RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 ZNF222Q9UK12 451 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 SHOC2Q9UQ13 582 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 MYRFQ9Y2G1 1151 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 ARHGEF40Q8TER5 1519 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 MAGEB2O15479 319 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 KRT6BP04259 564 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 ENO2P09104 434 aaPredicted RBP17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 CCDC130P13994 396 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 KRT6CP48668 564 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 TTI2Q6NXR4 508 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 KCND2Q9NZV8 630 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 SIK3Q9Y2K2 1263 aa17.16■□□□□ 0.34
TSPAN3-201ENST00000267970 NTRK1P04629 796 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 IL6P05231 212 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 ZNF470Q6ECI4 717 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 POMGNT2Q8NAT1 580 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 VPS33AQ96AX1 596 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 PLEKHG4BQ96PX9 1271 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 ADAM30Q9UKF2 790 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 MROH7Q68CQ1 1323 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 AREL1O15033 823 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 RARAP10276 462 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 MSX2P35548 267 aaPredicted RBP17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 FSTL1Q12841 308 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 RABL6Q3YEC7 729 aaPredicted RBP17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 ERMARDQ5T6L9 678 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 C3orf20Q8ND61 904 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 FAR2Q96K12 515 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 CAMKK2Q96RR4 588 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 ACP6Q9NPH0 428 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 TMEM51Q9NW97 253 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 DSEQ9UL01 958 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 FAM50BQ9Y247 325 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 EFR3BQ9Y2G0 817 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 C15orf41Q9Y2V0 281 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 ERVK-9P63128 1117 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 LY6KQ17RY6 165 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 PPP1R26Q5T8A7 1209 aaPredicted RBP17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 TMEM176AQ96HP8 235 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 L2HGDHQ9H9P8 463 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 OR6B1O95007 311 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 CARTPTQ16568 116 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 MTSS1LQ765P7 747 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 LINC00116Q8NCU8 138 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 CCL15-CCL14A0A0B4J2E2 113 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 EFCAB10A6NFE3 127 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 CHURC1-FNTBB4DL54 471 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 BTN3A1O00481 513 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 MYL12BO14950 172 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 TM9SF1O15321 606 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 MTSS1O43312 755 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 FKBP6O75344 327 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 CCR1P32246 355 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 ELF3P78545 371 aaPredicted RBP17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 TOMM20Q15388 145 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 CCL15Q16663 113 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 TMC3Q7Z5M5 1100 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 DEFB128Q7Z7B8 93 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 NYAP2Q9P242 653 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 TISP43B9A030 160 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 TPP1O14773 563 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 MICAL2O94851 1124 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 MAPK1P28482 360 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 CTXN3Q4LDR2 81 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 TTMPQ5BVD1 217 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 IL27RAQ6UWB1 636 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 OSMRQ99650 979 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 CCDC3Q9BQI4 270 aa17.15■□□□□ 0.34
TSPAN3-201ENST00000267970 A0A087WZ62 844 aa17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 A0A096LPK6 155 aa17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 SYNCRIPO60506 623 aaKnown RBP17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 VDRP11473 427 aa17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 PTSQ03393 145 aa17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 EPS8Q12929 822 aa17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 ITFG1Q8TB96 612 aa17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 CCDC126Q96EE4 140 aa17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 FDXACB1Q9BRP7 624 aaPredicted RBP17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 OSBPL6Q9BZF3 934 aa17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 NDOR1Q9UHB4 597 aa17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 C2CD2Q9Y426 696 aa17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 LSM1O15116 133 aaKnown RBP17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 TPBGLP0DKB5 382 aa17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 MYL4P12829 197 aa17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 GRK4P32298 578 aa17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 IDH2P48735 452 aaKnown RBP17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 RBBP4Q09028 425 aa17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 SBK1Q52WX2 424 aa17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 FAM126BQ8IXS8 530 aa17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 FBXO39Q8N4B4 442 aa17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 ZNF671Q8TAW3 534 aa17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 LDLRP01130 860 aa17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 POU5F1Q01860 360 aaKnown RBP17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 SNAPC2Q13487 334 aa17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 LPIN1Q14693 890 aa17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 ATAD3BQ5T9A4 648 aa17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 CCSAPQ6IQ19 270 aaPredicted RBP17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 STX12Q86Y82 276 aa17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 TMPRSS6Q8IU80 811 aa17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 CLIP3Q96DZ5 547 aa17.14■□□□□ 0.33
TSPAN3-201ENST00000267970 CHST7Q9NS84 486 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms