RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 STMN4Q9H169 189 aaPredicted RBP23.37■■□□□ 1.33
CDX1-201ENST00000231656 RCOR3Q9P2K3 495 aaPredicted RBP23.37■■□□□ 1.33
CDX1-201ENST00000231656 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.36■■□□□ 1.33
CDX1-201ENST00000231656 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.36■■□□□ 1.33
CDX1-201ENST00000231656 CFAP69A5D8W1 941 aa23.36■■□□□ 1.33
CDX1-201ENST00000231656 M0QYT0 321 aa23.36■■□□□ 1.33
CDX1-201ENST00000231656 SMAPO00193 183 aa23.36■■□□□ 1.33
CDX1-201ENST00000231656 GRM6O15303 877 aa23.36■■□□□ 1.33
CDX1-201ENST00000231656 CSPG5O95196 566 aa23.36■■□□□ 1.33
CDX1-201ENST00000231656 NCAM1P13591 858 aa23.36■■□□□ 1.33
CDX1-201ENST00000231656 ERVK-21P61565 698 aa23.36■■□□□ 1.33
CDX1-201ENST00000231656 YWHAGP61981 247 aaKnown RBP eCLIP23.36■■□□□ 1.33
CDX1-201ENST00000231656 GAD2Q05329 585 aa23.36■■□□□ 1.33
CDX1-201ENST00000231656 PLPP4Q5VZY2 271 aa23.36■■□□□ 1.33
CDX1-201ENST00000231656 TCEAL8Q8IYN2 117 aa23.36■■□□□ 1.33
CDX1-201ENST00000231656 PYROXD2Q8N2H3 581 aa23.36■■□□□ 1.33
CDX1-201ENST00000231656 MRPL43Q8N983 215 aaKnown RBP23.36■■□□□ 1.33
CDX1-201ENST00000231656 EDEM1Q92611 657 aa23.36■■□□□ 1.33
CDX1-201ENST00000231656 KLHL5Q96PQ7 755 aa23.36■■□□□ 1.33
CDX1-201ENST00000231656 MAFFQ9ULX9 164 aa23.36■■□□□ 1.33
CDX1-201ENST00000231656 TCRBV7S3A2A0A539 114 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 HIDE1A8MVS5 230 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 TMEM63AO94886 807 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 YWHAQP27348 245 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 ELF1P32519 619 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 PGFP49763 221 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 GBE1Q04446 702 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 SLC10A2Q12908 348 aaPredicted RBP23.35■■□□□ 1.33
CDX1-201ENST00000231656 STAT4Q14765 748 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 HIF1AQ16665 826 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 SCD5Q86SK9 330 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 MON1AQ86VX9 555 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 CNOT10Q9H9A5 744 aaKnown RBP23.35■■□□□ 1.33
CDX1-201ENST00000231656 COMMD8Q9NX08 183 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 YIPF1Q9Y548 306 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 TRANK1O15050 2925 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 PDE4DIPQ5VU43 2346 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 C2orf71A6NGG8 1288 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 SLC38A8A6NNN8 435 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 GOLGA8MH3BSY2 632 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 PRRG1O14668 218 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 KCNN4O15554 427 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 TGM5O43548 720 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 ADH1AP07327 375 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 GOT1P17174 413 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 RBL1P28749 1068 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 MMP13P45452 471 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 NR2C2P49116 596 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 DEUP1Q05D60 604 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 XRCC4Q13426 336 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 CAMK1Q14012 370 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 NCBP2-AS2Q69YL0 99 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 TAB3Q8N5C8 712 aaPredicted RBP23.35■■□□□ 1.33
CDX1-201ENST00000231656 TRIM62Q9BVG3 475 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 EMILIN2Q9BXX0 1053 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 ABCC13Q9NSE7 274 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 PIGVQ9NUD9 493 aa23.35■■□□□ 1.33
CDX1-201ENST00000231656 A0A087WUV0 522 aaPredicted RBP23.34■■□□□ 1.33
CDX1-201ENST00000231656 E7ESA3 106 aa23.34■■□□□ 1.33
CDX1-201ENST00000231656 MAP3K6O95382 1288 aa23.34■■□□□ 1.33
CDX1-201ENST00000231656 SPATA31D3P0C874 917 aa23.34■■□□□ 1.33
CDX1-201ENST00000231656 AMPD1P23109 780 aa23.34■■□□□ 1.33
CDX1-201ENST00000231656 PDIA2Q13087 525 aaKnown RBP23.34■■□□□ 1.33
CDX1-201ENST00000231656 FNBP1LQ5T0N5 605 aa23.34■■□□□ 1.33
CDX1-201ENST00000231656 SPATA31D4Q6ZUB0 917 aa23.34■■□□□ 1.33
CDX1-201ENST00000231656 BEND5Q7L4P6 421 aa23.34■■□□□ 1.33
CDX1-201ENST00000231656 CDKL3Q8IVW4 592 aaPredicted RBP23.34■■□□□ 1.33
CDX1-201ENST00000231656 PRDM16Q9HAZ2 1276 aa23.34■■□□□ 1.33
CDX1-201ENST00000231656 NMUR1Q9HB89 426 aa23.34■■□□□ 1.33
CDX1-201ENST00000231656 TMPRSS4Q9NRS4 437 aa23.34■■□□□ 1.33
CDX1-201ENST00000231656 PAK5Q9P286 719 aa23.34■■□□□ 1.33
CDX1-201ENST00000231656 LGALS13Q9UHV8 139 aa23.34■■□□□ 1.33
CDX1-201ENST00000231656 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.34■■□□□ 1.33
CDX1-201ENST00000231656 A0A1W2PQH9 124 aa23.33■■□□□ 1.33
CDX1-201ENST00000231656 SRRM3A6NNA2 597 aaPredicted RBP23.33■■□□□ 1.33
CDX1-201ENST00000231656 IVLP07476 585 aa23.33■■□□□ 1.33
CDX1-201ENST00000231656 ARL4AP40617 200 aa23.33■■□□□ 1.33
CDX1-201ENST00000231656 ALDH1A3P47895 512 aa23.33■■□□□ 1.33
CDX1-201ENST00000231656 ARL4CP56559 192 aa23.33■■□□□ 1.33
CDX1-201ENST00000231656 NME3Q13232 169 aa23.33■■□□□ 1.33
CDX1-201ENST00000231656 KCNJ11Q14654 390 aa23.33■■□□□ 1.33
CDX1-201ENST00000231656 BTBD8Q5XKL5 378 aa23.33■■□□□ 1.33
CDX1-201ENST00000231656 LILRA6Q6PI73 481 aa23.33■■□□□ 1.33
CDX1-201ENST00000231656 ZBED8Q8IZ13 594 aa23.33■■□□□ 1.33
CDX1-201ENST00000231656 SLC7A14Q8TBB6 771 aa23.33■■□□□ 1.33
CDX1-201ENST00000231656 MICAL1Q8TDZ2 1067 aa23.33■■□□□ 1.33
CDX1-201ENST00000231656 FBXO32Q969P5 355 aa23.33■■□□□ 1.33
CDX1-201ENST00000231656 TTLL2Q9BWV7 592 aa23.33■■□□□ 1.33
CDX1-201ENST00000231656 ETNK2Q9NVF9 386 aa23.33■■□□□ 1.33
CDX1-201ENST00000231656 RRN3Q9NYV6 651 aa23.33■■□□□ 1.33
CDX1-201ENST00000231656 GMIPQ9P107 970 aa23.33■■□□□ 1.33
CDX1-201ENST00000231656 XPO7Q9UIA9 1087 aaKnown RBP23.33■■□□□ 1.33
CDX1-201ENST00000231656 SYNJ2BP-COX16A0A087WUM0 186 aa23.32■■□□□ 1.32
CDX1-201ENST00000231656 H3BNC9 293 aa23.32■■□□□ 1.32
CDX1-201ENST00000231656 IRS1P35568 1242 aa23.32■■□□□ 1.32
CDX1-201ENST00000231656 BASP1P80723 227 aaKnown RBP23.32■■□□□ 1.32
CDX1-201ENST00000231656 TAF10Q12962 218 aa23.32■■□□□ 1.32
CDX1-201ENST00000231656 MSS51Q4VC12 460 aa23.32■■□□□ 1.32
CDX1-201ENST00000231656 SLC45A4Q5BKX6 768 aa23.32■■□□□ 1.32
CDX1-201ENST00000231656 HP1BP3Q5SSJ5 553 aaPredicted RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms