RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 SUDS3Q9H7L9 328 aaPredicted RBP17.2■□□□□ 0.34
SIPA1-201ENST00000394224 TDRKHQ9Y2W6 561 aaKnown RBP17.2■□□□□ 0.34
SIPA1-201ENST00000394224 ZNF286BP0CG31 522 aa17.2■□□□□ 0.34
SIPA1-201ENST00000394224 ZNF143P52747 638 aaPredicted RBP17.2■□□□□ 0.34
SIPA1-201ENST00000394224 RALGDSQ12967 914 aa17.2■□□□□ 0.34
SIPA1-201ENST00000394224 MSLNQ13421 630 aaPredicted RBP17.2■□□□□ 0.34
SIPA1-201ENST00000394224 FBXO48Q5FWF7 155 aa17.2■□□□□ 0.34
SIPA1-201ENST00000394224 RCN3Q96D15 328 aa17.2■□□□□ 0.34
SIPA1-201ENST00000394224 CELF6Q96J87 481 aaKnown RBP17.2■□□□□ 0.34
SIPA1-201ENST00000394224 PCDHAC1Q9H158 963 aa17.2■□□□□ 0.34
SIPA1-201ENST00000394224 PDP2Q9P2J9 529 aa17.2■□□□□ 0.34
SIPA1-201ENST00000394224 HESX1Q9UBX0 185 aa17.2■□□□□ 0.34
SIPA1-201ENST00000394224 AP4E1Q9UPM8 1137 aa17.2■□□□□ 0.34
SIPA1-201ENST00000394224 A8MXQ7 604 aa17.2■□□□□ 0.34
SIPA1-201ENST00000394224 JUNP05412 331 aaKnown RBP17.2■□□□□ 0.34
SIPA1-201ENST00000394224 PPP2R3CQ969Q6 453 aa17.2■□□□□ 0.34
SIPA1-201ENST00000394224 C18orf25Q96B23 403 aaPredicted RBP17.2■□□□□ 0.34
SIPA1-201ENST00000394224 SLC45A3Q96JT2 553 aa17.2■□□□□ 0.34
SIPA1-201ENST00000394224 RPL10LQ96L21 214 aaKnown RBP17.2■□□□□ 0.34
SIPA1-201ENST00000394224 DCUN1D5Q9BTE7 237 aa17.2■□□□□ 0.34
SIPA1-201ENST00000394224 MRIQ9BWK5 157 aa17.2■□□□□ 0.34
SIPA1-201ENST00000394224 NRDE2Q9H7Z3 1164 aa17.2■□□□□ 0.34
SIPA1-201ENST00000394224 CAAP1Q9H8G2 361 aa17.2■□□□□ 0.34
SIPA1-201ENST00000394224 SPATA31C2B4DYI2 1134 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 CLDN5O00501 218 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 SERPINA6P08185 405 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 ITGA2BP08514 1039 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 CPA3P15088 417 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 TTLL12Q14166 644 aaPredicted RBP17.19■□□□□ 0.34
SIPA1-201ENST00000394224 KRT72Q14CN4 511 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 KIZQ2M2Z5 673 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 CERCAMQ5T4B2 595 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 CHSY1Q86X52 802 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 ZNF398Q8TD17 642 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 SIGLEC10Q96LC7 697 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 E7ESA3 106 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 DNAJA2O60884 412 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 XRCC1P18887 633 aaPredicted RBP17.19■□□□□ 0.34
SIPA1-201ENST00000394224 GALK1P51570 392 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 TLR1Q15399 786 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 SH2D5Q6ZV89 423 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 MYLK4Q86YV6 388 aaPredicted RBP17.19■□□□□ 0.34
SIPA1-201ENST00000394224 BHLHE22Q8NFJ8 381 aaPredicted RBP17.19■□□□□ 0.34
SIPA1-201ENST00000394224 CDKL2Q92772 493 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 CPSF3Q9UKF6 684 aaKnown RBP17.19■□□□□ 0.34
SIPA1-201ENST00000394224 C10orf71Q711Q0 1435 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 HNRNPCL1O60812 293 aaKnown RBP17.19■□□□□ 0.34
SIPA1-201ENST00000394224 CLPTM1O96005 669 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 ITGAXP20702 1163 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 ALDH1A3P47895 512 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 INHBCP55103 352 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 ART3Q13508 389 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 PACS1Q6VY07 963 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 MOB2Q70IA6 237 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 SLC39A3Q9BRY0 314 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 PIF1Q9H611 641 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 GTSE1Q9NYZ3 720 aa17.19■□□□□ 0.34
SIPA1-201ENST00000394224 GMPR2Q9P2T1 348 aaKnown RBP17.19■□□□□ 0.34
SIPA1-201ENST00000394224 NEMP2A6NFY4 417 aa17.18■□□□□ 0.34
SIPA1-201ENST00000394224 RNF103O00237 685 aa17.18■□□□□ 0.34
SIPA1-201ENST00000394224 SRGAP2BP0DMP2 458 aa17.18■□□□□ 0.34
SIPA1-201ENST00000394224 HNRNPLP14866 589 aaKnown RBP eCLIP17.18■□□□□ 0.34
SIPA1-201ENST00000394224 TAP1Q03518 808 aa17.18■□□□□ 0.34
SIPA1-201ENST00000394224 TEX44Q53QW1 395 aa17.18■□□□□ 0.34
SIPA1-201ENST00000394224 MPZL3Q6UWV2 235 aa17.18■□□□□ 0.34
SIPA1-201ENST00000394224 MRPL1Q9BYD6 325 aaKnown RBP17.18■□□□□ 0.34
SIPA1-201ENST00000394224 VCX3BQ9H321 246 aa17.18■□□□□ 0.34
SIPA1-201ENST00000394224 EMCNQ9ULC0 261 aa17.18■□□□□ 0.34
SIPA1-201ENST00000394224 TIMM13Q9Y5L4 95 aaPredicted RBP17.18■□□□□ 0.34
SIPA1-201ENST00000394224 BPTFQ12830 3046 aa17.18■□□□□ 0.34
SIPA1-201ENST00000394224 SDR42E2A6NKP2 422 aa17.18■□□□□ 0.34
SIPA1-201ENST00000394224 C2CD4BA6NLJ0 364 aa17.18■□□□□ 0.34
SIPA1-201ENST00000394224 FGF3P11487 239 aaPredicted RBP17.18■□□□□ 0.34
SIPA1-201ENST00000394224 VAV1P15498 845 aa17.18■□□□□ 0.34
SIPA1-201ENST00000394224 PTPRAP18433 802 aa17.18■□□□□ 0.34
SIPA1-201ENST00000394224 CDK7P50613 346 aa17.18■□□□□ 0.34
SIPA1-201ENST00000394224 THOP1P52888 689 aa17.18■□□□□ 0.34
SIPA1-201ENST00000394224 CDH15P55291 814 aa17.18■□□□□ 0.34
SIPA1-201ENST00000394224 IARS2Q9NSE4 1012 aaKnown RBP17.18■□□□□ 0.34
SIPA1-201ENST00000394224 LZTS1Q9Y250 596 aa17.18■□□□□ 0.34
SIPA1-201ENST00000394224 FNDC3AQ9Y2H6 1198 aaKnown RBP17.18■□□□□ 0.34
SIPA1-201ENST00000394224 ADGRA2Q96PE1 1338 aa17.18■□□□□ 0.34
SIPA1-201ENST00000394224 FARP2O94887 1054 aaPredicted RBP17.17■□□□□ 0.34
SIPA1-201ENST00000394224 ZBTB7AO95365 584 aa17.17■□□□□ 0.34
SIPA1-201ENST00000394224 GMPSP49915 693 aaPredicted RBP17.17■□□□□ 0.34
SIPA1-201ENST00000394224 HDAC4P56524 1084 aa17.17■□□□□ 0.34
SIPA1-201ENST00000394224 TTC30AQ86WT1 665 aa17.17■□□□□ 0.34
SIPA1-201ENST00000394224 LRRC43Q8N309 656 aa17.17■□□□□ 0.34
SIPA1-201ENST00000394224 TDRD5Q8NAT2 981 aaKnown RBP17.17■□□□□ 0.34
SIPA1-201ENST00000394224 SEPT1Q8WYJ6 367 aa17.17■□□□□ 0.34
SIPA1-201ENST00000394224 GALNT8Q9NY28 637 aa17.17■□□□□ 0.34
SIPA1-201ENST00000394224 ZNF711Q9Y462 761 aa17.17■□□□□ 0.34
SIPA1-201ENST00000394224 GSTA2P09210 222 aa17.17■□□□□ 0.34
SIPA1-201ENST00000394224 COX4I1P13073 169 aa17.17■□□□□ 0.34
SIPA1-201ENST00000394224 LMO2P25791 158 aa17.17■□□□□ 0.34
SIPA1-201ENST00000394224 NDUFV1P49821 464 aa17.17■□□□□ 0.34
SIPA1-201ENST00000394224 PCLAFQ15004 111 aa17.17■□□□□ 0.34
SIPA1-201ENST00000394224 TRIM42Q8IWZ5 723 aa17.17■□□□□ 0.34
SIPA1-201ENST00000394224 RYBPQ8N488 228 aaPredicted RBP17.17■□□□□ 0.34
SIPA1-201ENST00000394224 CDHR1Q96JP9 859 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms