RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 AJAP1Q9UKB5 411 aaPredicted RBP9.64□□□□□ -0.87
NUP50-206ENST00000422489 TLR6Q9Y2C9 796 aa9.64□□□□□ -0.87
NUP50-206ENST00000422489 CEP83Q9Y592 693 aa9.64□□□□□ -0.87
NUP50-206ENST00000422489 HELZP42694 1942 aaKnown RBP9.64□□□□□ -0.87
NUP50-206ENST00000422489 FRYLO94915 3013 aa9.64□□□□□ -0.87
NUP50-206ENST00000422489 ATG2BQ96BY7 2078 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 GTPBP10A4D1E9 387 aaKnown RBP9.63□□□□□ -0.87
NUP50-206ENST00000422489 KCNJ18B7U540 433 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 SERPINF2P08697 491 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 DLDP09622 509 aaKnown RBP9.63□□□□□ -0.87
NUP50-206ENST00000422489 PNMA6AP0CW24 399 aaPredicted RBP9.63□□□□□ -0.87
NUP50-206ENST00000422489 GNSP15586 552 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 TACR2P21452 398 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 CLCN1P35523 988 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 TPMTP51580 245 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 COPAP53621 1224 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 SNX16P57768 344 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 PDCLQ13371 301 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 RAPGEF1Q13905 1077 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 KCNJ12Q14500 433 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 PLEKHG6Q3KR16 790 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 MS4A13Q5J8X5 152 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 EFHC1Q5JVL4 640 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 MPP7Q5T2T1 576 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 SH3PXD2AQ5TCZ1 1133 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 MMS22LQ6ZRQ5 1243 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 METTL3Q86U44 580 aaKnown RBP9.63□□□□□ -0.87
NUP50-206ENST00000422489 SLC47A2Q86VL8 602 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 CHSY1Q86X52 802 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 HDDC3Q8N4P3 179 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 ATP6V0D2Q8N8Y2 350 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 ZNF557Q8N988 423 aaPredicted RBP9.63□□□□□ -0.87
NUP50-206ENST00000422489 C1orf131Q8NDD1 294 aaKnown RBP9.63□□□□□ -0.87
NUP50-206ENST00000422489 DEFB124Q8NES8 71 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 OR2T3Q8NH03 318 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 FIBINQ8TAL6 211 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 WFDC5Q8TCV5 224 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 GANCQ8TET4 914 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 SHC3Q92529 594 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 MYEOVQ96EZ4 313 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 SLC39A13Q96H72 371 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 NOX5Q96PH1 765 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 CPXM1Q96SM3 734 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 NUP58Q9BVL2 599 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 IRX2Q9BZI1 471 aaPredicted RBP9.63□□□□□ -0.87
NUP50-206ENST00000422489 NUCKS1Q9H1E3 243 aaKnown RBP9.63□□□□□ -0.87
NUP50-206ENST00000422489 MTG2Q9H4K7 406 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 FAM204AQ9H8W3 233 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 SIX2Q9NPC8 291 aa9.63□□□□□ -0.87
NUP50-206ENST00000422489 SAMSN1Q9NSI8 373 aaKnown RBP9.63□□□□□ -0.87
NUP50-206ENST00000422489 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.63□□□□□ -0.87
NUP50-206ENST00000422489 XPO7Q9UIA9 1087 aaKnown RBP9.63□□□□□ -0.87
NUP50-206ENST00000422489 ARHGAP33O14559 1287 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 MOCS3O95396 460 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 DNTTP04053 509 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 SYPP08247 313 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 ABCB4P21439 1286 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 HOXD12P35452 270 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 CSKP41240 450 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 NUMBP49757 651 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 BPIFB4P59827 614 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 RNASE9P60153 205 aaKnown RBP9.62□□□□□ -0.87
NUP50-206ENST00000422489 RPS14P62263 151 aaKnown RBP9.62□□□□□ -0.87
NUP50-206ENST00000422489 PITX1P78337 314 aaPredicted RBP9.62□□□□□ -0.87
NUP50-206ENST00000422489 KCNMA1Q12791 1236 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 NME3Q13232 169 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 CDH18Q13634 790 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 DRAP1Q14919 205 aaPredicted RBP9.62□□□□□ -0.87
NUP50-206ENST00000422489 MEA1Q16626 185 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 PTPRNQ16849 979 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 FSCBQ5H9T9 825 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 DCAF12L1Q5VU92 463 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 C11orf57Q6ZUT1 292 aaPredicted RBP9.62□□□□□ -0.87
NUP50-206ENST00000422489 FAM183BPQ6ZVS7 135 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 BEND5Q7L4P6 421 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 RABEPKQ7Z6M1 372 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 KIAA0907Q7Z7F0 614 aaPredicted RBP9.62□□□□□ -0.87
NUP50-206ENST00000422489 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.62□□□□□ -0.87
NUP50-206ENST00000422489 OR2I1PQ8NGU4 316 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 BTN2A3PQ96KV6 586 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 PRICKLE1Q96MT3 831 aaPredicted RBP9.62□□□□□ -0.87
NUP50-206ENST00000422489 VPS16Q9H269 839 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 LHX5Q9H2C1 402 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 TMEM245Q9H330 911 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 SLC32A1Q9H598 525 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 PRSS16Q9NQE7 514 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 LMBRD1Q9NUN5 540 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 DDIT4Q9NX09 232 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 TAB2Q9NYJ8 693 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 KIAA1522Q9P206 1035 aaPredicted RBP9.62□□□□□ -0.87
NUP50-206ENST00000422489 USP36Q9P275 1121 aaKnown RBP9.62□□□□□ -0.87
NUP50-206ENST00000422489 SUSD2Q9UGT4 822 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 PCDHGC3Q9UN70 934 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 NCKAP1Q9Y2A7 1128 aa9.62□□□□□ -0.87
NUP50-206ENST00000422489 METTL12A8MUP2 240 aa9.61□□□□□ -0.87
NUP50-206ENST00000422489 KCNU1A8MYU2 1149 aa9.61□□□□□ -0.87
NUP50-206ENST00000422489 F5H5T6 163 aa9.61□□□□□ -0.87
NUP50-206ENST00000422489 OPHN1O60890 802 aa9.61□□□□□ -0.87
NUP50-206ENST00000422489 RNASEH1O60930 286 aaKnown RBP9.61□□□□□ -0.87
NUP50-206ENST00000422489 LUC7L3O95232 432 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms