RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 TMEM30AQ9NV96 361 aa14.18□□□□□ -0.14
LDLRAD3-202ENST00000524419 FBXW11Q9UKB1 542 aa14.18□□□□□ -0.14
LDLRAD3-202ENST00000524419 INPP5FQ9Y2H2 1132 aa14.18□□□□□ -0.14
LDLRAD3-202ENST00000524419 PCDHA11Q9Y5I1 949 aa14.18□□□□□ -0.14
LDLRAD3-202ENST00000524419 FRMPD3Q5JV73 1810 aa14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 DNAH12Q6ZR08 3092 aa14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 NLRC5Q86WI3 1866 aa14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 TMEM88BA6NKF7 163 aa14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 B3GAT3O94766 335 aa14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 ALDH1A1P00352 501 aa14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 F9P00740 461 aa14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 C1QAP02745 245 aa14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 MLNP12872 115 aa14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 PRKAR2AP13861 404 aaKnown RBP14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 CCND1P24385 295 aa14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 CST5P28325 142 aaPredicted RBP14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 SLC18A2Q05940 514 aa14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 TUSC3Q13454 348 aa14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 E2F5Q15329 346 aa14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 PARP6Q2NL67 630 aa14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 PAN2Q504Q3 1202 aaKnown RBP14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 KIF2BQ8N4N8 673 aa14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 PCSK9Q8NBP7 692 aaKnown RBP14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 C10orf82Q8WW14 230 aa14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 APBB2Q92870 758 aa14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 SERAC1Q96JX3 654 aa14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 RHOBTB2Q9BYZ6 727 aa14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 VPS11Q9H270 941 aa14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 EBF2Q9HAK2 575 aa14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 PLAC1Q9HBJ0 212 aa14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 CSNK1G1Q9HCP0 422 aa14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 SLCO1B3Q9NPD5 702 aa14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 CHKBQ9Y259 395 aa14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 THSD7BQ9C0I4 1608 aa14.17□□□□□ -0.14
LDLRAD3-202ENST00000524419 ARHGEF37A1IGU5 675 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 TRIM49D1C9J1S8 452 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 F5H423 210 aaPredicted RBP14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 WFS1O76024 890 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 SNRPAP09012 282 aaKnown RBP14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 BRCC3P46736 316 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 HCAR3P49019 387 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 NEK3P51956 506 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 IFRD2Q12894 506 aaPredicted RBP14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 FYB2Q5VWT5 728 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 CCSAPQ6IQ19 270 aaPredicted RBP14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 FAM171BQ6P995 826 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 PAXIP1Q6ZW49 1069 aaPredicted RBP14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 MPP5Q8N3R9 675 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 TBC1D31Q96DN5 1066 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 STAMBPL1Q96FJ0 436 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 TMEM237Q96Q45 408 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 TRIM62Q9BVG3 475 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 LRMDAQ9H2I8 198 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 PRDM12Q9H4Q4 367 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 DMAP1Q9NPF5 467 aaPredicted RBP14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 SLC17A7Q9P2U7 560 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 NR2E3Q9Y5X4 410 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 COL4A4P53420 1690 aaPredicted RBP14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 FAM159BA6NKW6 160 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 CXorf49A8MYA2 514 aaPredicted RBP14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 FAM72CH0Y354 149 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 M0QZQ0 153 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 KRT38O76015 456 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 PYGBP11216 843 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 ERCC2P18074 760 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 BDNFP23560 247 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 ZNF135P52742 658 aaPredicted RBP14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 SEMA3BQ13214 749 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 MAPRE1Q15691 268 aaKnown RBP14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 FAM26DQ5JW98 314 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 FAM72AQ5TYM5 149 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 FAM72DQ6L9T8 149 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 LRRC8BQ6P9F7 803 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 BHLHA9Q7RTU4 235 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 OTOAQ7RTW8 1153 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 CTU1Q7Z7A3 348 aaKnown RBP14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 FAM72BQ86X60 149 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 THEM5Q8N1Q8 247 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 NETO2Q8NC67 525 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 GIMAP7Q8NHV1 300 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 AGAP11Q8TF27 550 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 HASPINQ8TF76 798 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 EDEM1Q92611 657 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 INPP5DQ92835 1189 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 ERP27Q96DN0 273 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 MTBPQ96DY7 904 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 EPAS1Q99814 870 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 IQCGQ9H095 443 aaKnown RBP14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 TRIM33Q9UPN9 1127 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 STK38LQ9Y2H1 464 aa14.16□□□□□ -0.14
LDLRAD3-202ENST00000524419 C2CD2LO14523 706 aa14.15□□□□□ -0.14
LDLRAD3-202ENST00000524419 COPEO14579 308 aa14.15□□□□□ -0.14
LDLRAD3-202ENST00000524419 FAM155BO75949 473 aa14.15□□□□□ -0.14
LDLRAD3-202ENST00000524419 TROVE2P10155 538 aaKnown RBP eCLIP14.15□□□□□ -0.14
LDLRAD3-202ENST00000524419 PSMB4P28070 264 aa14.15□□□□□ -0.14
LDLRAD3-202ENST00000524419 GRIA1P42261 906 aa14.15□□□□□ -0.14
LDLRAD3-202ENST00000524419 SERPINB9P50453 376 aa14.15□□□□□ -0.14
LDLRAD3-202ENST00000524419 TSPY1Q01534 308 aa14.15□□□□□ -0.14
LDLRAD3-202ENST00000524419 ITGA7Q13683 1181 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms