RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 TMPRSS6Q8IU80 811 aa20.11■□□□□ 0.81
USP40-207ENST00000450940 PASD1Q8IV76 773 aa20.11■□□□□ 0.81
USP40-207ENST00000450940 ERLEC1Q96DZ1 483 aa20.11■□□□□ 0.81
USP40-207ENST00000450940 BTN2A3PQ96KV6 586 aa20.11■□□□□ 0.81
USP40-207ENST00000450940 LSM14BQ9BX40 385 aaKnown RBP20.11■□□□□ 0.81
USP40-207ENST00000450940 NUCKS1Q9H1E3 243 aaKnown RBP20.11■□□□□ 0.81
USP40-207ENST00000450940 PLCB1Q9NQ66 1216 aa20.11■□□□□ 0.81
USP40-207ENST00000450940 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.11■□□□□ 0.81
USP40-207ENST00000450940 PLA2G4CQ9UP65 541 aa20.11■□□□□ 0.81
USP40-207ENST00000450940 FHOD1Q9Y613 1164 aa20.11■□□□□ 0.81
USP40-207ENST00000450940 KCNU1A8MYU2 1149 aa20.1■□□□□ 0.81
USP40-207ENST00000450940 APOEP02649 317 aa20.1■□□□□ 0.81
USP40-207ENST00000450940 EPHX1P07099 455 aa20.1■□□□□ 0.81
USP40-207ENST00000450940 UCHL3P15374 230 aa20.1■□□□□ 0.81
USP40-207ENST00000450940 ITPKAP23677 461 aa20.1■□□□□ 0.81
USP40-207ENST00000450940 RPS24P62847 133 aaKnown RBP20.1■□□□□ 0.81
USP40-207ENST00000450940 CDK17Q00537 523 aa20.1■□□□□ 0.81
USP40-207ENST00000450940 ARID5AQ03989 594 aa20.1■□□□□ 0.81
USP40-207ENST00000450940 DCAF6Q58WW2 860 aa20.1■□□□□ 0.81
USP40-207ENST00000450940 PPM1JQ5JR12 505 aa20.1■□□□□ 0.81
USP40-207ENST00000450940 KIAA1324Q6UXG2 1013 aaKnown RBP20.1■□□□□ 0.81
USP40-207ENST00000450940 C11orf57Q6ZUT1 292 aaPredicted RBP20.1■□□□□ 0.81
USP40-207ENST00000450940 FAM183BPQ6ZVS7 135 aa20.1■□□□□ 0.81
USP40-207ENST00000450940 ARMCX6Q7L4S7 300 aa20.1■□□□□ 0.81
USP40-207ENST00000450940 SLC41A1Q8IVJ1 513 aa20.1■□□□□ 0.81
USP40-207ENST00000450940 DEFB106AQ8N104 65 aa20.1■□□□□ 0.81
USP40-207ENST00000450940 C1orf131Q8NDD1 294 aaKnown RBP20.1■□□□□ 0.81
USP40-207ENST00000450940 ZNF397Q8NF99 534 aaPredicted RBP20.1■□□□□ 0.81
USP40-207ENST00000450940 TTC17Q96AE7 1141 aa20.1■□□□□ 0.81
USP40-207ENST00000450940 CD93Q9NPY3 652 aa20.1■□□□□ 0.81
USP40-207ENST00000450940 WSB2Q9NYS7 404 aaPredicted RBP20.1■□□□□ 0.81
USP40-207ENST00000450940 XPO7Q9UIA9 1087 aaKnown RBP20.1■□□□□ 0.81
USP40-207ENST00000450940 TYW5A2RUC4 315 aaKnown RBP20.09■□□□□ 0.81
USP40-207ENST00000450940 CDX4O14627 284 aaPredicted RBP20.09■□□□□ 0.81
USP40-207ENST00000450940 ERBB2P04626 1255 aa20.09■□□□□ 0.81
USP40-207ENST00000450940 ATP5BP06576 529 aaKnown RBP20.09■□□□□ 0.81
USP40-207ENST00000450940 SLC2A3P11169 496 aa20.09■□□□□ 0.81
USP40-207ENST00000450940 CYP11B1P15538 503 aa20.09■□□□□ 0.81
USP40-207ENST00000450940 CD6P30203 668 aa20.09■□□□□ 0.81
USP40-207ENST00000450940 SLC6A3Q01959 620 aa20.09■□□□□ 0.81
USP40-207ENST00000450940 PTPN20Q4JDL3 420 aa20.09■□□□□ 0.81
USP40-207ENST00000450940 TRIM61Q5EBN2 209 aa20.09■□□□□ 0.81
USP40-207ENST00000450940 SLC26A9Q7LBE3 791 aa20.09■□□□□ 0.81
USP40-207ENST00000450940 ZDHHC17Q8IUH5 632 aa20.09■□□□□ 0.81
USP40-207ENST00000450940 MFN1Q8IWA4 741 aa20.09■□□□□ 0.81
USP40-207ENST00000450940 OR2T3Q8NH03 318 aa20.09■□□□□ 0.81
USP40-207ENST00000450940 CEP76Q8TAP6 659 aa20.09■□□□□ 0.81
USP40-207ENST00000450940 CYB5D2Q8WUJ1 264 aa20.09■□□□□ 0.81
USP40-207ENST00000450940 SIPA1Q96FS4 1042 aa20.09■□□□□ 0.81
USP40-207ENST00000450940 PRMT1Q99873 361 aaKnown RBP20.09■□□□□ 0.81
USP40-207ENST00000450940 STK33Q9BYT3 514 aa20.09■□□□□ 0.81
USP40-207ENST00000450940 STIM2Q9P246 746 aa20.09■□□□□ 0.81
USP40-207ENST00000450940 INTS6Q9UL03 887 aaKnown RBP20.09■□□□□ 0.81
USP40-207ENST00000450940 C4orf47A7E2U8 309 aa20.08■□□□□ 0.81
USP40-207ENST00000450940 MOCS2O96007 188 aaPredicted RBP20.08■□□□□ 0.81
USP40-207ENST00000450940 POLR2EP19388 210 aaKnown RBP20.08■□□□□ 0.81
USP40-207ENST00000450940 TACR2P21452 398 aa20.08■□□□□ 0.81
USP40-207ENST00000450940 GABRB2P47870 512 aa20.08■□□□□ 0.81
USP40-207ENST00000450940 TPMTP51580 245 aa20.08■□□□□ 0.81
USP40-207ENST00000450940 LMAN2Q12907 356 aa20.08■□□□□ 0.81
USP40-207ENST00000450940 RAPGEF1Q13905 1077 aa20.08■□□□□ 0.81
USP40-207ENST00000450940 RABEPKQ7Z6M1 372 aa20.08■□□□□ 0.81
USP40-207ENST00000450940 DEFB119Q8N690 84 aa20.08■□□□□ 0.81
USP40-207ENST00000450940 ATP6V0D2Q8N8Y2 350 aa20.08■□□□□ 0.81
USP40-207ENST00000450940 TMEM35BQ8NCS4 154 aa20.08■□□□□ 0.81
USP40-207ENST00000450940 PRCCQ92733 491 aaPredicted RBP20.08■□□□□ 0.81
USP40-207ENST00000450940 FBRSQ9HAH7 460 aa20.08■□□□□ 0.81
USP40-207ENST00000450940 TMEM9BQ9NQ34 198 aa20.08■□□□□ 0.81
USP40-207ENST00000450940 TAB2Q9NYJ8 693 aa20.08■□□□□ 0.81
USP40-207ENST00000450940 CEP83Q9Y592 693 aa20.08■□□□□ 0.81
USP40-207ENST00000450940 PCDH15Q96QU1 1955 aa20.08■□□□□ 0.8
USP40-207ENST00000450940 ADAMTS9Q9P2N4 1935 aa20.08■□□□□ 0.8
USP40-207ENST00000450940 CACNA1EQ15878 2313 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 PES1O00541 588 aaKnown RBP20.07■□□□□ 0.8
USP40-207ENST00000450940 NDUFS2O75306 463 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 LUC7L3O95232 432 aaKnown RBP20.07■□□□□ 0.8
USP40-207ENST00000450940 ASLP04424 464 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 ADRB1P08588 477 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 HLA-EP13747 358 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 OXTRP30559 389 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 CCR1P32246 355 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 NOS2P35228 1153 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 SCNN1AP37088 669 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 ARID5BQ14865 1188 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 KRT31Q15323 416 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 DUOXA1Q1HG43 343 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 FNDC3BQ53EP0 1204 aaKnown RBP20.07■□□□□ 0.8
USP40-207ENST00000450940 FSCBQ5H9T9 825 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 RAP1GAP2Q684P5 730 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 OR6B2Q6IFH4 312 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 LGI2Q8N0V4 545 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 CFAP52Q8N1V2 620 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 KDM1BQ8NB78 822 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 CADM4Q8NFZ8 388 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 FOXJ1Q92949 421 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 TOE1Q96GM8 510 aaKnown RBP20.07■□□□□ 0.8
USP40-207ENST00000450940 MYO19Q96H55 970 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 HSPA12BQ96MM6 686 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 NUSAP1Q9BXS6 441 aaKnown RBP20.07■□□□□ 0.8
USP40-207ENST00000450940 GANQ9H2C0 597 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms