RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 ATXN3P54252 364 aaPredicted RBP12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 ABCE1P61221 599 aaKnown RBP12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 TTLL12Q14166 644 aaPredicted RBP12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 HSDL1Q3SXM5 330 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 ANKRD20A4Q4UJ75 823 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 PPP1R26Q5T8A7 1209 aaPredicted RBP12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 PAOXQ6QHF9 649 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 CDKL3Q8IVW4 592 aaPredicted RBP12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 NIM1KQ8IY84 436 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 DRAXINQ8NBI3 349 aaPredicted RBP12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 PPP4R1Q8TF05 950 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 CPB2Q96IY4 423 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 WRNIP1Q96S55 665 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 LGMNQ99538 433 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 R3HDMLQ9H3Y0 253 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 COG4Q9H9E3 785 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 SLC4A7Q9Y6M7 1214 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 COMMD3-BMI1R4GMX3 469 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 MCM3APO60318 1980 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 CITO14578 2027 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 ACKR2O00590 384 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 ARIH2O95376 493 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 PIM1P11309 404 aaPredicted RBP12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 SDC4P31431 198 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 MLH1P40692 756 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 RANBP1P43487 201 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 CHN2P52757 468 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 OAZ1P54368 228 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 INHBCP55103 352 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 BOLA3Q53S33 107 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 KBTBD6Q86V97 674 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 TTC30AQ86WT1 665 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 HACE1Q8IYU2 909 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 ARNTL2Q8WYA1 636 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 HPDLQ96IR7 371 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 MPP4Q96JB8 637 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 OR52B2Q96RD2 323 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 SYBUQ9NX95 663 aa12.06□□□□□ -0.48
PDZRN3-203ENST00000462146 HCRTO43612 131 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 STAG3L1P0CL83 205 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 SERPINB5P36952 375 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 CCR10P46092 362 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 PGGT1BP53609 377 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 MTTPP55157 894 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 SNAPC2Q13487 334 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 SEMA5AQ13591 1074 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 TBC1D25Q3MII6 688 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 FAM160B1Q5W0V3 765 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 STEAP4Q687X5 459 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 METTL25Q8N6Q8 603 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 CCDC185Q8N715 623 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 ADAM32Q8TC27 787 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 JADE3Q92613 823 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 OPTNQ96CV9 577 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 DCUN1D1Q96GG9 259 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 KCTD15Q96SI1 283 aaPredicted RBP12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 SIKE1Q9BRV8 207 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 ZNF670Q9BS34 389 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 CCDC28BQ9BUN5 200 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 PDGFDQ9GZP0 370 aaPredicted RBP12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 CXCL16Q9H2A7 254 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 DTLQ9NZJ0 730 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 HESX1Q9UBX0 185 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 DTNAQ9Y4J8 743 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 NME7Q9Y5B8 376 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 PAPSS1O43252 624 aaPredicted RBP12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 ALDH1A2O94788 518 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 PMLP29590 882 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 ALDH1A3P47895 512 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 IRF9Q00978 393 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 MBTD1Q05BQ5 628 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 KLF10Q13118 480 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 DLG2Q15700 870 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 NCBP2-AS2Q69YL0 99 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 HEATR6Q6AI08 1181 aaKnown RBP12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 CATSPERGQ6ZRH7 1159 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 NME8Q8N427 588 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 ICA1LQ8NDH6 482 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 CMTM5Q96DZ9 223 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 LENG8Q96PV6 779 aaPredicted RBP12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 FZD8Q9H461 694 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 STN1Q9H668 368 aaKnown RBP12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 TMPRSS4Q9NRS4 437 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 IRAK4Q9NWZ3 460 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 MAGED2Q9UNF1 606 aaPredicted RBP12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 AK5Q9Y6K8 562 aa12.05□□□□□ -0.48
PDZRN3-203ENST00000462146 NEMP1O14524 444 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 AIM2O14862 343 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 CASQ2O14958 399 aaPredicted RBP12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 AMHP03971 560 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 ALOX15P16050 662 aaPredicted RBP12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 GOT1P17174 413 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 TYK2P29597 1187 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 FDFT1P37268 417 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 DEUP1Q05D60 604 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 MXD4Q14582 209 aaPredicted RBP12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 OGFRL1Q5TC84 451 aaPredicted RBP12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 LCLAT1Q6UWP7 414 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 ACOT1Q86TX2 421 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms