RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 SCAMP3O14828 347 aaKnown RBP6.41□□□□□ -1.38
CLK1-210ENST00000473565 SEC24AO95486 1093 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 F9P00740 461 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 SPATA31D3P0C874 917 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 YWHAQP27348 245 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 GJA8P48165 433 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 SKOR1P84550 965 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 DMTNQ08495 405 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 EIF4EBP2Q13542 120 aaPredicted RBP6.41□□□□□ -1.38
CLK1-210ENST00000473565 PRKD1Q15139 912 aaPredicted RBP6.41□□□□□ -1.38
CLK1-210ENST00000473565 C6orf118Q5T5N4 469 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 KIAA1841Q6NSI8 718 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 LRRC31Q6UY01 552 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 SPATA31D4Q6ZUB0 917 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 C3orf62Q6ZUJ4 267 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 ZNF534Q76KX8 674 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 PCGF5Q86SE9 256 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 CIR1Q86X95 450 aaPredicted RBP6.41□□□□□ -1.38
CLK1-210ENST00000473565 COLGALT1Q8NBJ5 622 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 ARHGEF2Q92974 986 aaKnown RBP6.41□□□□□ -1.38
CLK1-210ENST00000473565 PGM2Q96G03 612 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 EPAS1Q99814 870 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 TMEM175Q9BSA9 504 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 KLC2Q9H0B6 622 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 PPANQ9NQ55 473 aaKnown RBP6.41□□□□□ -1.38
CLK1-210ENST00000473565 RCOR3Q9P2K3 495 aaPredicted RBP6.41□□□□□ -1.38
CLK1-210ENST00000473565 VANGL2Q9ULK5 521 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 NEU3Q9UQ49 428 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 SCML2Q9UQR0 700 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 HS3ST4Q9Y661 456 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 PLXNA3P51805 1871 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 COL4A4P53420 1690 aaPredicted RBP6.41□□□□□ -1.38
CLK1-210ENST00000473565 A0A087WUV0 522 aaPredicted RBP6.41□□□□□ -1.38
CLK1-210ENST00000473565 A0A0A0MRY4 1105 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 CFAP69A5D8W1 941 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 DFFAO00273 331 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 TRIM66O15016 1216 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 GCATO75600 419 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 RAG1P15918 1043 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 CCR1P32246 355 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 CA8P35219 290 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 MDH1P40925 334 aaKnown RBP6.41□□□□□ -1.38
CLK1-210ENST00000473565 ZBTB17Q13105 803 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 XRCC4Q13426 336 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 BTG3Q14201 252 aaPredicted RBP6.41□□□□□ -1.38
CLK1-210ENST00000473565 LRRC14Q15048 493 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 PDK1Q15118 436 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 C10orf120Q5SQS8 335 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 ARTNQ5T4W7 220 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 PIK3R6Q5UE93 754 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 FBXO46Q6PJ61 603 aaPredicted RBP6.41□□□□□ -1.38
CLK1-210ENST00000473565 TFAP2DQ7Z6R9 452 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 MON1AQ86VX9 555 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 RELL1Q8IUW5 271 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 PALM2Q8IXS6 379 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 SRRM1Q8IYB3 904 aaKnown RBP6.41□□□□□ -1.38
CLK1-210ENST00000473565 UNC5BQ8IZJ1 945 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 VPS52Q8N1B4 723 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 FBF1Q8TES7 1133 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 TOP1MTQ969P6 601 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 MYEOVQ96EZ4 313 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 SPATA13Q96N96 652 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 CLSTN3Q9BQT9 956 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 TMEM109Q9BVC6 243 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 ARHGEF38Q9NXL2 777 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 PSD3Q9NYI0 1048 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 RRN3Q9NYV6 651 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 UBP1Q9NZI7 540 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 TTLL3Q9Y4R7 772 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 REV3LO60673 3130 aa6.41□□□□□ -1.38
CLK1-210ENST00000473565 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.4□□□□□ -1.38
CLK1-210ENST00000473565 C5orf60A6NFR6 353 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 ZBBXA8MT70 800 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 CHADO15335 359 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 SHOX2O60902 331 aaPredicted RBP6.4□□□□□ -1.38
CLK1-210ENST00000473565 HAPLN1P10915 354 aaPredicted RBP6.4□□□□□ -1.38
CLK1-210ENST00000473565 HSPA8P11142 646 aaKnown RBP6.4□□□□□ -1.38
CLK1-210ENST00000473565 CHN1P15882 459 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 PTPN3P26045 913 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 LSP1P33241 339 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 IFNAR2P48551 515 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 TUBP50607 506 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 WDR5P61964 334 aaKnown RBP6.4□□□□□ -1.38
CLK1-210ENST00000473565 MPP2Q14168 576 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 USP41Q3LFD5 358 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 ANKS3Q6ZW76 656 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 PID1Q7Z2X4 250 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 PRPF39Q86UA1 669 aaKnown RBP6.4□□□□□ -1.38
CLK1-210ENST00000473565 SCML4Q8N228 414 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 ANKRD42Q8N9B4 389 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 ZNF419Q96HQ0 510 aaPredicted RBP6.4□□□□□ -1.38
CLK1-210ENST00000473565 APOL2Q9BQE5 337 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 FOXP3Q9BZS1 431 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 PLAC1Q9HBJ0 212 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 KLHL8Q9P2G9 620 aaPredicted RBP6.4□□□□□ -1.38
CLK1-210ENST00000473565 ZMYND8Q9ULU4 1186 aaPredicted RBP6.4□□□□□ -1.38
CLK1-210ENST00000473565 MAD1L1Q9Y6D9 718 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 PTPRSQ13332 1948 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 DOCK6Q96HP0 2047 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 NYNRINQ9P2P1 1898 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms