RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 TLL2Q9Y6L7 1015 aa13.12□□□□□ -0.31
HERC3-203ENST00000407637 HMX2A2RU54 273 aa13.12□□□□□ -0.31
HERC3-203ENST00000407637 TBX3O15119 743 aa13.12□□□□□ -0.31
HERC3-203ENST00000407637 SPAG6O75602 509 aa13.12□□□□□ -0.31
HERC3-203ENST00000407637 KRT75O95678 551 aa13.12□□□□□ -0.31
HERC3-203ENST00000407637 SERPINB2P05120 415 aa13.12□□□□□ -0.31
HERC3-203ENST00000407637 ENO2P09104 434 aaPredicted RBP13.12□□□□□ -0.31
HERC3-203ENST00000407637 ME2P23368 584 aa13.12□□□□□ -0.31
HERC3-203ENST00000407637 SLC9B1Q4ZJI4 515 aa13.12□□□□□ -0.31
HERC3-203ENST00000407637 FAM47CQ5HY64 1035 aa13.12□□□□□ -0.31
HERC3-203ENST00000407637 KCNT2Q6UVM3 1135 aa13.12□□□□□ -0.31
HERC3-203ENST00000407637 CYP2U1Q7Z449 544 aa13.12□□□□□ -0.31
HERC3-203ENST00000407637 SNX29P2Q8IUI4 249 aa13.12□□□□□ -0.31
HERC3-203ENST00000407637 MMAAQ8IVH4 418 aaKnown RBP13.12□□□□□ -0.31
HERC3-203ENST00000407637 SIX6OS1Q8N1H7 587 aa13.12□□□□□ -0.31
HERC3-203ENST00000407637 SDR16C5Q8N3Y7 309 aa13.12□□□□□ -0.31
HERC3-203ENST00000407637 FAM71DQ8N9W8 422 aa13.12□□□□□ -0.31
HERC3-203ENST00000407637 MAELQ96JY0 434 aaKnown RBP13.12□□□□□ -0.31
HERC3-203ENST00000407637 SH3GL1Q99961 368 aa13.12□□□□□ -0.31
HERC3-203ENST00000407637 SMARCAD1Q9H4L7 1026 aa13.12□□□□□ -0.31
HERC3-203ENST00000407637 MRPL47Q9HD33 250 aaKnown RBP13.12□□□□□ -0.31
HERC3-203ENST00000407637 DUS2Q9NX74 493 aaKnown RBP13.12□□□□□ -0.31
HERC3-203ENST00000407637 MTMR4Q9NYA4 1195 aa13.12□□□□□ -0.31
HERC3-203ENST00000407637 EMCNQ9ULC0 261 aa13.12□□□□□ -0.31
HERC3-203ENST00000407637 N6AMT1Q9Y5N5 214 aa13.12□□□□□ -0.31
HERC3-203ENST00000407637 SNX13Q9Y5W8 968 aa13.12□□□□□ -0.31
HERC3-203ENST00000407637 PLIN4Q96Q06 1357 aa13.12□□□□□ -0.31
HERC3-203ENST00000407637 F8VP50 259 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 NOL3O60936 208 aaKnown RBP13.11□□□□□ -0.31
HERC3-203ENST00000407637 MAP4P27816 1152 aaKnown RBP13.11□□□□□ -0.31
HERC3-203ENST00000407637 PIK3R1P27986 724 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 RFC1P35251 1148 aaPredicted RBP13.11□□□□□ -0.31
HERC3-203ENST00000407637 GNL1P36915 607 aaPredicted RBP13.11□□□□□ -0.31
HERC3-203ENST00000407637 HPCAL1P37235 193 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 ETFBP38117 255 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 NSUN2Q08J23 767 aaKnown RBP eCLIP13.11□□□□□ -0.31
HERC3-203ENST00000407637 ZNF252P-AS1Q0IIN9 211 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 PGS1Q32NB8 556 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 LGSNQ5TDP6 509 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 MOXD1Q6UVY6 613 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 DSG4Q86SJ6 1040 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 TXNRD3Q86VQ6 643 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 CBWD2Q8IUF1 395 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 LILRB4Q8NHJ6 448 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 CRYGNQ8WXF5 182 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 GPR101Q96P66 508 aaPredicted RBP13.11□□□□□ -0.31
HERC3-203ENST00000407637 TBC1D22BQ9NU19 505 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 FOCADQ5VW36 1801 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 TRIM64BA6NI03 449 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 ACOT8O14734 319 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 JRKO75564 520 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 KCNH1O95259 989 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 LDHBP07195 334 aaKnown RBP13.11□□□□□ -0.31
HERC3-203ENST00000407637 GABRB2P47870 512 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 QARSP47897 775 aaKnown RBP13.11□□□□□ -0.31
HERC3-203ENST00000407637 NOVP48745 357 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 NEDD8Q15843 81 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 N4BP2L1Q5TBK1 243 aaPredicted RBP13.11□□□□□ -0.31
HERC3-203ENST00000407637 AGAP7PQ5VUJ5 663 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 KRT39Q6A163 491 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 RNF19BQ6ZMZ0 732 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 CPSF7Q8N684 471 aaKnown RBP13.11□□□□□ -0.31
HERC3-203ENST00000407637 ADAM32Q8TC27 787 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 ADAMTS16Q8TE57 1224 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 CELF1Q92879 486 aaKnown RBP13.11□□□□□ -0.31
HERC3-203ENST00000407637 FAR2Q96K12 515 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 STRA6Q9BX79 667 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 ATP11BQ9Y2G3 1177 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 FER1L6Q2WGJ9 1857 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 ITGB4P16144 1822 aa13.11□□□□□ -0.31
HERC3-203ENST00000407637 BCL10O95999 233 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 AMHP03971 560 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 SERPINE1P05121 402 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 CKMT2P17540 419 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 CCNA2P20248 432 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 OPRL1P41146 370 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 GPC3P51654 580 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 DNASE1L3Q13609 305 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 PCLAFQ15004 111 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 NHSL2Q5HYW2 709 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 C11orf74Q86VG3 221 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 C10orf107Q8IVU9 208 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 DAW1Q8N136 415 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 ATP6V0D2Q8N8Y2 350 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 GABPB2Q8TAK5 448 aaPredicted RBP13.1□□□□□ -0.31
HERC3-203ENST00000407637 FEZF2Q8TBJ5 459 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 AGR3Q8TD06 166 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 CEP295NLQ96MC4 621 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 FAM20AQ96MK3 541 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 OR52B2Q96RD2 323 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 HSD17B14Q9BPX1 270 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 C1orf50Q9BV19 199 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 RNPEPQ9H4A4 650 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 COG4Q9H9E3 785 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 NANOGQ9H9S0 305 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 WDR41Q9HAD4 459 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 PLAC1Q9HBJ0 212 aa13.1□□□□□ -0.31
HERC3-203ENST00000407637 DDX56Q9NY93 547 aaKnown RBP13.1□□□□□ -0.31
HERC3-203ENST00000407637 WRAP73Q9P2S5 460 aaPredicted RBP13.1□□□□□ -0.31
HERC3-203ENST00000407637 DNMT3BQ9UBC3 853 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms