 PFDN1O60925 122 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 TBX10O75333 385 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 THP07101 528 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 PABPC4LP0CB38 370 aaKnown RBP11.9□□□□□ -0.5
USP35-207ENST00000530546 LRPAP1P30533 357 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 RPA3P35244 121 aaPredicted RBP11.9□□□□□ -0.5
USP35-207ENST00000530546 THPOP40225 353 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 MATKP42679 507 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 TKTL1P51854 596 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 IRF5Q13568 498 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 SYPL2Q5VXT5 272 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 KCNT2Q6UVM3 1135 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 MARK2Q7KZI7 788 aaKnown RBP11.9□□□□□ -0.5
USP35-207ENST00000530546 RSPH3Q86UC2 560 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 ST13P4Q8IZP2 240 aaPredicted RBP11.9□□□□□ -0.5
USP35-207ENST00000530546 GSTCDQ8NEC7 633 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 HASPINQ8TF76 798 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 SPOCK2Q92563 424 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 KCNK16Q96T55 309 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 HNRNPABQ99729 332 aaKnown RBP11.9□□□□□ -0.5
USP35-207ENST00000530546 BTBD10Q9BSF8 475 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 C12orf65Q9H3J6 166 aaKnown RBP11.9□□□□□ -0.5
USP35-207ENST00000530546 CRTAC1Q9NQ79 661 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 ANGPTL2Q9UKU9 493 aa11.9□□□□□ -0.5
USP35-207ENST00000530546 MYBPHLA2RUH7 354 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 E7ESA3 106 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 M0QYT0 321 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 C2CD2LO14523 706 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 EDF1O60869 148 aaKnown RBP11.89□□□□□ -0.51
USP35-207ENST00000530546 KRT36O76013 467 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 METTL18O95568 372 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 POMCP01189 267 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 ASLP04424 464 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 KRT4P19013 534 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 FLT3LGP49771 235 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 USP46P62068 366 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 YWHAZP63104 245 aaKnown RBP11.89□□□□□ -0.51
USP35-207ENST00000530546 DEUP1Q05D60 604 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 NR1H3Q13133 447 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 DPYSL2Q16555 572 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 TAF1BQ53T94 588 aaPredicted RBP11.89□□□□□ -0.51
USP35-207ENST00000530546 ACSBG2Q5FVE4 666 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 RFWD3Q6PCD5 774 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 CLEC20AQ6ZU45 233 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 TDRPQ86YL5 185 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 C3orf58Q8NDZ4 430 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 IRGQQ8WZA9 623 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 CENPIQ92674 756 aaPredicted RBP11.89□□□□□ -0.51
USP35-207ENST00000530546 MIPEPQ99797 713 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 C11orf84Q9BUA3 381 aaPredicted RBP11.89□□□□□ -0.51
USP35-207ENST00000530546 CADM1Q9BY67 442 aaKnown RBP11.89□□□□□ -0.51
USP35-207ENST00000530546 CEP41Q9BYV8 373 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 ACSS3Q9H6R3 686 aa11.89□□□□□ -0.51
USP35-207ENST00000530546 SPC25Q9HBM1 224 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms